RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	IGHV3-38	A0A0C4DH36	116 aa		10.28	□□□□□ -0.76
DDR1-225	ENST00000376568		A0A0J9YY99	117 aa		10.28	□□□□□ -0.76
DDR1-225	ENST00000376568	MRGPRG-AS1	Q2M3A8	158 aa		10.28	□□□□□ -0.76
DDR1-225	ENST00000376568	MSRB1	Q9NZV6	116 aa		10.28	□□□□□ -0.76
DDR1-225	ENST00000376568	FRMD6-AS1	P0C7T7	363 aa		10.27	□□□□□ -0.76
DDR1-225	ENST00000376568	CDKN1B	P46527	198 aa		10.27	□□□□□ -0.77
DDR1-225	ENST00000376568	C16orf54	Q6UWD8	224 aa		10.27	□□□□□ -0.77
DDR1-225	ENST00000376568	NUP35	Q8NFH5	326 aa		10.27	□□□□□ -0.77
DDR1-225	ENST00000376568		H3BUA1	57 aa		10.27	□□□□□ -0.77
DDR1-225	ENST00000376568	WDR73	Q6P4I2	378 aa		10.27	□□□□□ -0.77
DDR1-225	ENST00000376568	C4orf3	Q8WVX3	66 aa		10.27	□□□□□ -0.77
DDR1-225	ENST00000376568	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	10.27	□□□□□ -0.77
DDR1-225	ENST00000376568	HSBP1L1	C9JCN9	74 aa		10.26	□□□□□ -0.77
DDR1-225	ENST00000376568	OR10AG1	Q8NH19	301 aa		10.26	□□□□□ -0.77
DDR1-225	ENST00000376568	NOP10	Q9NPE3	64 aa	Known RBP	10.26	□□□□□ -0.77
DDR1-225	ENST00000376568		K7EN84	100 aa		10.26	□□□□□ -0.77
DDR1-225	ENST00000376568	GPHB5	Q86YW7	130 aa		10.26	□□□□□ -0.77
DDR1-225	ENST00000376568	WI2-2373I1.2	A0A1W2PRP0	233 aa		10.26	□□□□□ -0.77
DDR1-225	ENST00000376568		F5H768	121 aa		10.26	□□□□□ -0.77
DDR1-225	ENST00000376568	AMMECR1L	Q6DCA0	310 aa		10.26	□□□□□ -0.77
DDR1-225	ENST00000376568	ZNF705A	Q6ZN79	300 aa	Predicted RBP	10.26	□□□□□ -0.77
DDR1-225	ENST00000376568	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.26	□□□□□ -0.77
DDR1-225	ENST00000376568	NUDT3	O95989	172 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	INS	P01308	110 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	KRTAP1-3	Q8IUG1	177 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	OR4C5	Q8NGB2	326 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	KCNS1	Q96KK3	526 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	C20orf173	Q96LM9	149 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	PRELID3A	Q96N28	172 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	C1orf194	Q5T5A4	169 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	PRO1933	Q9H354	126 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	TNFRSF18	Q9Y5U5	241 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	TRBV9	A0A0B4J1U6	114 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	LEP	P41159	167 aa		10.25	□□□□□ -0.77
DDR1-225	ENST00000376568	TCAP	O15273	167 aa		10.24	□□□□□ -0.77
DDR1-225	ENST00000376568	ELOB	Q15370	118 aa		10.24	□□□□□ -0.77
DDR1-225	ENST00000376568	TMEM18	Q96B42	140 aa		10.24	□□□□□ -0.77
DDR1-225	ENST00000376568	PDE6H	Q13956	83 aa		10.24	□□□□□ -0.77
DDR1-225	ENST00000376568	TMEM86B	Q8N661	226 aa		10.24	□□□□□ -0.77
DDR1-225	ENST00000376568	ZFAND3	Q9H8U3	227 aa		10.24	□□□□□ -0.77
DDR1-225	ENST00000376568	JPT2	Q9H910	190 aa		10.23	□□□□□ -0.77
DDR1-225	ENST00000376568	DEFB114	Q30KQ6	69 aa		10.23	□□□□□ -0.77
DDR1-225	ENST00000376568	SMAD5-AS1	Q9Y6J3	95 aa		10.23	□□□□□ -0.77
DDR1-225	ENST00000376568	TSKU	Q8WUA8	353 aa		10.23	□□□□□ -0.77
DDR1-225	ENST00000376568	OSTC	Q9NRP0	149 aa		10.23	□□□□□ -0.77
DDR1-225	ENST00000376568		D6R8Y8	96 aa		10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	GATA1	P15976	413 aa	Predicted RBP	10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	OTOG	Q6ZRI0	2925 aa		10.22	□□□□□ -0.77
DDR1-225	ENST00000376568		F8W735	103 aa	Predicted RBP	10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	PFN1	P07737	140 aa	Known RBP	10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	KRTAP24-1	Q3LI83	254 aa		10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	C7orf71	A4D174	169 aa		10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	HLA-DQA1	P01909	254 aa		10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	MYCNOS	P40205	109 aa		10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	C9orf66	Q5T8R8	295 aa		10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	LINC00322	Q6ZN03	302 aa	Predicted RBP	10.22	□□□□□ -0.77
DDR1-225	ENST00000376568	TP53TG3	Q9ULZ0	132 aa		10.22	□□□□□ -0.77
DDR1-225	ENST00000376568		A0A096LNT2	108 aa		10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	GAGE12J	A6NER3	117 aa		10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	IGLV1-40	P01703	118 aa		10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	IGLC2	P0DOY2	106 aa		10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	RPS20	P60866	119 aa	Known RBP	10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	GAGE1	Q13065	139 aa		10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	GAGE4	Q13068	117 aa		10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	GAGE5	Q13069	117 aa		10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	GAGE13	Q4V321	117 aa		10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	SPAG8	Q99932	426 aa	Predicted RBP	10.21	□□□□□ -0.77
DDR1-225	ENST00000376568	ZNF80	P51504	273 aa	Predicted RBP	10.21	□□□□□ -0.78
DDR1-225	ENST00000376568	LYPD1	Q8N2G4	141 aa		10.21	□□□□□ -0.78
DDR1-225	ENST00000376568	CXorf65	A6NEN9	183 aa		10.21	□□□□□ -0.78
DDR1-225	ENST00000376568		Q6ZN92	141 aa		10.2	□□□□□ -0.78
DDR1-225	ENST00000376568	AP1S3	Q96PC3	154 aa		10.2	□□□□□ -0.78
DDR1-225	ENST00000376568	TMEM14C	Q9P0S9	112 aa		10.2	□□□□□ -0.78
DDR1-225	ENST00000376568	IGHV1OR15-1	A0A075B7D0	117 aa		10.2	□□□□□ -0.78
DDR1-225	ENST00000376568	SNAI2	O43623	268 aa		10.2	□□□□□ -0.78
DDR1-225	ENST00000376568	MAP6D1	Q9H9H5	199 aa		10.2	□□□□□ -0.78
DDR1-225	ENST00000376568	MDFIC	Q9P1T7	246 aa		10.2	□□□□□ -0.78
DDR1-225	ENST00000376568	UBE2L6	O14933	153 aa		10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	MAP1LC3A	Q9H492	121 aa		10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	PAM16	Q9Y3D7	125 aa		10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	C20orf202	A1L168	122 aa		10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	INS-IGF2	F8WCM5	200 aa		10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	EIF4E3	Q8N5X7	224 aa	Known RBP	10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	CHCHD5	Q9BSY4	110 aa		10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	TMEM256	Q8N2U0	113 aa		10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	TCEAL7	Q9BRU2	100 aa		10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	ZNF492	Q9P255	531 aa		10.19	□□□□□ -0.78
DDR1-225	ENST00000376568	OR11H2	Q8NH07	326 aa		10.18	□□□□□ -0.78
DDR1-225	ENST00000376568	SERF1A	O75920	110 aa		10.18	□□□□□ -0.78
DDR1-225	ENST00000376568	OR10J3	Q5JRS4	329 aa		10.18	□□□□□ -0.78
DDR1-225	ENST00000376568	PACRG	Q96M98	296 aa	Predicted RBP	10.18	□□□□□ -0.78
DDR1-225	ENST00000376568	AP5S1	Q9NUS5	200 aa		10.18	□□□□□ -0.78
DDR1-225	ENST00000376568	AZU1	P20160	251 aa		10.17	□□□□□ -0.78
DDR1-225	ENST00000376568	DAD1	P61803	113 aa		10.17	□□□□□ -0.78
DDR1-225	ENST00000376568		Q8N1Y9	231 aa		10.17	□□□□□ -0.78
DDR1-225	ENST00000376568	KIR2DL4	Q99706	377 aa		10.17	□□□□□ -0.78
DDR1-225	ENST00000376568		U3KQE9	123 aa		10.17	□□□□□ -0.78
DDR1-225	ENST00000376568	IGHV3-64	A0A075B6Q5	118 aa		10.17	□□□□□ -0.78
DDR1-225	ENST00000376568	PRSS47	A8MTI9	375 aa		10.17	□□□□□ -0.78

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