RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 IGHV3OR16-10A0A075B7F0 116 aa10.07□□□□□ -0.8
ACTN1-202ENST00000376839 PRSS47A8MTI9 375 aa10.07□□□□□ -0.8
ACTN1-202ENST00000376839 NPFFO15130 113 aa10.07□□□□□ -0.8
ACTN1-202ENST00000376839 LMO4P61968 165 aa10.07□□□□□ -0.8
ACTN1-202ENST00000376839 ATP5G2Q06055 141 aa10.07□□□□□ -0.8
ACTN1-202ENST00000376839 PSMG4Q5JS54 123 aa10.07□□□□□ -0.8
ACTN1-202ENST00000376839 NEGR1Q7Z3B1 354 aa10.07□□□□□ -0.8
ACTN1-202ENST00000376839 PHLDA1Q8WV24 401 aaPredicted RBP10.07□□□□□ -0.8
ACTN1-202ENST00000376839 HIF1ANQ9NWT6 349 aa10.07□□□□□ -0.8
ACTN1-202ENST00000376839 NHP2Q9NX24 153 aaKnown RBP10.07□□□□□ -0.8
ACTN1-202ENST00000376839 TRBV12-3P01733 135 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 OR5A1Q8NGJ0 315 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 GLMPQ8WWB7 406 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 CSTL1Q9H114 145 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 A0A087WX48 190 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 UNQ9165/PRO28630Q6UXU0 137 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 CEND1Q8N111 149 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 ITLN2Q8WWU7 325 aaPredicted RBP10.06□□□□□ -0.8
ACTN1-202ENST00000376839 G3V4G9 280 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 GPHB5Q86YW7 130 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 SMIM2Q9BVW6 85 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 KLK15Q9H2R5 256 aa10.06□□□□□ -0.8
ACTN1-202ENST00000376839 M0R381 172 aa10.05□□□□□ -0.8
ACTN1-202ENST00000376839 SRSF1Q07955 248 aaKnown RBP eCLIP10.05□□□□□ -0.8
ACTN1-202ENST00000376839 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
ACTN1-202ENST00000376839 AGRNO00468 2067 aa10.05□□□□□ -0.8
ACTN1-202ENST00000376839 TRAV41A0A0B4J266 112 aa10.05□□□□□ -0.8
ACTN1-202ENST00000376839 ZFAND2AQ8N6M9 145 aa10.05□□□□□ -0.8
ACTN1-202ENST00000376839 ABCA2Q9BZC7 2435 aa10.04□□□□□ -0.8
ACTN1-202ENST00000376839 C9orf139Q6ZV77 190 aa10.04□□□□□ -0.8
ACTN1-202ENST00000376839 HLA-DRB4P13762 266 aa10.04□□□□□ -0.8
ACTN1-202ENST00000376839 C19orf54Q5BKX5 351 aa10.04□□□□□ -0.8
ACTN1-202ENST00000376839 RASL10AQ92737 203 aa10.04□□□□□ -0.8
ACTN1-202ENST00000376839 RPL39LQ96EH5 51 aaKnown RBP10.04□□□□□ -0.8
ACTN1-202ENST00000376839 MRAP2Q96G30 205 aa10.04□□□□□ -0.8
ACTN1-202ENST00000376839 HLA-DRB4X5D2U9 266 aa10.04□□□□□ -0.8
ACTN1-202ENST00000376839 SPTAN1Q13813 2472 aaKnown RBP10.04□□□□□ -0.8
ACTN1-202ENST00000376839 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.03□□□□□ -0.8
ACTN1-202ENST00000376839 ARL3P36405 182 aa10.03□□□□□ -0.8
ACTN1-202ENST00000376839 COL12A1Q99715 3063 aa10.03□□□□□ -0.8
ACTN1-202ENST00000376839 C14orf178Q8N769 122 aaPredicted RBP10.02□□□□□ -0.8
ACTN1-202ENST00000376839 MOB4Q9Y3A3 225 aa10.02□□□□□ -0.8
ACTN1-202ENST00000376839 F6UB75 175 aa10.02□□□□□ -0.81
ACTN1-202ENST00000376839 PLNP26678 52 aa10.02□□□□□ -0.81
ACTN1-202ENST00000376839 SUMO2P61956 95 aaKnown RBP10.02□□□□□ -0.81
ACTN1-202ENST00000376839 BRD3OSQ6XYD6 125 aa10.02□□□□□ -0.81
ACTN1-202ENST00000376839 FAM223BA6NKX1 122 aa10.02□□□□□ -0.81
ACTN1-202ENST00000376839 F8VRH5 84 aa10.02□□□□□ -0.81
ACTN1-202ENST00000376839 SOCS3O14543 225 aa10.02□□□□□ -0.81
ACTN1-202ENST00000376839 FAM223AQ8IWN6 122 aa10.02□□□□□ -0.81
ACTN1-202ENST00000376839 LENEPQ9Y5L5 61 aa10.02□□□□□ -0.81
ACTN1-202ENST00000376839 RNF223E7ERA6 249 aa10.01□□□□□ -0.81
ACTN1-202ENST00000376839 H7C1H1 209 aa10.01□□□□□ -0.81
ACTN1-202ENST00000376839 S100A4P26447 101 aaKnown RBP10.01□□□□□ -0.81
ACTN1-202ENST00000376839 ANXA2RQ3ZCQ2 193 aa10.01□□□□□ -0.81
ACTN1-202ENST00000376839 SCGB3A1Q96QR1 104 aa10.01□□□□□ -0.81
ACTN1-202ENST00000376839 IGKV3-7A0A075B6H7 116 aa10.01□□□□□ -0.81
ACTN1-202ENST00000376839 OR10J6PQ8NGY7 276 aa10.01□□□□□ -0.81
ACTN1-202ENST00000376839 LINC00477Q96M19 166 aa10.01□□□□□ -0.81
ACTN1-202ENST00000376839 TRAV12-1A0A0B4J245 112 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 TRAV21A0A0B4J279 112 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 IGLL5B9A064 214 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 E9PLD3 99 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 IGHV3-11P01762 117 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 MGPP08493 103 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 TOMM6Q96B49 74 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 CHTOPQ9Y3Y2 248 aaKnown RBP10□□□□□ -0.81
ACTN1-202ENST00000376839 TEX48A0A1B0GUV7 120 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 GNRH2O43555 120 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 RNASE4P34096 147 aaKnown RBP10□□□□□ -0.81
ACTN1-202ENST00000376839 RPL24P83731 157 aaKnown RBP10□□□□□ -0.81
ACTN1-202ENST00000376839 C12orf74Q32Q52 190 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 HIST1H4GQ99525 98 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 DPH3P1Q9H4G8 78 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 PHLDA3Q9Y5J5 127 aa10□□□□□ -0.81
ACTN1-202ENST00000376839 MAP1AP78559 2803 aaPredicted RBP10□□□□□ -0.81
ACTN1-202ENST00000376839 ASIPP42127 132 aa9.99□□□□□ -0.81
ACTN1-202ENST00000376839 RPL11P62913 178 aaKnown RBP9.99□□□□□ -0.81
ACTN1-202ENST00000376839 ORMDL2Q53FV1 153 aa9.99□□□□□ -0.81
ACTN1-202ENST00000376839 NEXN-AS1Q8NBZ9 246 aa9.99□□□□□ -0.81
ACTN1-202ENST00000376839 NCOR2Q9Y618 2525 aa9.99□□□□□ -0.81
ACTN1-202ENST00000376839 UCNP55089 124 aa9.99□□□□□ -0.81
ACTN1-202ENST00000376839 CHD8Q9HCK8 2581 aa9.99□□□□□ -0.81
ACTN1-202ENST00000376839 TRBV7-3A0A075B6L6 115 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 CRIP2P52943 208 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-202ENST00000376839 LY6EQ16553 131 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 LCNL1Q6ZST4 164 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 ATP6V0BQ99437 205 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 OR11H12B2RN74 326 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 C19orf84I3L1E1 186 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 NDUFA4O00483 81 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 OVOL1O14753 267 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 RNASE3P12724 160 aaKnown RBP9.98□□□□□ -0.81
ACTN1-202ENST00000376839 TAL2Q16559 108 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 C2orf66Q6UXQ4 117 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 OR11H1Q8NG94 326 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 OR11H2Q8NH07 326 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 BAALCQ8WXS3 180 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 ZNF479Q96JC4 524 aa9.98□□□□□ -0.81
ACTN1-202ENST00000376839 C20orf78Q9BR46 151 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms