RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TNFRSF6BO95407 300 aa11.24□□□□□ -0.61
TCOF1-202ENST00000377797 MTORP42345 2549 aa11.24□□□□□ -0.61
TCOF1-202ENST00000377797 ZNF48Q96MX3 618 aaPredicted RBP11.24□□□□□ -0.61
TCOF1-202ENST00000377797 DOPEY1Q5JWR5 2465 aa11.24□□□□□ -0.61
TCOF1-202ENST00000377797 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
TCOF1-202ENST00000377797 C1QTNF4Q9BXJ3 329 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 PCSK5Q92824 1860 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 DPM2O94777 84 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 IGF2BP2-AS1Q96M15 143 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 SLURP1P55000 103 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 TTC32Q5I0X7 151 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 C16orf54Q6UWD8 224 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 MRPL53Q96EL3 112 aaKnown RBP11.23□□□□□ -0.61
TCOF1-202ENST00000377797 TMEM158Q8WZ71 300 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 TMEM101Q96IK0 257 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 MCRIP2Q9BUT9 160 aaKnown RBP11.23□□□□□ -0.61
TCOF1-202ENST00000377797 CSTL1Q9H114 145 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 SPCS1Q9Y6A9 102 aa11.23□□□□□ -0.61
TCOF1-202ENST00000377797 A0A1B0GV72 72 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 TRBV12-3P01733 135 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 IGHV3-53P01767 116 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 IGLC2P0DOY2 106 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
TCOF1-202ENST00000377797 HIST2H2BCQ6DN03 193 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 IGHV1OR15-1A0A075B7D0 117 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 SYS1-DBNDD2H3BUS1 97 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 VCYO14598 125 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 UNQ9165/PRO28630Q6UXU0 137 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 WFDC11Q8NEX6 87 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 KLF12Q9Y4X4 402 aa11.22□□□□□ -0.61
TCOF1-202ENST00000377797 PRAC2D3DTV9 90 aa11.21□□□□□ -0.61
TCOF1-202ENST00000377797 CCDC140Q96MF4 163 aa11.21□□□□□ -0.61
TCOF1-202ENST00000377797 ATP6V0BQ99437 205 aa11.21□□□□□ -0.61
TCOF1-202ENST00000377797 RBAKDNA6NC62 111 aa11.21□□□□□ -0.62
TCOF1-202ENST00000377797 CCL24O00175 119 aa11.21□□□□□ -0.62
TCOF1-202ENST00000377797 MTURNQ8N3F0 131 aa11.21□□□□□ -0.62
TCOF1-202ENST00000377797 LENEPQ9Y5L5 61 aa11.21□□□□□ -0.62
TCOF1-202ENST00000377797 LRRC75A-AS1Q8N1F1 130 aa11.2□□□□□ -0.62
TCOF1-202ENST00000377797 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
TCOF1-202ENST00000377797 A0A1B0GWB2 263 aa11.2□□□□□ -0.62
TCOF1-202ENST00000377797 IGHV4-31P0DP07 118 aa11.2□□□□□ -0.62
TCOF1-202ENST00000377797 XIRP2A4UGR9 3374 aa11.2□□□□□ -0.62
TCOF1-202ENST00000377797 IGHV4OR15-8A0A075B7B6 117 aa11.2□□□□□ -0.62
TCOF1-202ENST00000377797 A0A087WW49 117 aa11.2□□□□□ -0.62
TCOF1-202ENST00000377797 H3BUT2 72 aa11.2□□□□□ -0.62
TCOF1-202ENST00000377797 FN1P02751 2386 aaKnown RBP11.2□□□□□ -0.62
TCOF1-202ENST00000377797 RIPPLY3P57055 190 aa11.19□□□□□ -0.62
TCOF1-202ENST00000377797 MRPL16Q9NX20 251 aaKnown RBP11.19□□□□□ -0.62
TCOF1-202ENST00000377797 IGKCP01834 107 aa11.19□□□□□ -0.62
TCOF1-202ENST00000377797 C3orf56Q8N813 242 aa11.19□□□□□ -0.62
TCOF1-202ENST00000377797 TSSC4Q9Y5U2 329 aaPredicted RBP11.19□□□□□ -0.62
TCOF1-202ENST00000377797 CHTOPQ9Y3Y2 248 aaKnown RBP11.19□□□□□ -0.62
TCOF1-202ENST00000377797 PTPRBP23467 1997 aa11.19□□□□□ -0.62
TCOF1-202ENST00000377797 CD28P10747 220 aa11.19□□□□□ -0.62
TCOF1-202ENST00000377797 hDV102S1A0JD36 115 aa11.18□□□□□ -0.62
TCOF1-202ENST00000377797 LINC01549A6NIU2 74 aa11.18□□□□□ -0.62
TCOF1-202ENST00000377797 IGF1P05019 195 aa11.18□□□□□ -0.62
TCOF1-202ENST00000377797 RPL36AP83881 106 aaKnown RBP11.18□□□□□ -0.62
TCOF1-202ENST00000377797 LINC01559Q495D7 138 aa11.18□□□□□ -0.62
TCOF1-202ENST00000377797 MEIG1Q5JSS6 88 aa11.18□□□□□ -0.62
TCOF1-202ENST00000377797 RPL36ALQ969Q0 106 aaKnown RBP11.18□□□□□ -0.62
TCOF1-202ENST00000377797 MRAP2Q96G30 205 aa11.18□□□□□ -0.62
TCOF1-202ENST00000377797 TRAV26-2A0A0B4J265 109 aa11.18□□□□□ -0.62
TCOF1-202ENST00000377797 CIRBPQ14011 172 aaKnown RBP11.18□□□□□ -0.62
TCOF1-202ENST00000377797 GPHB5Q86YW7 130 aa11.18□□□□□ -0.62
TCOF1-202ENST00000377797 ZNF664Q8N3J9 261 aa11.18□□□□□ -0.62
TCOF1-202ENST00000377797 GNRH2O43555 120 aa11.17□□□□□ -0.62
TCOF1-202ENST00000377797 K7EMT4 169 aa11.17□□□□□ -0.62
TCOF1-202ENST00000377797 NPYP01303 97 aa11.17□□□□□ -0.62
TCOF1-202ENST00000377797 SCGB1A1P11684 91 aa11.17□□□□□ -0.62
TCOF1-202ENST00000377797 DEFB1P60022 68 aa11.17□□□□□ -0.62
TCOF1-202ENST00000377797 FOXI2Q6ZQN5 318 aa11.17□□□□□ -0.62
TCOF1-202ENST00000377797 WIPF2Q8TF74 440 aaPredicted RBP11.17□□□□□ -0.62
TCOF1-202ENST00000377797 SPRY2O43597 315 aa11.16□□□□□ -0.62
TCOF1-202ENST00000377797 Q8N6K4 173 aa11.16□□□□□ -0.62
TCOF1-202ENST00000377797 OR9G4Q8NGQ1 327 aa11.16□□□□□ -0.62
TCOF1-202ENST00000377797 CD300EQ496F6 205 aaPredicted RBP11.16□□□□□ -0.62
TCOF1-202ENST00000377797 Q6ZWC4 215 aa11.16□□□□□ -0.62
TCOF1-202ENST00000377797 SZT2Q5T011 3432 aa11.16□□□□□ -0.62
TCOF1-202ENST00000377797 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
TCOF1-202ENST00000377797 IGKV3D-20A0A0C4DH25 116 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 EREGO14944 169 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 CHCHD5Q9BSY4 110 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 SIGLEC8Q9NYZ4 499 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 C2orf70A6NJV1 201 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 H3BRM9 83 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 IGHG4P01861 327 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 DEFB130BP0DP73 79 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 DEFB130AP0DP74 79 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 GTSF1Q8WW33 167 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 TOMM7Q9P0U1 55 aa11.15□□□□□ -0.62
TCOF1-202ENST00000377797 PHLDA1Q8WV24 401 aaPredicted RBP11.14□□□□□ -0.63
TCOF1-202ENST00000377797 FRMD6-AS1P0C7T7 363 aa11.14□□□□□ -0.63
TCOF1-202ENST00000377797 MSRB1Q9NZV6 116 aa11.14□□□□□ -0.63
TCOF1-202ENST00000377797 ZNF292O60281 2723 aa11.14□□□□□ -0.63
TCOF1-202ENST00000377797 ZC2HC1BQ5TFG8 222 aa11.13□□□□□ -0.63
TCOF1-202ENST00000377797 PRADC1Q9BSG0 188 aa11.13□□□□□ -0.63
TCOF1-202ENST00000377797 IGHV1-24A0A0C4DH33 117 aa11.13□□□□□ -0.63
TCOF1-202ENST00000377797 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
TCOF1-202ENST00000377797 TRPT1Q86TN4 253 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 276.4 ms