RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 H3BUX3 64 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 GAGE5Q13069 117 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 GAGE6Q13070 117 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 TCTEX1D4Q5JR98 221 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 PIP4P1Q86T03 277 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 G3V318 75 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 INSP01308 110 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 RNASE1P07998 156 aaKnown RBP6.82□□□□□ -1.32
PCDH9-202ENST00000377865 CTSGP08311 255 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 WT1P19544 449 aaPredicted RBP6.82□□□□□ -1.32
PCDH9-202ENST00000377865 CFAP161Q6P656 301 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 OVOL3O00110 214 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 IGLC6P0CF74 106 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 MSMPQ1L6U9 139 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 TM2D2Q9BX73 214 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 MSRB1Q9NZV6 116 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 HEATR1Q9H583 2144 aaKnown RBP6.82□□□□□ -1.32
PCDH9-202ENST00000377865 BAALCQ8WXS3 180 aa6.82□□□□□ -1.32
PCDH9-202ENST00000377865 IGHV1-69P01742 117 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 RTTNQ86VV8 2226 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 TMEM86BQ8N661 226 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 EXPH5Q8NEV8 1989 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 NDUFA12Q9UI09 145 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 TNRC6BQ9UPQ9 1833 aaKnown RBP6.81□□□□□ -1.32
PCDH9-202ENST00000377865 BUB3O43684 328 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 ACYP1P07311 99 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 IGHV3-73A0A0B4J1V6 119 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 TRGV2A0A075B6R0 118 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 CRYGBP07316 175 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 LOXL1Q08397 574 aaPredicted RBP6.81□□□□□ -1.32
PCDH9-202ENST00000377865 C16orf54Q6UWD8 224 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 SEM1Q6ZVN7 128 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 C1orf159Q96HA4 380 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 GAGE12JA6NER3 117 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 GAGE7O76087 117 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 GAGE12FP0CL80 117 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 GAGE12GP0CL81 117 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 GAGE12IP0CL82 117 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 GAGE4Q13068 117 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 C2orf91Q6ZV80 131 aa6.81□□□□□ -1.32
PCDH9-202ENST00000377865 IGHV7-81A0A0B4J1V7 117 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 LINC00158P58513 81 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 CARD19Q96LW7 228 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 EML5Q05BV3 1969 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 DNAJC13O75165 2243 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 PCDH15Q96QU1 1955 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 CEP192Q8TEP8 1941 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 C9orf153Q5TBE3 101 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 ANKRD29Q8N6D5 301 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 DEFB104AQ8WTQ1 72 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 TIMM17AQ99595 171 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 ZFP2Q6ZN57 461 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 NTN5Q8WTR8 489 aaPredicted RBP6.8□□□□□ -1.32
PCDH9-202ENST00000377865 LY6HO94772 140 aa6.8□□□□□ -1.32
PCDH9-202ENST00000377865 SUMO4Q6EEV6 95 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 PRIMA1Q86XR5 153 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 C15orf53Q8NAA6 179 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 RPL39LQ96EH5 51 aaKnown RBP6.79□□□□□ -1.32
PCDH9-202ENST00000377865 DNAJC30Q96LL9 226 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 BPESC1Q9GZL8 116 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 SPANXB1Q9NS25 103 aaPredicted RBP6.79□□□□□ -1.32
PCDH9-202ENST00000377865 BRD3OSQ6XYD6 125 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 B4DSR2 109 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 GAGE2AQ6NT46 116 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 EML6Q6ZMW3 1958 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 A0A1W2PNU3 283 aaPredicted RBP6.79□□□□□ -1.32
PCDH9-202ENST00000377865 IGLV2-11P01706 119 aa6.79□□□□□ -1.32
PCDH9-202ENST00000377865 GATA3P23771 443 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 HERVK_113P63121 156 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 RUSC1-AS1Q66K80 236 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 GNRH2O43555 120 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 FSTL3O95633 263 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 PIP4P2Q8N4L2 257 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 TRGV4A0A0C4DH28 118 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 A0A0U1RRA0 63 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 LINC01619G3V211 115 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 TTTY13Q9BZ97 58 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 KLK9Q9UKQ9 250 aa6.78□□□□□ -1.32
PCDH9-202ENST00000377865 PRAC2D3DTV9 90 aa6.77□□□□□ -1.32
PCDH9-202ENST00000377865 SPAG8Q99932 426 aaPredicted RBP6.77□□□□□ -1.33
PCDH9-202ENST00000377865 TRAV13-2A0A0B4J235 113 aa6.77□□□□□ -1.33
PCDH9-202ENST00000377865 SPINK13Q1W4C9 94 aa6.77□□□□□ -1.33
PCDH9-202ENST00000377865 EDA2RQ9HAV5 297 aa6.77□□□□□ -1.33
PCDH9-202ENST00000377865 TP73-AS1Q9UF72 201 aa6.77□□□□□ -1.33
PCDH9-202ENST00000377865 K7ENP7 123 aa6.77□□□□□ -1.33
PCDH9-202ENST00000377865 FANCD2OSQ96PS1 177 aa6.77□□□□□ -1.33
PCDH9-202ENST00000377865 DIDO1Q9BTC0 2240 aaKnown RBP6.77□□□□□ -1.33
PCDH9-202ENST00000377865 Q8N9W7 124 aa6.77□□□□□ -1.33
PCDH9-202ENST00000377865 ICOSQ9Y6W8 199 aa6.77□□□□□ -1.33
PCDH9-202ENST00000377865 ZNF407Q9C0G0 2248 aa6.76□□□□□ -1.33
PCDH9-202ENST00000377865 TRGV1A0A0A0MS02 117 aa6.76□□□□□ -1.33
PCDH9-202ENST00000377865 CENPVL3A0A0U1RRI6 287 aa6.76□□□□□ -1.33
PCDH9-202ENST00000377865 MALP21145 153 aa6.76□□□□□ -1.33
PCDH9-202ENST00000377865 ZNF80P51504 273 aaPredicted RBP6.76□□□□□ -1.33
PCDH9-202ENST00000377865 LINC01620Q4KN68 170 aa6.76□□□□□ -1.33
PCDH9-202ENST00000377865 PRR30Q53SZ7 412 aaPredicted RBP6.76□□□□□ -1.33
PCDH9-202ENST00000377865 NDUFA11Q86Y39 141 aa6.76□□□□□ -1.33
PCDH9-202ENST00000377865 MSRB2Q9Y3D2 182 aa6.76□□□□□ -1.33
PCDH9-202ENST00000377865 MUSTN1Q8IVN3 82 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms