RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 CCL19Q99731 98 aa12.38□□□□□ -0.43
TRIM27-202ENST00000377199 SMIM17P0DL12 118 aa12.38□□□□□ -0.43
TRIM27-202ENST00000377199 RNASE4P34096 147 aaKnown RBP12.38□□□□□ -0.43
TRIM27-202ENST00000377199 ACACBO00763 2458 aa12.38□□□□□ -0.43
TRIM27-202ENST00000377199 PIEZO1Q92508 2521 aa12.38□□□□□ -0.43
TRIM27-202ENST00000377199 SORL1Q92673 2214 aa12.38□□□□□ -0.43
TRIM27-202ENST00000377199 MGPP08493 103 aa12.37□□□□□ -0.43
TRIM27-202ENST00000377199 ATP5J2P56134 94 aa12.37□□□□□ -0.43
TRIM27-202ENST00000377199 ODF1Q14990 250 aa12.37□□□□□ -0.43
TRIM27-202ENST00000377199 C14orf178Q8N769 122 aaPredicted RBP12.37□□□□□ -0.43
TRIM27-202ENST00000377199 PSMG3-AS1Q96PY0 264 aa12.37□□□□□ -0.43
TRIM27-202ENST00000377199 CBY1Q9Y3M2 126 aa12.37□□□□□ -0.43
TRIM27-202ENST00000377199 GCSHP23434 173 aa12.37□□□□□ -0.43
TRIM27-202ENST00000377199 ZC2HC1BQ5TFG8 222 aa12.37□□□□□ -0.43
TRIM27-202ENST00000377199 TMEM8BA6NDV4 472 aa12.36□□□□□ -0.43
TRIM27-202ENST00000377199 OR10J6PQ8NGY7 276 aa12.36□□□□□ -0.43
TRIM27-202ENST00000377199 PIMREGQ9BSJ6 248 aa12.36□□□□□ -0.43
TRIM27-202ENST00000377199 IGHV4-30-2A0A087WSY4 118 aa12.36□□□□□ -0.43
TRIM27-202ENST00000377199 C9orf47Q6ZRZ4 202 aa12.36□□□□□ -0.43
TRIM27-202ENST00000377199 PEF1Q9UBV8 284 aaKnown RBP12.36□□□□□ -0.43
TRIM27-202ENST00000377199 GPHB5Q86YW7 130 aa12.36□□□□□ -0.43
TRIM27-202ENST00000377199 OR4X2Q8NGF9 303 aa12.36□□□□□ -0.43
TRIM27-202ENST00000377199 OR1N2Q8NGR9 330 aa12.36□□□□□ -0.43
TRIM27-202ENST00000377199 IGKCP01834 107 aa12.35□□□□□ -0.43
TRIM27-202ENST00000377199 MRPL35Q9NZE8 188 aaKnown RBP12.35□□□□□ -0.43
TRIM27-202ENST00000377199 FAM223BA6NKX1 122 aa12.35□□□□□ -0.43
TRIM27-202ENST00000377199 GNRH2O43555 120 aa12.35□□□□□ -0.43
TRIM27-202ENST00000377199 PCP4P48539 62 aa12.35□□□□□ -0.43
TRIM27-202ENST00000377199 SRSF2Q01130 221 aaKnown RBP12.35□□□□□ -0.43
TRIM27-202ENST00000377199 FAM223AQ8IWN6 122 aa12.35□□□□□ -0.43
TRIM27-202ENST00000377199 Q8N8P6 123 aa12.35□□□□□ -0.43
TRIM27-202ENST00000377199 U3KQE9 123 aa12.35□□□□□ -0.43
TRIM27-202ENST00000377199 C9orf139Q6ZV77 190 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 MYOZ3Q8TDC0 251 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 RPL39LQ96EH5 51 aaKnown RBP12.34□□□□□ -0.43
TRIM27-202ENST00000377199 PHLDA3Q9Y5J5 127 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 GAGE10A6NGK3 116 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 IGKV3-20P01619 116 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 LAGE3Q14657 143 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 ANXA2RQ3ZCQ2 193 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 NRACQ8N912 160 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 MAPK1IP1LQ8NDC0 245 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 NPFFR1Q9GZQ6 430 aa12.34□□□□□ -0.43
TRIM27-202ENST00000377199 SFTPCP11686 197 aa12.33□□□□□ -0.43
TRIM27-202ENST00000377199 CLEC2AQ6UVW9 174 aa12.33□□□□□ -0.43
TRIM27-202ENST00000377199 NEGR1Q7Z3B1 354 aa12.33□□□□□ -0.43
TRIM27-202ENST00000377199 JMJD8Q96S16 334 aa12.33□□□□□ -0.43
TRIM27-202ENST00000377199 A6NDN8 102 aa12.33□□□□□ -0.44
TRIM27-202ENST00000377199 SEC11AP67812 179 aa12.33□□□□□ -0.44
TRIM27-202ENST00000377199 RHPN1-AS1Q9BWJ2 59 aa12.33□□□□□ -0.44
TRIM27-202ENST00000377199 HHLA3Q9XRX5 114 aa12.33□□□□□ -0.44
TRIM27-202ENST00000377199 IGSF10Q6WRI0 2623 aa12.33□□□□□ -0.44
TRIM27-202ENST00000377199 GAGE12BA1L429 117 aa12.33□□□□□ -0.44
TRIM27-202ENST00000377199 RBX1P62877 108 aa12.33□□□□□ -0.44
TRIM27-202ENST00000377199 K7ERJ3 54 aa12.32□□□□□ -0.44
TRIM27-202ENST00000377199 HSD52Q0P140 79 aa12.32□□□□□ -0.44
TRIM27-202ENST00000377199 ADAMTSL5Q6ZMM2 481 aa12.32□□□□□ -0.44
TRIM27-202ENST00000377199 ZFAND2AQ8N6M9 145 aa12.32□□□□□ -0.44
TRIM27-202ENST00000377199 IGLV2-18A0A075B6J9 118 aa12.32□□□□□ -0.44
TRIM27-202ENST00000377199 C10orf99Q6UWK7 81 aa12.32□□□□□ -0.44
TRIM27-202ENST00000377199 CST9LQ9H4G1 147 aa12.32□□□□□ -0.44
TRIM27-202ENST00000377199 DPM2O94777 84 aa12.31□□□□□ -0.44
TRIM27-202ENST00000377199 OR9G4Q8NGQ1 327 aa12.31□□□□□ -0.44
TRIM27-202ENST00000377199 AVPP01185 164 aa12.31□□□□□ -0.44
TRIM27-202ENST00000377199 A0A0G2JLM5 398 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 NDUFA4O00483 81 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 DPF1Q92782 380 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 SPOCK3Q9BQ16 436 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 TRAV21A0A0B4J279 112 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 ASIPP42127 132 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 FXYD2P54710 66 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 C10orf105Q8TEF2 133 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 MRPL53Q96EL3 112 aaKnown RBP12.3□□□□□ -0.44
TRIM27-202ENST00000377199 DOPEY1Q5JWR5 2465 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 C19orf54Q5BKX5 351 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 VPS25Q9BRG1 176 aa12.3□□□□□ -0.44
TRIM27-202ENST00000377199 SRSF1Q07955 248 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRIM27-202ENST00000377199 PRORYQ9H606 182 aa12.29□□□□□ -0.44
TRIM27-202ENST00000377199 LRRK2Q5S007 2527 aa12.29□□□□□ -0.44
TRIM27-202ENST00000377199 LINC00477Q96M19 166 aa12.29□□□□□ -0.44
TRIM27-202ENST00000377199 CHAC1Q9BUX1 264 aa12.29□□□□□ -0.44
TRIM27-202ENST00000377199 PPP1R14DQ9NXH3 145 aa12.29□□□□□ -0.44
TRIM27-202ENST00000377199 JPT2Q9H910 190 aa12.28□□□□□ -0.44
TRIM27-202ENST00000377199 TRBV25-1A0A075B6N4 114 aa12.28□□□□□ -0.44
TRIM27-202ENST00000377199 ATP5LO75964 103 aa12.28□□□□□ -0.44
TRIM27-202ENST00000377199 IGHG2P01859 326 aa12.28□□□□□ -0.44
TRIM27-202ENST00000377199 KLK9Q2XQG4 91 aa12.28□□□□□ -0.44
TRIM27-202ENST00000377199 SMIM2Q9BVW6 85 aa12.28□□□□□ -0.44
TRIM27-202ENST00000377199 KLK9Q9UKQ9 250 aa12.28□□□□□ -0.44
TRIM27-202ENST00000377199 C9orf118A6NHY6 69 aa12.27□□□□□ -0.44
TRIM27-202ENST00000377199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.27□□□□□ -0.44
TRIM27-202ENST00000377199 MSMBP08118 114 aa12.27□□□□□ -0.44
TRIM27-202ENST00000377199 MAPKAPK5-AS1Q8N8E1 139 aa12.27□□□□□ -0.44
TRIM27-202ENST00000377199 SCGB3A1Q96QR1 104 aa12.27□□□□□ -0.44
TRIM27-202ENST00000377199 NHP2Q9NX24 153 aaKnown RBP12.27□□□□□ -0.44
TRIM27-202ENST00000377199 SUMO2P61956 95 aaKnown RBP12.27□□□□□ -0.45
TRIM27-202ENST00000377199 OCIAD2Q56VL3 154 aa12.27□□□□□ -0.45
TRIM27-202ENST00000377199 RASL10AQ92737 203 aa12.27□□□□□ -0.45
TRIM27-202ENST00000377199 A0A087WWL8 130 aa12.27□□□□□ -0.45
TRIM27-202ENST00000377199 H3BRM9 83 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms