RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 ATP6V0E1O15342 81 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 ZNF491Q8N8L2 437 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 IGLC7A0M8Q6 106 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 C9JAW5 83 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 NPYP01303 97 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 MALP21145 153 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 BOD1L2Q8IYS8 172 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 PIP4P2Q8N4L2 257 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 PRADC1Q9BSG0 188 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 UTP20O75691 2785 aaKnown RBP6.66□□□□□ -1.34
VPS36-201ENST00000378060 A0A1W2PPM0 123 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 OVOL3O00110 214 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 LGALS1P09382 135 aaKnown RBP6.66□□□□□ -1.34
VPS36-201ENST00000378060 PPDPFLQ8WWR9 84 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 C20orf78Q9BR46 151 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 TPSG1Q9NRR2 321 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 TP53TG1Q9Y2A0 90 aa6.66□□□□□ -1.34
VPS36-201ENST00000378060 K7EMI3 77 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 HLA-DRB4P13762 266 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 ETDBQ3ZM63 59 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 BRD3OSQ6XYD6 125 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 DEFB125Q8N687 156 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 HLA-DRB4X5D2U9 266 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 A0A087WWL8 130 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 SLC25A16P16260 332 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 C8orf86Q6ZUL3 223 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 MRPL35Q9NZE8 188 aaKnown RBP6.65□□□□□ -1.34
VPS36-201ENST00000378060 LENEPQ9Y5L5 61 aa6.65□□□□□ -1.34
VPS36-201ENST00000378060 S100A7L2Q5SY68 101 aa6.65□□□□□ -1.35
VPS36-201ENST00000378060 DTX2Q86UW9 622 aa6.65□□□□□ -1.35
VPS36-201ENST00000378060 BPESC1Q9GZL8 116 aa6.65□□□□□ -1.35
VPS36-201ENST00000378060 CHD6Q8TD26 2715 aa6.65□□□□□ -1.35
VPS36-201ENST00000378060 K7ENP7 123 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 NDUFA4O00483 81 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 NDUFS7O75251 213 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 LY6HO94772 140 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 C11orf1Q9H5F2 150 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 INSP01308 110 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 SRSF2Q01130 221 aaKnown RBP6.64□□□□□ -1.35
VPS36-201ENST00000378060 SPXQ9BT56 116 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 C1QTNF4Q9BXJ3 329 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 FAM215AQ9Y5M1 114 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 LHBP01229 141 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 GATA3P23771 443 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 C1orf122Q6ZSJ8 110 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 SDHAF1A6NFY7 115 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 LEPROTO15243 131 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 PAX4O43316 350 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 PRIMA1Q86XR5 153 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 SPANXDQ9BXN6 97 aa6.64□□□□□ -1.35
VPS36-201ENST00000378060 TRGV1A0A0A0MS02 117 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 A0A1W2PRX2 142 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 SHISA9B4DS77 424 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 CEND1Q8N111 149 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 MRPL53Q96EL3 112 aaKnown RBP6.63□□□□□ -1.35
VPS36-201ENST00000378060 C1orf159Q96HA4 380 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 VGLL1Q99990 258 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 I3L3M4 83 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 NUPR1O60356 82 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 LY6DQ14210 128 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 KLF12Q9Y4X4 402 aa6.63□□□□□ -1.35
VPS36-201ENST00000378060 A0A087WX48 190 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 IGHV3-73A0A0B4J1V6 119 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 IGHV2-70DA0A0C4DH43 119 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 RBAKDNA6NC62 111 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 INS-IGF2F8WCM5 200 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 DIAPH2-AS1Q14236 149 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 FAM120AOSQ5T036 256 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 DNAJC30Q96LL9 226 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 PRO1854Q9UHT4 67 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 ZNF493Q6ZR52 646 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 DKK4Q9UBT3 224 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 TSSC4Q9Y5U2 329 aaPredicted RBP6.62□□□□□ -1.35
VPS36-201ENST00000378060 TRAV8-3A0A0A6YYJ7 113 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 IGHV1-69DA0A0B4J2H0 117 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 G3V318 75 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 IGHV1-69P01742 117 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 INAFM2P0DMQ5 153 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 CDKN1BP46527 198 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 ANXA2RQ3ZCQ2 193 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 FLNCQ14315 2725 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 IGHV1OR15-1A0A075B7D0 117 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 PRR30Q53SZ7 412 aaPredicted RBP6.62□□□□□ -1.35
VPS36-201ENST00000378060 C6orf226Q5I0X4 101 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 LINC01545Q5VT33 79 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 JPT2Q9H910 190 aa6.62□□□□□ -1.35
VPS36-201ENST00000378060 ANKHD1Q8IWZ3 2542 aaKnown RBP6.61□□□□□ -1.35
VPS36-201ENST00000378060 GP9P14770 177 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 NPC2P61916 151 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 MAJINQ3KP22 176 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 GATD1Q8NB37 220 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 TNCP24821 2201 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 FAM167A-AS1Q96KT0 104 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 IGF2BP2-AS1Q96M15 143 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 DKK2Q9UBU2 259 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 KIAA1549Q9HCM3 1950 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 HTN3P15516 51 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 IGFL2Q6UWQ7 119 aa6.61□□□□□ -1.35
VPS36-201ENST00000378060 TRAV13-1A0A0B4J241 112 aa6.6□□□□□ -1.35
VPS36-201ENST00000378060 H3BMM0 161 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms