RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SCRT2Q9NQ03 307 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 SPTAN1Q13813 2472 aaKnown RBP10.65□□□□□ -0.7
GPC6-201ENST00000377047 TRAV25A0A0B4J276 109 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 A8MWP6 167 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 SIGLEC8Q9NYZ4 499 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 NDUFA12Q9UI09 145 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 C9JAW5 83 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 H3BMM0 161 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 RNF138Q8WVD3 245 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 UBE2WQ96B02 151 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 ANAPC13Q9BS18 74 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 SPRY2O43597 315 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 OCIAD2Q56VL3 154 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 WIPF2Q8TF74 440 aaPredicted RBP10.65□□□□□ -0.7
GPC6-201ENST00000377047 EDA2RQ9HAV5 297 aa10.65□□□□□ -0.7
GPC6-201ENST00000377047 PRR20EP86478 221 aa10.65□□□□□ -0.71
GPC6-201ENST00000377047 PRR20CP86479 221 aa10.65□□□□□ -0.71
GPC6-201ENST00000377047 PRR20DP86480 221 aa10.65□□□□□ -0.71
GPC6-201ENST00000377047 PRR20BP86481 221 aa10.65□□□□□ -0.71
GPC6-201ENST00000377047 PRR20AP86496 221 aa10.65□□□□□ -0.71
GPC6-201ENST00000377047 C16orf74Q96GX8 76 aa10.65□□□□□ -0.71
GPC6-201ENST00000377047 WIPF3A6NGB9 483 aa10.65□□□□□ -0.71
GPC6-201ENST00000377047 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.71
GPC6-201ENST00000377047 KRTAP27-1Q3LI81 207 aa10.65□□□□□ -0.71
GPC6-201ENST00000377047 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.64□□□□□ -0.71
GPC6-201ENST00000377047 IGKV2-29A2NJV5 120 aaPredicted RBP10.64□□□□□ -0.71
GPC6-201ENST00000377047 LTAP01374 205 aa10.64□□□□□ -0.71
GPC6-201ENST00000377047 PRORYQ9H606 182 aa10.64□□□□□ -0.71
GPC6-201ENST00000377047 Q8NA96 180 aa10.64□□□□□ -0.71
GPC6-201ENST00000377047 Q8N9W7 124 aa10.64□□□□□ -0.71
GPC6-201ENST00000377047 SPRY4Q9C004 299 aa10.64□□□□□ -0.71
GPC6-201ENST00000377047 PCNX2A6NKB5 2137 aa10.64□□□□□ -0.71
GPC6-201ENST00000377047 Q8NFD4 153 aa10.64□□□□□ -0.71
GPC6-201ENST00000377047 SIGMAR1Q99720 223 aa10.64□□□□□ -0.71
GPC6-201ENST00000377047 ICOSQ9Y6W8 199 aa10.64□□□□□ -0.71
GPC6-201ENST00000377047 ZFHX2Q9C0A1 2572 aaPredicted RBP10.63□□□□□ -0.71
GPC6-201ENST00000377047 ABCA1O95477 2261 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 GYPEP15421 78 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 CCL18P55774 89 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 TEX48A0A1B0GUV7 120 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 RBAKDNA6NC62 111 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 TAL2Q16559 108 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 SUMO4Q6EEV6 95 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 C1orf43Q9BWL3 253 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 EGR2P11161 476 aaPredicted RBP10.63□□□□□ -0.71
GPC6-201ENST00000377047 I3L2K1 104 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 ESM1Q9NQ30 184 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 C2orf16Q68DN1 1984 aa10.63□□□□□ -0.71
GPC6-201ENST00000377047 CACNA1HO95180 2353 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 IGLV11-55A0A075B6I3 123 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 C20orf78Q9BR46 151 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 WISP2O76076 250 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 NCKAP5O14513 1909 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 F8W735 103 aaPredicted RBP10.62□□□□□ -0.71
GPC6-201ENST00000377047 IGHV3-30P01768 117 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 IGHV3-33P01772 117 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 ATP5G1P05496 136 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 IGHV3-30-3P0DP02 117 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 IGHV3-30-5P0DP03 117 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 ADAMTSL5Q6ZMM2 481 aa10.62□□□□□ -0.71
GPC6-201ENST00000377047 K7EIM0 57 aa10.61□□□□□ -0.71
GPC6-201ENST00000377047 RPL18AQ02543 176 aaKnown RBP10.61□□□□□ -0.71
GPC6-201ENST00000377047 KMT2EQ8IZD2 1858 aa10.61□□□□□ -0.71
GPC6-201ENST00000377047 MRPL35Q9NZE8 188 aaKnown RBP10.61□□□□□ -0.71
GPC6-201ENST00000377047 RBMY1FQ15415 496 aaKnown RBP10.61□□□□□ -0.71
GPC6-201ENST00000377047 CLPSL1A2RUU4 121 aa10.61□□□□□ -0.71
GPC6-201ENST00000377047 GAGE2BQ13066 116 aa10.61□□□□□ -0.71
GPC6-201ENST00000377047 MRPL23Q16540 153 aaKnown RBP10.61□□□□□ -0.71
GPC6-201ENST00000377047 Q8N7P7 452 aa10.6□□□□□ -0.71
GPC6-201ENST00000377047 C2orf70A6NJV1 201 aa10.6□□□□□ -0.71
GPC6-201ENST00000377047 PYY3Q5JQD4 70 aa10.6□□□□□ -0.71
GPC6-201ENST00000377047 CITED2Q99967 270 aaPredicted RBP10.6□□□□□ -0.71
GPC6-201ENST00000377047 MYCNOSP40205 109 aa10.6□□□□□ -0.71
GPC6-201ENST00000377047 SOCS3O14543 225 aa10.6□□□□□ -0.71
GPC6-201ENST00000377047 C16orf54Q6UWD8 224 aa10.6□□□□□ -0.71
GPC6-201ENST00000377047 C4orf3Q8WVX3 66 aa10.6□□□□□ -0.71
GPC6-201ENST00000377047 K7EQD1 137 aa10.59□□□□□ -0.71
GPC6-201ENST00000377047 CTSGP08311 255 aa10.59□□□□□ -0.71
GPC6-201ENST00000377047 C11orf52Q96A22 123 aa10.59□□□□□ -0.71
GPC6-201ENST00000377047 CRLF1O75462 422 aa10.59□□□□□ -0.71
GPC6-201ENST00000377047 LENEPQ9Y5L5 61 aa10.59□□□□□ -0.71
GPC6-201ENST00000377047 RNF152Q8N8N0 203 aa10.59□□□□□ -0.71
GPC6-201ENST00000377047 MALRD1Q5VYJ5 2156 aa10.59□□□□□ -0.71
GPC6-201ENST00000377047 ATP6V0E2Q8NHE4 81 aa10.59□□□□□ -0.71
GPC6-201ENST00000377047 K7EN84 100 aa10.58□□□□□ -0.72
GPC6-201ENST00000377047 BUB3O43684 328 aa10.58□□□□□ -0.72
GPC6-201ENST00000377047 MUC6Q6W4X9 2439 aa10.58□□□□□ -0.72
GPC6-201ENST00000377047 IGLV10-54A0A075B6I4 117 aa10.58□□□□□ -0.72
GPC6-201ENST00000377047 DNAJC9-AS1A6NH13 148 aa10.58□□□□□ -0.72
GPC6-201ENST00000377047 ZFAND6Q6FIF0 208 aa10.58□□□□□ -0.72
GPC6-201ENST00000377047 DEFB4AO15263 64 aa10.58□□□□□ -0.72
GPC6-201ENST00000377047 DEFB135Q30KP9 77 aa10.58□□□□□ -0.72
GPC6-201ENST00000377047 ZNF664Q8N3J9 261 aa10.58□□□□□ -0.72
GPC6-201ENST00000377047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.58□□□□□ -0.726e-8■■■□□ 17.3
GPC6-201ENST00000377047 F8VRH5 84 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 C19orf84I3L1E1 186 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 FBXL19-AS1Q494R0 122 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 MORN5Q5VZ52 161 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 C5orf38Q86SI9 138 aa10.57□□□□□ -0.72
GPC6-201ENST00000377047 PLXNB3Q9ULL4 1909 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms