RNA–Protein interactions for RNA: ENST00000377078.2

USP11-202, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 5

Gene USP11, Length 1,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-202ENST00000377078 DNAH11Q96DT5 4516 aa11.85□□□□□ -0.51
USP11-202ENST00000377078 M0R2P5 195 aa11.84□□□□□ -0.51
USP11-202ENST00000377078 TAAR5O14804 337 aa11.84□□□□□ -0.51
USP11-202ENST00000377078 SUMO1P63165 101 aaKnown RBP11.84□□□□□ -0.51
USP11-202ENST00000377078 AKR1C8PQ5T2L2 129 aa11.84□□□□□ -0.51
USP11-202ENST00000377078 NEGR1Q7Z3B1 354 aa11.84□□□□□ -0.51
USP11-202ENST00000377078 CYB561D1Q8N8Q1 229 aa11.84□□□□□ -0.51
USP11-202ENST00000377078 EPDR1Q9UM22 224 aa11.84□□□□□ -0.51
USP11-202ENST00000377078 HERC2O95714 4834 aa11.84□□□□□ -0.51
USP11-202ENST00000377078 TRAV4A0A0B4J268 109 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 IGHV3-16A0A0C4DH30 117 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 CTXND1A0A1B0GTU2 59 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 A0A1W2PRE2 83 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 SIVA1O15304 175 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 ORM1P02763 201 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 SRIP30626 198 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 TNP2Q05952 138 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 OR4C5Q8NGB2 326 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 TVP23CQ96ET8 276 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 SGK494Q96LW2 274 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 PSG8Q9UQ74 426 aa11.83□□□□□ -0.52
USP11-202ENST00000377078 C9JCJ5 164 aa11.82□□□□□ -0.52
USP11-202ENST00000377078 GNRH2O43555 120 aa11.82□□□□□ -0.52
USP11-202ENST00000377078 TYMSP04818 313 aa11.82□□□□□ -0.52
USP11-202ENST00000377078 SFTA3P0C7M3 94 aa11.82□□□□□ -0.52
USP11-202ENST00000377078 PPT1P50897 306 aa11.82□□□□□ -0.52
USP11-202ENST00000377078 FLI1Q01543 452 aaPredicted RBP11.82□□□□□ -0.52
USP11-202ENST00000377078 SMUG1Q53HV7 270 aa11.82□□□□□ -0.52
USP11-202ENST00000377078 SAPCD1Q5SSQ6 148 aa11.82□□□□□ -0.52
USP11-202ENST00000377078 TMEM75Q8N9X5 138 aa11.82□□□□□ -0.52
USP11-202ENST00000377078 ZNF479Q96JC4 524 aa11.82□□□□□ -0.52
USP11-202ENST00000377078 GGTLC3B5MD39 225 aa11.81□□□□□ -0.52
USP11-202ENST00000377078 ARPC5O15511 151 aa11.81□□□□□ -0.52
USP11-202ENST00000377078 NXPH4O95158 308 aa11.81□□□□□ -0.52
USP11-202ENST00000377078 GCGP01275 180 aa11.81□□□□□ -0.52
USP11-202ENST00000377078 IFNA7P01567 189 aa11.81□□□□□ -0.52
USP11-202ENST00000377078 PRNTQ86SH4 94 aa11.81□□□□□ -0.52
USP11-202ENST00000377078 NKX6-2Q9C056 277 aaPredicted RBP11.81□□□□□ -0.52
USP11-202ENST00000377078 DYNC1H1Q14204 4646 aaKnown RBP11.8□□□□□ -0.52
USP11-202ENST00000377078 PFN1P07737 140 aaKnown RBP11.8□□□□□ -0.52
USP11-202ENST00000377078 TXNDC17Q9BRA2 123 aa11.8□□□□□ -0.52
USP11-202ENST00000377078 KRTAP1-5Q9BYS1 174 aa11.8□□□□□ -0.52
USP11-202ENST00000377078 TRAV9-2A0A087WT02 112 aa11.79□□□□□ -0.52
USP11-202ENST00000377078 C16orf90A8MZG2 172 aa11.79□□□□□ -0.52
USP11-202ENST00000377078 K7EQD1 137 aa11.79□□□□□ -0.52
USP11-202ENST00000377078 GYPEP15421 78 aa11.79□□□□□ -0.52
USP11-202ENST00000377078 LYPD5Q6UWN5 251 aa11.79□□□□□ -0.52
USP11-202ENST00000377078 SH2D6Q7Z4S9 175 aa11.79□□□□□ -0.52
USP11-202ENST00000377078 KIAA1109Q2LD37 5005 aa11.79□□□□□ -0.52
USP11-202ENST00000377078 CIDEAO60543 219 aa11.78□□□□□ -0.52
USP11-202ENST00000377078 ZNF876PQ49A33 203 aa11.78□□□□□ -0.52
USP11-202ENST00000377078 ZNF575Q86XF7 245 aa11.78□□□□□ -0.52
USP11-202ENST00000377078 IGLV2-11P01706 119 aa11.77□□□□□ -0.53
USP11-202ENST00000377078 UBE2G2P60604 165 aa11.77□□□□□ -0.53
USP11-202ENST00000377078 STOML3Q8TAV4 291 aa11.77□□□□□ -0.53
USP11-202ENST00000377078 HIST1H2BAQ96A08 127 aa11.77□□□□□ -0.53
USP11-202ENST00000377078 MAP1LC3B2A6NCE7 125 aa11.76□□□□□ -0.53
USP11-202ENST00000377078 PEX7O00628 323 aa11.76□□□□□ -0.53
USP11-202ENST00000377078 ZNF80P51504 273 aaPredicted RBP11.76□□□□□ -0.53
USP11-202ENST00000377078 LINC00315P59091 139 aa11.76□□□□□ -0.53
USP11-202ENST00000377078 ZNF726P1Q15940 193 aa11.76□□□□□ -0.53
USP11-202ENST00000377078 MAP1LC3BQ9GZQ8 125 aa11.76□□□□□ -0.53
USP11-202ENST00000377078 LY96Q9Y6Y9 160 aa11.76□□□□□ -0.53
USP11-202ENST00000377078 G3V3Q6 166 aa11.75□□□□□ -0.53
USP11-202ENST00000377078 K7EP13 123 aa11.75□□□□□ -0.53
USP11-202ENST00000377078 FGF8P55075 233 aaPredicted RBP11.75□□□□□ -0.53
USP11-202ENST00000377078 NFE4Q86UQ8 179 aa11.75□□□□□ -0.53
USP11-202ENST00000377078 NHLRC2Q8NBF2 726 aa11.75□□□□□ -0.53
USP11-202ENST00000377078 ARL2-SNX15V9GYD0 113 aa11.75□□□□□ -0.53
USP11-202ENST00000377078 TRAV34A0A0B4J273 112 aa11.74□□□□□ -0.53
USP11-202ENST00000377078 FAM74A7A6NL05 159 aa11.74□□□□□ -0.53
USP11-202ENST00000377078 GATA1P15976 413 aaPredicted RBP11.74□□□□□ -0.53
USP11-202ENST00000377078 EVI2AP22794 236 aa11.74□□□□□ -0.53
USP11-202ENST00000377078 S100A4P26447 101 aaKnown RBP11.74□□□□□ -0.53
USP11-202ENST00000377078 ZNF345Q14585 488 aa11.74□□□□□ -0.53
USP11-202ENST00000377078 TCEAL7Q9BRU2 100 aa11.74□□□□□ -0.53
USP11-202ENST00000377078 PRADC1Q9BSG0 188 aa11.74□□□□□ -0.53
USP11-202ENST00000377078 FABP5P3A8MUU1 101 aa11.73□□□□□ -0.53
USP11-202ENST00000377078 EREGO14944 169 aa11.73□□□□□ -0.53
USP11-202ENST00000377078 SPATA12Q7Z6I5 190 aa11.73□□□□□ -0.53
USP11-202ENST00000377078 LINC00479Q96M42 142 aa11.73□□□□□ -0.53
USP11-202ENST00000377078 C9orf85Q96MD7 179 aa11.73□□□□□ -0.53
USP11-202ENST00000377078 CYTL1Q9NRR1 136 aa11.73□□□□□ -0.53
USP11-202ENST00000377078 C11orf21Q9P2W6 132 aa11.73□□□□□ -0.53
USP11-202ENST00000377078 BOLA1Q9Y3E2 137 aa11.73□□□□□ -0.53
USP11-202ENST00000377078 UBE2G1P62253 170 aa11.72□□□□□ -0.53
USP11-202ENST00000377078 RHOHQ15669 191 aa11.72□□□□□ -0.53
USP11-202ENST00000377078 CFAP126Q5VTH2 177 aa11.72□□□□□ -0.53
USP11-202ENST00000377078 Q86TA4 180 aa11.72□□□□□ -0.53
USP11-202ENST00000377078 KCNRGQ8N5I3 272 aa11.72□□□□□ -0.53
USP11-202ENST00000377078 PTH2Q96A98 100 aa11.72□□□□□ -0.53
USP11-202ENST00000377078 ZFP30Q9Y2G7 519 aa11.72□□□□□ -0.53
USP11-202ENST00000377078 HMSDA8MTL9 139 aa11.71□□□□□ -0.53
USP11-202ENST00000377078 UMAD1C9J7I0 102 aa11.71□□□□□ -0.53
USP11-202ENST00000377078 SMLR1H3BR10 107 aa11.71□□□□□ -0.53
USP11-202ENST00000377078 RS1O15537 224 aa11.71□□□□□ -0.53
USP11-202ENST00000377078 ASIPP42127 132 aa11.71□□□□□ -0.53
USP11-202ENST00000377078 FHITP49789 147 aa11.71□□□□□ -0.53
USP11-202ENST00000377078 CST9LP1Q5W188 147 aa11.71□□□□□ -0.53
USP11-202ENST00000377078 C10orf126Q8N4M7 172 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms