RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 SIVA1O15304 175 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 RPL11P62913 178 aaKnown RBP9.22□□□□□ -0.93
RFC3-201ENST00000380071 KIR3DS1Q14943 382 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 UFSP1Q6NVU6 142 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 ZFAND2AQ8N6M9 145 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 ATP6V0BQ99437 205 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 CSMD2Q7Z408 3487 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 H3BUT2 72 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 H3BUX3 64 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 NDUFA4O00483 81 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 SOCS3O14543 225 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 HSD52Q0P140 79 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 GTSCR1Q86UQ5 136 aa9.22□□□□□ -0.93
RFC3-201ENST00000380071 TMEM8BA6NDV4 472 aa9.21□□□□□ -0.93
RFC3-201ENST00000380071 C9orf118A6NHY6 69 aa9.21□□□□□ -0.93
RFC3-201ENST00000380071 PRSS47A8MTI9 375 aa9.21□□□□□ -0.93
RFC3-201ENST00000380071 H3BRM9 83 aa9.21□□□□□ -0.93
RFC3-201ENST00000380071 IGKCP01834 107 aa9.21□□□□□ -0.93
RFC3-201ENST00000380071 LAGE3Q14657 143 aa9.21□□□□□ -0.93
RFC3-201ENST00000380071 LINC00477Q96M19 166 aa9.21□□□□□ -0.93
RFC3-201ENST00000380071 PIMREGQ9BSJ6 248 aa9.21□□□□□ -0.93
RFC3-201ENST00000380071 A6NDN8 102 aa9.21□□□□□ -0.94
RFC3-201ENST00000380071 M0R381 172 aa9.21□□□□□ -0.94
RFC3-201ENST00000380071 IGHG2P01859 326 aa9.21□□□□□ -0.94
RFC3-201ENST00000380071 TM4SF20Q53R12 229 aa9.21□□□□□ -0.94
RFC3-201ENST00000380071 OR4X2Q8NGF9 303 aa9.21□□□□□ -0.94
RFC3-201ENST00000380071 VPS25Q9BRG1 176 aa9.21□□□□□ -0.94
RFC3-201ENST00000380071 TMEM160Q9NX00 188 aa9.21□□□□□ -0.94
RFC3-201ENST00000380071 CELSR2Q9HCU4 2923 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 SAP30O75446 220 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 PF4V1P10720 104 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 EDN2P20800 178 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 OR10J6PQ8NGY7 276 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 C10orf105Q8TEF2 133 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 RAB37Q96AX2 223 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 CCL19Q99731 98 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 IGHV4-30-2A0A087WSY4 118 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 A0A0G2JLM5 398 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 A6NDX4 124 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 SRD5A1P18405 259 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 ZC2HC1BQ5TFG8 222 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 MYOZ3Q8TDC0 251 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 MRPL35Q9NZE8 188 aaKnown RBP9.2□□□□□ -0.94
RFC3-201ENST00000380071 LENEPQ9Y5L5 61 aa9.2□□□□□ -0.94
RFC3-201ENST00000380071 SPG11Q96JI7 2443 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 GNRH2O43555 120 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 ATP5LO75964 103 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 RNASE4P34096 147 aaKnown RBP9.19□□□□□ -0.94
RFC3-201ENST00000380071 SRSF1Q07955 248 aaKnown RBP eCLIP9.19□□□□□ -0.94
RFC3-201ENST00000380071 ANXA2RQ3ZCQ2 193 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 TRAV21A0A0B4J279 112 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 OVOL1O14753 267 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 DPM2O94777 84 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 C14orf178Q8N769 122 aaPredicted RBP9.19□□□□□ -0.94
RFC3-201ENST00000380071 USMG5Q96IX5 58 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 AP1S3Q96PC3 154 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 SPOCK3Q9BQ16 436 aa9.19□□□□□ -0.94
RFC3-201ENST00000380071 K7EP34 96 aa9.18□□□□□ -0.94
RFC3-201ENST00000380071 AVPP01185 164 aa9.18□□□□□ -0.94
RFC3-201ENST00000380071 S100A4P26447 101 aaKnown RBP9.18□□□□□ -0.94
RFC3-201ENST00000380071 RPL39LQ96EH5 51 aaKnown RBP9.18□□□□□ -0.94
RFC3-201ENST00000380071 RHPN1-AS1Q9BWJ2 59 aa9.18□□□□□ -0.94
RFC3-201ENST00000380071 ATP5J2P56134 94 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 RASL10AQ92737 203 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 MRAP2Q96G30 205 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 FAM19A4Q96LR4 140 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 SMPXQ9UHP9 88 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 GTF2H5Q6ZYL4 71 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 MAPKAPK5-AS1Q8N8E1 139 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 SMIM2Q9BVW6 85 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 PHLDA3Q9Y5J5 127 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 CRYBG3Q68DQ2 2970 aa9.17□□□□□ -0.94
RFC3-201ENST00000380071 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.17□□□□□ -0.949e-11■■■■■ 41.1
RFC3-201ENST00000380071 K7ERU9 68 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 GCSHP23434 173 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 ASIPP42127 132 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 FXYD2P54710 66 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 COTL1Q14019 142 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 CLEC2AQ6UVW9 174 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 WFDC12Q8WWY7 111 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 AGRNO00468 2067 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 TRBV25-1A0A075B6N4 114 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 A0A087WX48 190 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 H3BUA1 57 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 TMEM95Q3KNT9 176 aa9.16□□□□□ -0.94
RFC3-201ENST00000380071 A0A1W2PPM0 123 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 BRI3O95415 125 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 IGLV1-40P01703 118 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 MSMBP08118 114 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 RNASE3P12724 160 aaKnown RBP9.15□□□□□ -0.94
RFC3-201ENST00000380071 SUMO2P61956 95 aaKnown RBP9.15□□□□□ -0.94
RFC3-201ENST00000380071 CHAC1Q9BUX1 264 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 DPH3P1Q9H4G8 78 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 K7EMI3 77 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 MGPP08493 103 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 HIGD1BQ9P298 99 aa9.15□□□□□ -0.94
RFC3-201ENST00000380071 MUC4Q99102 2169 aa9.14□□□□□ -0.95
RFC3-201ENST00000380071 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms