RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 RIGQ13278 110 aa9.39□□□□□ -0.91
CLCN6-206ENST00000376496 COX19Q49B96 90 aa9.39□□□□□ -0.91
CLCN6-206ENST00000376496 FAM19A4Q96LR4 140 aa9.39□□□□□ -0.91
CLCN6-206ENST00000376496 PACRGQ96M98 296 aaPredicted RBP9.39□□□□□ -0.91
CLCN6-206ENST00000376496 A0A0J9YX75 114 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 ADARB2-AS1A8MUL3 147 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 FHL3Q13643 280 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 DEFB114Q30KQ6 69 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 ALKBH7Q9BT30 221 aaPredicted RBP9.38□□□□□ -0.91
CLCN6-206ENST00000376496 TRAV12-3A0A0B4J271 114 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 H3BVH4 76 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 GNRH2O43555 120 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 APRG1Q8IVJ8 170 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 AMN1Q8IY45 258 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 OR10AG1Q8NH19 301 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 C18orf32Q8TCD1 76 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 JMJD8Q96S16 334 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 NOTCH3Q9UM47 2321 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 PAFAH1B2P68402 229 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 ANXA2RQ3ZCQ2 193 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 PPP1R14DQ9NXH3 145 aa9.38□□□□□ -0.91
CLCN6-206ENST00000376496 ATRQ13535 2644 aa9.37□□□□□ -0.91
CLCN6-206ENST00000376496 NDUFA7O95182 113 aa9.37□□□□□ -0.91
CLCN6-206ENST00000376496 LOC102724200A0A096LPH7 203 aaPredicted RBP9.37□□□□□ -0.91
CLCN6-206ENST00000376496 CTRLP40313 264 aa9.37□□□□□ -0.91
CLCN6-206ENST00000376496 RPS20P60866 119 aaKnown RBP9.37□□□□□ -0.91
CLCN6-206ENST00000376496 PYY3Q5JQD4 70 aa9.37□□□□□ -0.91
CLCN6-206ENST00000376496 EBLN2Q6P2I7 272 aa9.37□□□□□ -0.91
CLCN6-206ENST00000376496 VWFP04275 2813 aa9.37□□□□□ -0.91
CLCN6-206ENST00000376496 PCP4L1A6NKN8 68 aa9.36□□□□□ -0.91
CLCN6-206ENST00000376496 SMKR1H3BMG3 65 aa9.36□□□□□ -0.91
CLCN6-206ENST00000376496 FAM19A2Q8N3H0 131 aa9.36□□□□□ -0.91
CLCN6-206ENST00000376496 Q0VG73 95 aa9.36□□□□□ -0.91
CLCN6-206ENST00000376496 Q6AWC8 147 aa9.36□□□□□ -0.91
CLCN6-206ENST00000376496 LENEPQ9Y5L5 61 aa9.36□□□□□ -0.91
CLCN6-206ENST00000376496 TRAV21A0A0B4J279 112 aa9.35□□□□□ -0.91
CLCN6-206ENST00000376496 CRLF1O75462 422 aa9.35□□□□□ -0.91
CLCN6-206ENST00000376496 GAS8-AS1O95177 125 aa9.35□□□□□ -0.91
CLCN6-206ENST00000376496 S100A8P05109 93 aa9.35□□□□□ -0.91
CLCN6-206ENST00000376496 PMCHP20382 165 aa9.35□□□□□ -0.91
CLCN6-206ENST00000376496 NCR2O95944 276 aa9.35□□□□□ -0.91
CLCN6-206ENST00000376496 PMCHL1Q16048 86 aa9.35□□□□□ -0.91
CLCN6-206ENST00000376496 KLLNB2CW77 178 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 SAP30O75446 220 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 PRM2P04554 102 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 SAMD13Q5VXD3 122 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 RNASEKQ6P5S7 137 aaKnown RBP9.34□□□□□ -0.91
CLCN6-206ENST00000376496 SPATA3Q8NHX4 192 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 MAP6D1Q9H9H5 199 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 RBMY1BA6NDE4 496 aaKnown RBP9.34□□□□□ -0.91
CLCN6-206ENST00000376496 RBMY1EA6NEQ0 496 aaKnown RBP9.34□□□□□ -0.91
CLCN6-206ENST00000376496 RBMY1DP0C7P1 496 aaKnown RBP9.34□□□□□ -0.91
CLCN6-206ENST00000376496 FOSL1P15407 271 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 EVI2AP22794 236 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 OR10J3Q5JRS4 329 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 URB1-AS1Q96HZ7 61 aa9.34□□□□□ -0.91
CLCN6-206ENST00000376496 D6R8Y8 96 aa9.33□□□□□ -0.92
CLCN6-206ENST00000376496 M0R381 172 aa9.33□□□□□ -0.92
CLCN6-206ENST00000376496 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.33□□□□□ -0.92
CLCN6-206ENST00000376496 TMEM18Q96B42 140 aa9.33□□□□□ -0.92
CLCN6-206ENST00000376496 SAMD10Q9BYL1 202 aa9.33□□□□□ -0.92
CLCN6-206ENST00000376496 NIT2Q9NQR4 276 aa9.33□□□□□ -0.92
CLCN6-206ENST00000376496 ZNF256Q9Y2P7 627 aaPredicted RBP9.33□□□□□ -0.92
CLCN6-206ENST00000376496 S100A4P26447 101 aaKnown RBP9.33□□□□□ -0.92
CLCN6-206ENST00000376496 MRPL51Q4U2R6 128 aaKnown RBP9.33□□□□□ -0.92
CLCN6-206ENST00000376496 AMTNQ6UX39 209 aa9.33□□□□□ -0.92
CLCN6-206ENST00000376496 FOXI2Q6ZQN5 318 aa9.33□□□□□ -0.92
CLCN6-206ENST00000376496 HTN1P15515 57 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 FAM104BQ5XKR9 115 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 MUC4Q99102 2169 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 C7orf71A4D174 169 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 RBMY1A1P0DJD3 496 aaKnown RBP9.32□□□□□ -0.92
CLCN6-206ENST00000376496 RBMY1CP0DJD4 496 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 GATA1P15976 413 aaPredicted RBP9.32□□□□□ -0.92
CLCN6-206ENST00000376496 RBMY1FQ15415 496 aaKnown RBP9.32□□□□□ -0.92
CLCN6-206ENST00000376496 SPANXN1Q5VSR9 72 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 NIT1Q86X76 327 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 LOC389332A0A1B0GUA5 103 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 AMTP48728 403 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 ODF3L2Q3SX64 289 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 ZNF493Q6ZR52 646 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 KCNS1Q96KK3 526 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 WFDC10AQ9H1F0 79 aa9.32□□□□□ -0.92
CLCN6-206ENST00000376496 H3BMM0 161 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 ZNF324O75467 553 aaPredicted RBP9.31□□□□□ -0.92
CLCN6-206ENST00000376496 Q6ZWC4 215 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 TRAV26-2A0A0B4J265 109 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 CD7P09564 240 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 RNASE3P12724 160 aaKnown RBP9.31□□□□□ -0.92
CLCN6-206ENST00000376496 ASIPP42127 132 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 CDKN1BP46527 198 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 FAM159AQ6UWV7 190 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 GATD1Q8NB37 220 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 RNF185Q96GF1 192 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 CNFNQ9BYD5 112 aa9.31□□□□□ -0.92
CLCN6-206ENST00000376496 A0A1B0GW15 77 aa9.3□□□□□ -0.92
CLCN6-206ENST00000376496 LEPP41159 167 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms