RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 TMEM70Q9BUB7 260 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 A0A096LNT2 108 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 IGKV3D-20A0A0C4DH25 116 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 LOC389332A0A1B0GUA5 103 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 RBAKDNA6NC62 111 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 SMKR1H3BMG3 65 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 CCL25O15444 150 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 LOXL1Q08397 574 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 MRPL51Q4U2R6 128 aaKnown RBP6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 MTURNQ8N3F0 131 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 BEX4Q9NWD9 120 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 TRAV26-1A0A087WT03 109 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 IGHV4-59P01825 116 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 IGLC3P0DOY3 106 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 IFI27P40305 119 aaPredicted RBP6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 UBE2V1Q13404 147 aa6.07□□□□□ -1.44
PDLIM5-204ENST00000380176 EPG5Q9HCE0 2579 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 SYS1-DBNDD2H3BUS1 97 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 GAS8-AS1O95177 125 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 CR1P17927 2039 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 ID1P41134 155 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 DEFB112Q30KQ8 113 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 OCIAD2Q56VL3 154 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 C10orf99Q6UWK7 81 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 OR4X2Q8NGF9 303 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 ADARB2-AS1A8MUL3 147 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 NDUFA4O00483 81 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 CRXO43186 299 aaPredicted RBP6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 NCR2O95944 276 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 IGLV1-40P01703 118 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 IGLL1P15814 213 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 FXYD7P58549 80 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 KRTAP10-9P60411 292 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 FOXE3Q13461 319 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 PRR9Q5T870 116 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 SAMD13Q5VXD3 122 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 PRSS3P2Q8NHM4 247 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 PRELID3AQ96N28 172 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 JMJD8Q96S16 334 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 U3KQK5 164 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 TEX15Q9BXT5 2789 aa6.06□□□□□ -1.44
PDLIM5-204ENST00000380176 IGKV3-7A0A075B6H7 116 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 A0A096LNJ9 63 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 K7ERU9 68 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 TSPAN13O95857 204 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 CFHR3Q02985 330 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 TMEM78Q5T7P6 136 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 C9orf47Q6ZRZ4 202 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 ZNF843Q8N446 348 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 USMG5Q96IX5 58 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 SIGLEC8Q9NYZ4 499 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 TP73-AS1Q9UF72 201 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 TRAV9-2A0A087WT02 112 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 MRPL53Q96EL3 112 aaKnown RBP6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 RNF185Q96GF1 192 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 PMCHL2Q9BQD1 86 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 OR4C46A6NHA9 309 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 OR11H12B2RN74 326 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 H3BUA1 57 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 NPYP01303 97 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 DSCR9P59020 149 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 C5orf47Q569G3 176 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 ORMDL3Q8N138 153 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 LINC01356Q8N9X3 169 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 OR11H1Q8NG94 326 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 OR11H2Q8NH07 326 aa6.05□□□□□ -1.44
PDLIM5-204ENST00000380176 SOCS3O14543 225 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 OR5AL1P0C617 328 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 COX6B1P14854 86 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 SLC25A16P16260 332 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 SRD5A1P18405 259 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 COL5A1-AS1Q5SY13 56 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 LCE2CQ5TA81 110 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 HIST2H2BCQ6DN03 193 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 HIST2H2BDQ6DRA6 164 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 FA2HQ7L5A8 372 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 ZNF738Q8NE65 137 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 CNFNQ9BYD5 112 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 NPFFR1Q9GZQ6 430 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 hDV102S1A0JD36 115 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 F6UB75 175 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 GATA3P23771 443 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 CKS2P33552 79 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 BATFQ16520 125 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 Q6ZN92 141 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 C9orf139Q6ZV77 190 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 OR10AG1Q8NH19 301 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 TMEM191AQ9H0A3 160 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 UQCR10Q9UDW1 63 aa6.04□□□□□ -1.44
PDLIM5-204ENST00000380176 IGHV7-4-1A0A0J9YVY3 117 aa6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 ZNF747Q9BV97 191 aa6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 MAP1LC3CQ9BXW4 147 aa6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 PEMTQ9UBM1 199 aa6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 NAV2Q8IVL1 2488 aa6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 SPRY2O43597 315 aa6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 GATA1P15976 413 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 HIST1H1AQ02539 215 aaPredicted RBP6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 KLHDC1Q8N7A1 406 aa6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 RHPN1-AS1Q9BWJ2 59 aa6.03□□□□□ -1.44
PDLIM5-204ENST00000380176 EVI2AP22794 236 aa6.02□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms