RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 IGHV4-4A0A075B6R2 117 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 A1L4Q6 167 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 SPRY2O43597 315 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 IGKV2D-26A0A0A0MRZ7 120 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 H3BUX3 64 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 NDUFA4O00483 81 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 SAP30O75446 220 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 ADAMTSL5Q6ZMM2 481 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 ZFAND2AQ8N6M9 145 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 OR9G4Q8NGQ1 327 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 FOXC2Q99958 501 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 KLK15Q9H2R5 256 aa14.82□□□□□ -0.04
SHROOM1-202ENST00000378676 CFAP46Q8IYW2 2715 aa14.81□□□□□ -0.04
SHROOM1-202ENST00000378676 Q6ZS46 218 aa14.81□□□□□ -0.04
SHROOM1-202ENST00000378676 LCNL1Q6ZST4 164 aa14.81□□□□□ -0.04
SHROOM1-202ENST00000378676 C10orf105Q8TEF2 133 aa14.81□□□□□ -0.04
SHROOM1-202ENST00000378676 PRSS1P07477 247 aa14.81□□□□□ -0.04
SHROOM1-202ENST00000378676 RIPPLY3P57055 190 aa14.81□□□□□ -0.04
SHROOM1-202ENST00000378676 HHLA3Q9XRX5 114 aa14.81□□□□□ -0.04
SHROOM1-202ENST00000378676 SELENOKQ9Y6D0 94 aa14.81□□□□□ -0.04
SHROOM1-202ENST00000378676 HSD52Q0P140 79 aa14.8□□□□□ -0.04
SHROOM1-202ENST00000378676 CLEC2AQ6UVW9 174 aa14.8□□□□□ -0.04
SHROOM1-202ENST00000378676 TTTY13Q9BZ97 58 aa14.8□□□□□ -0.04
SHROOM1-202ENST00000378676 IGHG2P01859 326 aa14.8□□□□□ -0.04
SHROOM1-202ENST00000378676 CCL19Q99731 98 aa14.8□□□□□ -0.04
SHROOM1-202ENST00000378676 LENEPQ9Y5L5 61 aa14.8□□□□□ -0.04
SHROOM1-202ENST00000378676 A6NDX4 124 aa14.79□□□□□ -0.04
SHROOM1-202ENST00000378676 PRSS47A8MTI9 375 aa14.79□□□□□ -0.04
SHROOM1-202ENST00000378676 H3BRM9 83 aa14.79□□□□□ -0.04
SHROOM1-202ENST00000378676 SMIM17P0DL12 118 aa14.79□□□□□ -0.04
SHROOM1-202ENST00000378676 C9orf118A6NHY6 69 aa14.78□□□□□ -0.04
SHROOM1-202ENST00000378676 F6UB75 175 aa14.78□□□□□ -0.04
SHROOM1-202ENST00000378676 SIVA1O15304 175 aa14.78□□□□□ -0.04
SHROOM1-202ENST00000378676 BLCAPP62952 87 aa14.78□□□□□ -0.04
SHROOM1-202ENST00000378676 AP1S3Q96PC3 154 aa14.78□□□□□ -0.04
SHROOM1-202ENST00000378676 MAP1AP78559 2803 aaPredicted RBP14.78□□□□□ -0.04
SHROOM1-202ENST00000378676 IGHV4-30-2A0A087WSY4 118 aa14.78□□□□□ -0.04
SHROOM1-202ENST00000378676 PF4V1P10720 104 aa14.78□□□□□ -0.04
SHROOM1-202ENST00000378676 IGKV3-7A0A075B6H7 116 aa14.77□□□□□ -0.04
SHROOM1-202ENST00000378676 IGKCP01834 107 aa14.77□□□□□ -0.04
SHROOM1-202ENST00000378676 LAGE3Q14657 143 aa14.77□□□□□ -0.04
SHROOM1-202ENST00000378676 KIR3DS1Q14943 382 aa14.77□□□□□ -0.04
SHROOM1-202ENST00000378676 OR4X2Q8NGF9 303 aa14.77□□□□□ -0.04
SHROOM1-202ENST00000378676 OR10J6PQ8NGY7 276 aa14.77□□□□□ -0.04
SHROOM1-202ENST00000378676 LINC00477Q96M19 166 aa14.77□□□□□ -0.04
SHROOM1-202ENST00000378676 JMJD8Q96S16 334 aa14.77□□□□□ -0.04
SHROOM1-202ENST00000378676 A6NDN8 102 aa14.77□□□□□ -0.05
SHROOM1-202ENST00000378676 K7EP34 96 aa14.77□□□□□ -0.05
SHROOM1-202ENST00000378676 CELSR2Q9HCU4 2923 aa14.76□□□□□ -0.05
SHROOM1-202ENST00000378676 M0R381 172 aa14.76□□□□□ -0.05
SHROOM1-202ENST00000378676 OVOL1O14753 267 aa14.76□□□□□ -0.05
SHROOM1-202ENST00000378676 NEGR1Q7Z3B1 354 aa14.76□□□□□ -0.05
SHROOM1-202ENST00000378676 COL12A1Q99715 3063 aa14.76□□□□□ -0.05
SHROOM1-202ENST00000378676 EDN2P20800 178 aa14.76□□□□□ -0.05
SHROOM1-202ENST00000378676 GTSCR1Q86UQ5 136 aa14.76□□□□□ -0.05
SHROOM1-202ENST00000378676 USMG5Q96IX5 58 aa14.76□□□□□ -0.05
SHROOM1-202ENST00000378676 NAA38Q9BRA0 125 aaKnown RBP14.76□□□□□ -0.05
SHROOM1-202ENST00000378676 ATP5LO75964 103 aa14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 RPL11P62913 178 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 TM4SF20Q53R12 229 aa14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 TRAV21A0A0B4J279 112 aa14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 H3BUA1 57 aa14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 DPM2O94777 84 aa14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 ANXA2RQ3ZCQ2 193 aa14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 MRAP2Q96G30 205 aa14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 FAM19A4Q96LR4 140 aa14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 MRPL35Q9NZE8 188 aaKnown RBP14.75□□□□□ -0.05
SHROOM1-202ENST00000378676 MUC4Q99102 2169 aa14.74□□□□□ -0.05
SHROOM1-202ENST00000378676 NDUFS8O00217 210 aa14.74□□□□□ -0.05
SHROOM1-202ENST00000378676 BRI3O95415 125 aa14.74□□□□□ -0.05
SHROOM1-202ENST00000378676 ZC2HC1BQ5TFG8 222 aa14.74□□□□□ -0.05
SHROOM1-202ENST00000378676 SMIM2Q9BVW6 85 aa14.74□□□□□ -0.05
SHROOM1-202ENST00000378676 SPG11Q96JI7 2443 aa14.74□□□□□ -0.05
SHROOM1-202ENST00000378676 ATP5J2P56134 94 aa14.74□□□□□ -0.05
SHROOM1-202ENST00000378676 OR5A1Q8NGJ0 315 aa14.73□□□□□ -0.05
SHROOM1-202ENST00000378676 RNASE4P34096 147 aaKnown RBP14.73□□□□□ -0.05
SHROOM1-202ENST00000378676 RASL10AQ92737 203 aa14.73□□□□□ -0.05
SHROOM1-202ENST00000378676 RHPN1-AS1Q9BWJ2 59 aa14.73□□□□□ -0.05
SHROOM1-202ENST00000378676 TMEM160Q9NX00 188 aa14.73□□□□□ -0.05
SHROOM1-202ENST00000378676 FLNCQ14315 2725 aa14.72□□□□□ -0.05
SHROOM1-202ENST00000378676 AVPP01185 164 aa14.72□□□□□ -0.05
SHROOM1-202ENST00000378676 SRD5A1P18405 259 aa14.72□□□□□ -0.05
SHROOM1-202ENST00000378676 S100A4P26447 101 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-202ENST00000378676 ASIPP42127 132 aa14.72□□□□□ -0.05
SHROOM1-202ENST00000378676 MYOZ3Q8TDC0 251 aa14.72□□□□□ -0.05
SHROOM1-202ENST00000378676 RPL39LQ96EH5 51 aaKnown RBP14.72□□□□□ -0.05
SHROOM1-202ENST00000378676 SMPXQ9UHP9 88 aa14.72□□□□□ -0.05
SHROOM1-202ENST00000378676 H3BUT2 72 aa14.71□□□□□ -0.05
SHROOM1-202ENST00000378676 IGLV1-40P01703 118 aa14.71□□□□□ -0.05
SHROOM1-202ENST00000378676 MSMBP08118 114 aa14.71□□□□□ -0.05
SHROOM1-202ENST00000378676 TMEM95Q3KNT9 176 aa14.71□□□□□ -0.05
SHROOM1-202ENST00000378676 C14orf178Q8N769 122 aaPredicted RBP14.71□□□□□ -0.05
SHROOM1-202ENST00000378676 RAB37Q96AX2 223 aa14.71□□□□□ -0.05
SHROOM1-202ENST00000378676 GNRH2O43555 120 aa14.71□□□□□ -0.05
SHROOM1-202ENST00000378676 SRSF1Q07955 248 aaKnown RBP eCLIP14.71□□□□□ -0.051e-7■■□□□ 13.1
SHROOM1-202ENST00000378676 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.71□□□□□ -0.064e-13■■■□□ 19
SHROOM1-202ENST00000378676 SVIPQ8NHG7 77 aa14.7□□□□□ -0.06
SHROOM1-202ENST00000378676 DPH3P1Q9H4G8 78 aa14.7□□□□□ -0.06
SHROOM1-202ENST00000378676 RNF223E7ERA6 249 aa14.7□□□□□ -0.06
SHROOM1-202ENST00000378676 CFHR3Q02985 330 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms