RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 HLA-DRB4P13762 266 aa9.52□□□□□ -0.88
SF1-204ENST00000377390 GAGE2BQ13066 116 aa9.52□□□□□ -0.88
SF1-204ENST00000377390 GAGE2EQ4V326 116 aa9.52□□□□□ -0.88
SF1-204ENST00000377390 GAGE2DQ9UEU5 116 aa9.52□□□□□ -0.88
SF1-204ENST00000377390 HLA-DRB4X5D2U9 266 aa9.52□□□□□ -0.88
SF1-204ENST00000377390 LINC00527Q9UJ94 153 aa9.52□□□□□ -0.89
SF1-204ENST00000377390 E9PLD3 99 aa9.52□□□□□ -0.89
SF1-204ENST00000377390 MGPP08493 103 aa9.52□□□□□ -0.89
SF1-204ENST00000377390 IGHV1-8P0DP01 117 aa9.52□□□□□ -0.89
SF1-204ENST00000377390 ODF1Q14990 250 aa9.52□□□□□ -0.89
SF1-204ENST00000377390 RRN3P1Q2M238 152 aa9.52□□□□□ -0.89
SF1-204ENST00000377390 DLX4Q92988 240 aaPredicted RBP9.52□□□□□ -0.89
SF1-204ENST00000377390 M0R381 172 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 CD3EP07766 207 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 RPL11P62913 178 aaKnown RBP9.51□□□□□ -0.89
SF1-204ENST00000377390 ZNF562Q6V9R5 426 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 Q6ZS92 163 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 CELSR2Q9HCU4 2923 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 KLRD1Q13241 179 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 RNF182Q8N6D2 247 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 ZNF491Q8N8L2 437 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 FAM57AQ8TBR7 257 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 NRGNQ92686 78 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 PRR25Q96S07 402 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 NXT2Q9NPJ8 142 aaKnown RBP9.51□□□□□ -0.89
SF1-204ENST00000377390 IGHV1-3A0A0C4DH29 117 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 FABP5P3A8MUU1 101 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 ZNF80P51504 273 aaPredicted RBP9.51□□□□□ -0.89
SF1-204ENST00000377390 RAX2Q96IS3 184 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 CHD6Q8TD26 2715 aa9.51□□□□□ -0.89
SF1-204ENST00000377390 LINC01548A6NM66 108 aa9.5□□□□□ -0.89
SF1-204ENST00000377390 ATP5LO75964 103 aa9.5□□□□□ -0.89
SF1-204ENST00000377390 SCGB3A1Q96QR1 104 aa9.5□□□□□ -0.89
SF1-204ENST00000377390 TIMM23O14925 209 aa9.5□□□□□ -0.89
SF1-204ENST00000377390 MFAP4P55083 255 aa9.5□□□□□ -0.89
SF1-204ENST00000377390 CITED1Q99966 193 aa9.5□□□□□ -0.89
SF1-204ENST00000377390 DTX2Q86UW9 622 aa9.5□□□□□ -0.89
SF1-204ENST00000377390 DPF1Q92782 380 aa9.5□□□□□ -0.89
SF1-204ENST00000377390 NFE4Q86UQ8 179 aa9.49□□□□□ -0.89
SF1-204ENST00000377390 CTSZQ9UBR2 303 aa9.49□□□□□ -0.89
SF1-204ENST00000377390 TRBV7-9A0A0J9YWB2 115 aa9.49□□□□□ -0.89
SF1-204ENST00000377390 ZNF815PA8K554 130 aa9.49□□□□□ -0.89
SF1-204ENST00000377390 IGHG3P01860 377 aa9.49□□□□□ -0.89
SF1-204ENST00000377390 CRYGCP07315 174 aa9.49□□□□□ -0.89
SF1-204ENST00000377390 ADIPOQQ15848 244 aa9.49□□□□□ -0.89
SF1-204ENST00000377390 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
SF1-204ENST00000377390 IGLV3-9A0A075B6K5 115 aa9.48□□□□□ -0.89
SF1-204ENST00000377390 A8MWV9 139 aa9.48□□□□□ -0.89
SF1-204ENST00000377390 TMEM178BH3BS89 294 aa9.48□□□□□ -0.89
SF1-204ENST00000377390 LOXP28300 417 aaPredicted RBP9.48□□□□□ -0.89
SF1-204ENST00000377390 GATA4P43694 442 aa9.48□□□□□ -0.89
SF1-204ENST00000377390 ERG28Q9UKR5 140 aa9.48□□□□□ -0.89
SF1-204ENST00000377390 ECSCRQ19T08 205 aa9.48□□□□□ -0.89
SF1-204ENST00000377390 Q8NA96 180 aa9.48□□□□□ -0.89
SF1-204ENST00000377390 C21orf62Q9NYP8 219 aa9.48□□□□□ -0.89
SF1-204ENST00000377390 TMEM14CQ9P0S9 112 aa9.48□□□□□ -0.89
SF1-204ENST00000377390 TRGV3P03979 118 aa9.47□□□□□ -0.89
SF1-204ENST00000377390 LAGE3Q14657 143 aa9.47□□□□□ -0.89
SF1-204ENST00000377390 H3BRN7 92 aa9.47□□□□□ -0.89
SF1-204ENST00000377390 HELZ2Q9BYK8 2649 aaKnown RBP9.47□□□□□ -0.89
SF1-204ENST00000377390 C9JAW5 83 aa9.47□□□□□ -0.89
SF1-204ENST00000377390 CCDC179H3BU77 68 aa9.47□□□□□ -0.89
SF1-204ENST00000377390 I3L2K1 104 aa9.47□□□□□ -0.89
SF1-204ENST00000377390 TMEM155Q4W5P6 130 aa9.47□□□□□ -0.89
SF1-204ENST00000377390 KLHL30-AS1Q8NEE0 82 aa9.47□□□□□ -0.89
SF1-204ENST00000377390 HHLA3Q9XRX5 114 aa9.47□□□□□ -0.89
SF1-204ENST00000377390 WI2-2373I1.2A0A1W2PRP0 233 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 GAGE12JA6NER3 117 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 E7EQL1 145 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 GAGE7O76087 117 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 IGHV4-39P01824 125 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 GAGE12FP0CL80 117 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 GAGE12GP0CL81 117 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 GAGE12IP0CL82 117 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 GAGE4Q13068 117 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 PVRIGQ6DKI7 326 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 IL17RELQ6ZVW7 336 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 CDIP1Q9H305 208 aa9.46□□□□□ -0.89
SF1-204ENST00000377390 F5H697 171 aa9.46□□□□□ -0.9
SF1-204ENST00000377390 K7EIM0 57 aa9.46□□□□□ -0.9
SF1-204ENST00000377390 TMEM78Q5T7P6 136 aa9.46□□□□□ -0.9
SF1-204ENST00000377390 TEP1Q99973 2627 aaKnown RBP9.46□□□□□ -0.9
SF1-204ENST00000377390 A6NJY4 79 aa9.46□□□□□ -0.9
SF1-204ENST00000377390 ZNF493Q6ZR52 646 aa9.46□□□□□ -0.9
SF1-204ENST00000377390 PPDPFLQ8WWR9 84 aa9.46□□□□□ -0.9
SF1-204ENST00000377390 TEX22C9J3V5 150 aa9.45□□□□□ -0.9
SF1-204ENST00000377390 PRAC2D3DTV9 90 aa9.45□□□□□ -0.9
SF1-204ENST00000377390 GNLYP22749 145 aa9.45□□□□□ -0.9
SF1-204ENST00000377390 BUB1B-PAK6H3BSN5 160 aa9.45□□□□□ -0.9
SF1-204ENST00000377390 SLC25A16P16260 332 aa9.45□□□□□ -0.9
SF1-204ENST00000377390 SRSF1Q07955 248 aaKnown RBP eCLIP9.45□□□□□ -0.94e-12■□□□□ 10.5
SF1-204ENST00000377390 TMEM170BQ5T4T1 132 aa9.45□□□□□ -0.9
SF1-204ENST00000377390 LYPD1Q8N2G4 141 aa9.45□□□□□ -0.9
SF1-204ENST00000377390 DYNAPQ8N1N2 210 aa9.44□□□□□ -0.9
SF1-204ENST00000377390 PHLDA1Q8WV24 401 aaPredicted RBP9.44□□□□□ -0.9
SF1-204ENST00000377390 DUX5Q96PT3 197 aa9.44□□□□□ -0.9
SF1-204ENST00000377390 NF1P21359 2839 aa9.44□□□□□ -0.9
SF1-204ENST00000377390 MBD3L4A6NDZ8 208 aaPredicted RBP9.44□□□□□ -0.9
SF1-204ENST00000377390 MBD3L3A6NE82 208 aaPredicted RBP9.44□□□□□ -0.9
SF1-204ENST00000377390 MBD3L5A6NJ08 208 aaPredicted RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms