RNA–Protein interactions for RNA: ENST00000378904.4

LYSMD4-203, Transcript of LysM domain containing 4, humanhuman

BASIC

Gene LYSMD4, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-203ENST00000378904 SRIP30626 198 aa13.19□□□□□ -0.3
LYSMD4-203ENST00000378904 DEFB1P60022 68 aa13.19□□□□□ -0.3
LYSMD4-203ENST00000378904 SETD2Q9BYW2 2564 aaPredicted RBP13.19□□□□□ -0.3
LYSMD4-203ENST00000378904 K7EQG2 157 aa13.18□□□□□ -0.3
LYSMD4-203ENST00000378904 ZNF138P52744 262 aa13.18□□□□□ -0.3
LYSMD4-203ENST00000378904 KRTAP10-3P60369 221 aa13.18□□□□□ -0.3
LYSMD4-203ENST00000378904 CT83Q5H943 113 aa13.18□□□□□ -0.3
LYSMD4-203ENST00000378904 ORAOV1Q8WV07 137 aa13.18□□□□□ -0.3
LYSMD4-203ENST00000378904 ADARB2-AS1A8MUL3 147 aa13.18□□□□□ -0.3
LYSMD4-203ENST00000378904 OR10J6PQ8NGY7 276 aa13.18□□□□□ -0.3
LYSMD4-203ENST00000378904 IZUMO1RA6ND01 250 aa13.17□□□□□ -0.3
LYSMD4-203ENST00000378904 F6UB75 175 aa13.17□□□□□ -0.3
LYSMD4-203ENST00000378904 Q6ZN92 141 aa13.17□□□□□ -0.3
LYSMD4-203ENST00000378904 A8MWL6 223 aa13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 ZNF80P51504 273 aaPredicted RBP13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 HNRNPA3P51991 378 aaKnown RBP13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 NSUN5P1Q3KNT7 163 aa13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 FAM162BQ5T6X4 162 aa13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 OR2D3Q8NGH3 330 aa13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 MRPS16Q9Y3D3 137 aaKnown RBP13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 SH2D1AO60880 128 aa13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 C2CD3Q4AC94 2353 aa13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 OR8A1Q8NGG7 326 aa13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 DYNLRB2Q8TF09 96 aa13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 LINC00477Q96M19 166 aa13.16□□□□□ -0.3
LYSMD4-203ENST00000378904 APCSP02743 223 aa13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 ZNF688P0C7X2 276 aa13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 SNRPD3P62318 126 aaKnown RBP13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 HIST1H1AQ02539 215 aaPredicted RBP13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 MRPL54Q6P161 138 aaKnown RBP13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 RASL11AQ6T310 242 aa13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 FAM19A2Q8N3H0 131 aa13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 C18orf32Q8TCD1 76 aa13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 WNK1Q9H4A3 2382 aa13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 HIGD1CA8MV81 97 aa13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 PSMG4Q5JS54 123 aa13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 NUP35Q8NFH5 326 aa13.15□□□□□ -0.3
LYSMD4-203ENST00000378904 CCL25O15444 150 aa13.14□□□□□ -0.31
LYSMD4-203ENST00000378904 TSPOP30536 169 aa13.14□□□□□ -0.31
LYSMD4-203ENST00000378904 PCP4P48539 62 aa13.14□□□□□ -0.31
LYSMD4-203ENST00000378904 SLAQ13239 276 aa13.14□□□□□ -0.31
LYSMD4-203ENST00000378904 PMCHL1Q16048 86 aa13.14□□□□□ -0.31
LYSMD4-203ENST00000378904 RBPMS2Q6ZRY4 209 aaKnown RBP13.14□□□□□ -0.31
LYSMD4-203ENST00000378904 TMEM61Q8N0U2 210 aa13.14□□□□□ -0.31
LYSMD4-203ENST00000378904 DEFB114Q30KQ6 69 aa13.13□□□□□ -0.31
LYSMD4-203ENST00000378904 NDUFA11Q86Y39 141 aa13.13□□□□□ -0.31
LYSMD4-203ENST00000378904 GTSF1Q8WW33 167 aa13.13□□□□□ -0.31
LYSMD4-203ENST00000378904 GFRA4Q9GZZ7 299 aa13.13□□□□□ -0.31
LYSMD4-203ENST00000378904 LENEPQ9Y5L5 61 aa13.13□□□□□ -0.31
LYSMD4-203ENST00000378904 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.13□□□□□ -0.31
LYSMD4-203ENST00000378904 BORCS7Q96B45 105 aa13.13□□□□□ -0.31
LYSMD4-203ENST00000378904 C20orf202A1L168 122 aa13.12□□□□□ -0.31
LYSMD4-203ENST00000378904 FABP5P3A8MUU1 101 aa13.12□□□□□ -0.31
LYSMD4-203ENST00000378904 FAM231BA6NCW3 169 aa13.12□□□□□ -0.31
LYSMD4-203ENST00000378904 C21orf62-AS1Q17RA5 79 aa13.12□□□□□ -0.31
LYSMD4-203ENST00000378904 MAJINQ3KP22 176 aa13.12□□□□□ -0.31
LYSMD4-203ENST00000378904 GDF5OSQ5U4N7 250 aa13.12□□□□□ -0.31
LYSMD4-203ENST00000378904 TMEM189A5PLL7 270 aa13.11□□□□□ -0.31
LYSMD4-203ENST00000378904 CD300EQ496F6 205 aaPredicted RBP13.11□□□□□ -0.31
LYSMD4-203ENST00000378904 TRAV9-2A0A087WT02 112 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 TRAV2A0A0B4J234 112 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 EBLN2Q6P2I7 272 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 FAM19A4Q96LR4 140 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 SIGLEC8Q9NYZ4 499 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 COX11Q9Y6N1 276 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 TMSB15BA0A087X1C1 80 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 NTF3P20783 257 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 RBX1P62877 108 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 PRR9Q5T870 116 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 ATOH7Q8N100 152 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 PGLYRP4Q96LB8 373 aa13.1□□□□□ -0.31
LYSMD4-203ENST00000378904 PTTG1IPP53801 180 aa13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 FOXA3P55318 350 aaPredicted RBP13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 UBE2V1Q13404 147 aa13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 ANKRD39Q53RE8 183 aa13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 ZFAND2AQ8N6M9 145 aa13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 RNASE8Q8TDE3 154 aaKnown RBP13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 A0A0J9YX75 114 aa13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 J3KRW8 73 aa13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 K7EP13 123 aa13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 HINT1P49773 126 aaPredicted RBP13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 ALKBH7Q9BT30 221 aaPredicted RBP13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 SORL1Q92673 2214 aa13.09□□□□□ -0.31
LYSMD4-203ENST00000378904 TRBV7-9A0A0J9YWB2 115 aa13.08□□□□□ -0.32
LYSMD4-203ENST00000378904 ORM1P02763 201 aa13.08□□□□□ -0.32
LYSMD4-203ENST00000378904 LINC01559Q495D7 138 aa13.07□□□□□ -0.32
LYSMD4-203ENST00000378904 TRAV25A0A0B4J276 109 aa13.07□□□□□ -0.32
LYSMD4-203ENST00000378904 HSBP1O75506 76 aa13.07□□□□□ -0.32
LYSMD4-203ENST00000378904 IGLL1P15814 213 aa13.07□□□□□ -0.32
LYSMD4-203ENST00000378904 Q6ZQT7 251 aa13.07□□□□□ -0.32
LYSMD4-203ENST00000378904 ATP5L2Q7Z4Y8 100 aa13.07□□□□□ -0.32
LYSMD4-203ENST00000378904 SPAG8Q99932 426 aaPredicted RBP13.07□□□□□ -0.32
LYSMD4-203ENST00000378904 AGRNO00468 2067 aa13.07□□□□□ -0.32
LYSMD4-203ENST00000378904 DEFB131AP59861 70 aa13.06□□□□□ -0.32
LYSMD4-203ENST00000378904 RPS20P60866 119 aaKnown RBP13.06□□□□□ -0.32
LYSMD4-203ENST00000378904 FOXI2Q6ZQN5 318 aa13.06□□□□□ -0.32
LYSMD4-203ENST00000378904 Q6ZVH6 145 aa13.06□□□□□ -0.32
LYSMD4-203ENST00000378904 ZNF575Q86XF7 245 aa13.06□□□□□ -0.32
LYSMD4-203ENST00000378904 C11orf21Q9P2W6 132 aa13.06□□□□□ -0.32
LYSMD4-203ENST00000378904 A0A1B0GXF2 115 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms