RNA–Protein interactions for RNA: ENST00000377340.6

CRNKL1-202, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene CRNKL1, Length 4,406 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-202ENST00000377340 SRSF9Q13242 221 aaKnown RBP eCLIP6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 ZNF726P1Q15940 193 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 GAGE13Q4V321 117 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 C18orf65Q6ZTR6 163 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 ATP6V0BQ99437 205 aa6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 NOP10Q9NPE3 64 aaKnown RBP6.53□□□□□ -1.36
CRNKL1-202ENST00000377340 IGHV1OR15-1A0A075B7D0 117 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 F2Z2F3 143 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 CRPP02741 224 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 RNASE1P07998 156 aaKnown RBP6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 GPHB5Q86YW7 130 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 TSKUQ8WUA8 353 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 IZUMO1RA6ND01 250 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 VWC2LB2RUY7 222 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 AZU1P20160 251 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 OXLD1Q5BKU9 147 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 FAM19A2Q8N3H0 131 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 FXYD5Q96DB9 178 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 ZNF48Q96MX3 618 aaPredicted RBP6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 DMRT1Q9Y5R6 373 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 PCSK5Q92824 1860 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 NBEAL1Q6ZS30 2694 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 SRSF1Q07955 248 aaKnown RBP eCLIP6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 PATE2Q6UY27 113 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 OR10AG1Q8NH19 301 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 CCDC140Q96MF4 163 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 SCGB3A1Q96QR1 104 aa6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 MRPL16Q9NX20 251 aaKnown RBP6.52□□□□□ -1.37
CRNKL1-202ENST00000377340 PSCAO43653 123 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 PPP1R17O96001 155 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 IGF1P05019 195 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 CSTL1Q9H114 145 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 DMXL1Q9Y485 3027 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 PKIAP61925 76 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 SLAQ13239 276 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 TET2Q6N021 2002 aaPredicted RBP6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 SMKR1H3BMG3 65 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 PFN1P07737 140 aaKnown RBP6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 NDUFA11Q86Y39 141 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 LINC00482Q8N8I6 264 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 ZNF702PQ9H963 129 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 TMEM160Q9NX00 188 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 LSM4Q9Y4Z0 139 aaKnown RBP6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 LBHQ53QV2 105 aaPredicted RBP6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 FOXI2Q6ZQN5 318 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 PAM16Q9Y3D7 125 aa6.51□□□□□ -1.37
CRNKL1-202ENST00000377340 TACC2O95359 2948 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 GNRH2O43555 120 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 AMBPP02760 352 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 IQCJQ1A5X6 159 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 MEIG1Q5JSS6 88 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 PAPPA-AS1Q5QFB9 102 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 BOD1L2Q8IYS8 172 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 ATOH7Q8N100 152 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 OR11H2Q8NH07 326 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 PET117Q6UWS5 81 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 ZNF114Q8NC26 417 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 IGF2BP2-AS1Q96M15 143 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 CACNG7P62955 275 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 EBI3Q14213 229 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 CPAMD8Q8IZJ3 1885 aa6.5□□□□□ -1.37
CRNKL1-202ENST00000377340 IGHV3-38A0A0C4DH36 116 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 PRAC2D3DTV9 90 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 MALP21145 153 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 AMN1Q8IY45 258 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 VCX2Q9H322 139 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 TMEM213A2RRL7 107 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 CLUHP3Q96NS8 147 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 PMCHL2Q9BQD1 86 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 RPL24P83731 157 aaKnown RBP6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 TMEM97Q5BJF2 176 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 TMEM14CQ9P0S9 112 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 ADARB2-AS1A8MUL3 147 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 C9JQL5 133 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 D6R8Y8 96 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 SCGB1C2P0DMR2 95 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 IFI27P40305 119 aaPredicted RBP6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 DPH3P1Q9H4G8 78 aa6.49□□□□□ -1.37
CRNKL1-202ENST00000377340 A0A0U1RRA0 63 aa6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 TMEM89A2RUT3 159 aa6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 NUP35Q8NFH5 326 aa6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 TMEM70Q9BUB7 260 aa6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 CHTOPQ9Y3Y2 248 aaKnown RBP6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 ZNRF2Q8NHG8 242 aa6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 TMEM170AQ8WVE7 144 aa6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 HNRNPA3P51991 378 aaKnown RBP6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 C11orf68Q9H3H3 251 aaKnown RBP6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 CARHSP1Q9Y2V2 147 aaKnown RBP6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 U3KQE9 123 aa6.48□□□□□ -1.37
CRNKL1-202ENST00000377340 K7EMT4 169 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 INSL3P51460 131 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 FAM110AQ9BQ89 295 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 TRAV8-6A0A0B4J262 113 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 ZC2HC1AQ96GY0 325 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 C2orf88Q9BSF0 95 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 NOTCH1P46531 2555 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 TRBV9A0A0B4J1U6 114 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 TRAV13-1A0A0B4J241 112 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 IFITM10A6NMD0 228 aa6.47□□□□□ -1.37
CRNKL1-202ENST00000377340 PAX4O43316 350 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms