RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 FBXL15Q9H469 300 aa9.5□□□□□ -0.89
C9orf3-203ENST00000375315 MRPL36Q9P0J6 103 aaKnown RBP9.5□□□□□ -0.89
C9orf3-203ENST00000375315 IFITM1P13164 125 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 COX7A1P24310 79 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 DIAPH2-AS1Q14236 149 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 C17orf58Q2M2W7 97 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 HIGD1AQ9Y241 93 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 AGRNO00468 2067 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 TMSB15BA0A087X1C1 80 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 IGHV3-72A0A0B4J1Y9 119 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 MYMXA0A1B0GTQ4 84 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 WT1-ASQ06250 92 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 TMEM200BQ69YZ2 307 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 RAB1BQ9H0U4 201 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 YAE1D1Q9NRH1 226 aa9.49□□□□□ -0.89
C9orf3-203ENST00000375315 MRPL35Q9NZE8 188 aaKnown RBP9.49□□□□□ -0.89
C9orf3-203ENST00000375315 TRBV20-1A0A075B6N2 111 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 CENPVL3A0A0U1RRI6 287 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 LINC01546A6NGU7 62 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 LINC01549A6NIU2 74 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 ASIPP42127 132 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 CGB3P0DN86 165 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 CGB7P0DN87 165 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 CRIP1P50238 77 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 KIR2DL4Q99706 377 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 TMEM14CQ9P0S9 112 aa9.48□□□□□ -0.89
C9orf3-203ENST00000375315 ONECUT1Q9UBC0 465 aa9.47□□□□□ -0.89
C9orf3-203ENST00000375315 PLNP26678 52 aa9.47□□□□□ -0.89
C9orf3-203ENST00000375315 LOXP28300 417 aaPredicted RBP9.47□□□□□ -0.89
C9orf3-203ENST00000375315 ZNF843Q8N446 348 aa9.47□□□□□ -0.89
C9orf3-203ENST00000375315 MYOZ3Q8TDC0 251 aa9.47□□□□□ -0.89
C9orf3-203ENST00000375315 A0A087WX48 190 aa9.47□□□□□ -0.89
C9orf3-203ENST00000375315 E7EUB6 86 aa9.47□□□□□ -0.89
C9orf3-203ENST00000375315 H3BVH4 76 aa9.47□□□□□ -0.89
C9orf3-203ENST00000375315 ASCL2Q99929 193 aa9.47□□□□□ -0.89
C9orf3-203ENST00000375315 ZFP2Q6ZN57 461 aa9.46□□□□□ -0.89
C9orf3-203ENST00000375315 ANKRD17O75179 2603 aaKnown RBP9.46□□□□□ -0.9
C9orf3-203ENST00000375315 UBE2D3P61077 147 aa9.46□□□□□ -0.9
C9orf3-203ENST00000375315 UBE2D2P62837 147 aa9.46□□□□□ -0.9
C9orf3-203ENST00000375315 SFTA2Q6UW10 78 aa9.46□□□□□ -0.9
C9orf3-203ENST00000375315 PPP1R27Q86WC6 154 aa9.46□□□□□ -0.9
C9orf3-203ENST00000375315 SBSPONQ8IVN8 264 aa9.46□□□□□ -0.9
C9orf3-203ENST00000375315 ANKRD29Q8N6D5 301 aa9.46□□□□□ -0.9
C9orf3-203ENST00000375315 J3KRW8 73 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 LYZP61626 148 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 TEX36Q5VZQ5 186 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 Q6Q795 121 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 TMEM167AQ8TBQ9 72 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 HECTD1Q9ULT8 2610 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 SONP18583 2426 aaKnown RBP9.45□□□□□ -0.9
C9orf3-203ENST00000375315 ENSAO43768 121 aaKnown RBP9.45□□□□□ -0.9
C9orf3-203ENST00000375315 PRTN3P24158 256 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 C10orf55Q5SWW7 151 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 HIST2H2BCQ6DN03 193 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 TRAV8-2A0A0B4J237 113 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 NDUFA3O95167 84 aa9.45□□□□□ -0.9
C9orf3-203ENST00000375315 TNFRSF6BO95407 300 aa9.44□□□□□ -0.9
C9orf3-203ENST00000375315 APELAP0DMC3 54 aa9.44□□□□□ -0.9
C9orf3-203ENST00000375315 SCGB1C2P0DMR2 95 aa9.44□□□□□ -0.9
C9orf3-203ENST00000375315 ZANQ9Y493 2812 aa9.44□□□□□ -0.9
C9orf3-203ENST00000375315 SH2D1AO60880 128 aa9.44□□□□□ -0.9
C9orf3-203ENST00000375315 SCGB2A1O75556 95 aa9.44□□□□□ -0.9
C9orf3-203ENST00000375315 FAM159AQ6UWV7 190 aa9.44□□□□□ -0.9
C9orf3-203ENST00000375315 C8orf49Q96NF6 230 aa9.44□□□□□ -0.9
C9orf3-203ENST00000375315 RASL11BQ9BPW5 248 aa9.44□□□□□ -0.9
C9orf3-203ENST00000375315 TRAV4A0A0B4J268 109 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 CGB1A6NKQ9 187 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 PLGLAQ15195 96 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 LYPD1Q8N2G4 141 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 AJUBAQ96IF1 538 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 TRBV19A0A075B6N1 114 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 LINC01548A6NM66 108 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 TCL1BO95988 128 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 UBE2D1P51668 147 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 SRSF9Q13242 221 aaKnown RBP eCLIP9.43□□□□□ -0.9
C9orf3-203ENST00000375315 TMEM30BQ3MIR4 351 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 Q8N8P6 123 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 TIMD4Q96H15 378 aa9.43□□□□□ -0.9
C9orf3-203ENST00000375315 MRPL20Q9BYC9 149 aaKnown RBP9.43□□□□□ -0.9
C9orf3-203ENST00000375315 DSCAML1Q8TD84 2053 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 MEIG1Q5JSS6 88 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 TMEM78Q5T7P6 136 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 HCP5Q6MZN7 132 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 OR11H6Q8NGC7 330 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 VPREB3Q9UKI3 123 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 LGALS1P09382 135 aaKnown RBP9.42□□□□□ -0.9
C9orf3-203ENST00000375315 ID1P41134 155 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 OR4C13Q8NGP0 309 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 RNF185Q96GF1 192 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 BPESC1Q9GZL8 116 aa9.42□□□□□ -0.9
C9orf3-203ENST00000375315 RPUSD1Q9UJJ7 312 aaKnown RBP9.42□□□□□ -0.9
C9orf3-203ENST00000375315 IGHV3OR16-10A0A075B7F0 116 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 H7C1H1 209 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 SCGB1D4Q6XE38 83 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 SIGLEC15Q6ZMC9 328 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 MAPK1IP1LQ8NDC0 245 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 TMEM126AQ9H061 195 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 AAMDCQ9H7C9 122 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 A0A1W2PPI3 338 aa9.41□□□□□ -0.9
C9orf3-203ENST00000375315 RUSC1-AS1Q66K80 236 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms