RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 PRR30Q53SZ7 412 aaPredicted RBP8.06□□□□□ -1.12
CD28-202ENST00000374481 CLEC19AQ6UXS0 136 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 Q6ZQT7 251 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 PINLYPA6NC86 204 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 NBR2O15453 112 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 TRIP6Q15654 476 aaKnown RBP8.06□□□□□ -1.12
CD28-202ENST00000374481 NFE4Q86UQ8 179 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 C1orf162Q8NEQ5 155 aaPredicted RBP8.06□□□□□ -1.12
CD28-202ENST00000374481 PCNX2A6NKB5 2137 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 IGKV3OR2-268A0A0C4DH90 116 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 HRCT1Q6UXD1 115 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 NRGNQ92686 78 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 KNCNA6PVL3 124 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 H3BRN7 92 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 LGALS9O00182 355 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 CRYGBP07316 175 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 BRWD1-AS2P59051 145 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 KHDC1LQ5JSQ8 128 aa8.06□□□□□ -1.12
CD28-202ENST00000374481 ZNF503-AS2A6NEH8 195 aa8.05□□□□□ -1.12
CD28-202ENST00000374481 C5orf67F2Z3F1 127 aa8.05□□□□□ -1.12
CD28-202ENST00000374481 DPM3Q9P2X0 92 aa8.05□□□□□ -1.12
CD28-202ENST00000374481 A0A087WWL8 130 aa8.05□□□□□ -1.12
CD28-202ENST00000374481 UBE2L6O14933 153 aa8.05□□□□□ -1.12
CD28-202ENST00000374481 MRPS12O15235 138 aaKnown RBP8.05□□□□□ -1.12
CD28-202ENST00000374481 Q8N7P7 452 aa8.05□□□□□ -1.12
CD28-202ENST00000374481 LOC107984640A0A0U1RRK4 108 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 SDHAF1A6NFY7 115 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 M0R1W7 72 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 LEPROTO15243 131 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 SIGLEC15Q6ZMC9 328 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 CLEC2BQ92478 149 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 TANC2Q9HCD6 1990 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 C17orf58Q2M2W7 97 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 MKI67P46013 3256 aaKnown RBP8.04□□□□□ -1.12
CD28-202ENST00000374481 TTC28Q96AY4 2481 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 TRAV25A0A0B4J276 109 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 COL8A2P25067 703 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 PRIMA1Q86XR5 153 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 UBL5Q9BZL1 73 aa8.04□□□□□ -1.12
CD28-202ENST00000374481 A0A0U1RQV1 116 aa8.03□□□□□ -1.12
CD28-202ENST00000374481 IMUPQ9GZP8 106 aa8.03□□□□□ -1.12
CD28-202ENST00000374481 ARRDC1-AS1Q9H2J1 176 aa8.03□□□□□ -1.12
CD28-202ENST00000374481 TRBV7-3A0A075B6L6 115 aa8.03□□□□□ -1.12
CD28-202ENST00000374481 TINCRA0A1B0GVN0 87 aa8.03□□□□□ -1.12
CD28-202ENST00000374481 RBAKDNA6NC62 111 aa8.03□□□□□ -1.12
CD28-202ENST00000374481 C11orf86A6NJI1 115 aa8.03□□□□□ -1.12
CD28-202ENST00000374481 Q71RC1 249 aaPredicted RBP8.03□□□□□ -1.12
CD28-202ENST00000374481 BAALCQ8WXS3 180 aa8.03□□□□□ -1.12
CD28-202ENST00000374481 RIF1Q5UIP0 2472 aaKnown RBP8.03□□□□□ -1.12
CD28-202ENST00000374481 TMEM200BQ69YZ2 307 aa8.02□□□□□ -1.12
CD28-202ENST00000374481 TPSG1Q9NRR2 321 aa8.02□□□□□ -1.12
CD28-202ENST00000374481 OVOL1O14753 267 aa8.02□□□□□ -1.13
CD28-202ENST00000374481 COX7CP15954 63 aa8.02□□□□□ -1.13
CD28-202ENST00000374481 C8orf31Q8N9H6 132 aa8.02□□□□□ -1.13
CD28-202ENST00000374481 LINC00158P58513 81 aa8.02□□□□□ -1.13
CD28-202ENST00000374481 DEFB109BQ30KR1 87 aa8.02□□□□□ -1.13
CD28-202ENST00000374481 KRTAP27-1Q3LI81 207 aa8.02□□□□□ -1.13
CD28-202ENST00000374481 ADAMTS9Q9P2N4 1935 aa8.02□□□□□ -1.13
CD28-202ENST00000374481 IGHV1-69DA0A0B4J2H0 117 aa8.02□□□□□ -1.13
CD28-202ENST00000374481 C16orf97H3BN30 126 aa8.02□□□□□ -1.13
CD28-202ENST00000374481 RHOHQ15669 191 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 GAFA1Q96PS6 74 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 MED13LQ71F56 2210 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 THADAQ6YHU6 1953 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 IGHV1-18A0A0C4DH31 117 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 PAX4O43316 350 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 NDPQ00604 133 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 ZNF491Q8N8L2 437 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 LINC00477Q96M19 166 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 IGHV1-3A0A0C4DH29 117 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 TRGV3P03979 118 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 ZNF833PQ6ZTB9 187 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 C17orf82Q86X59 251 aaPredicted RBP8.01□□□□□ -1.13
CD28-202ENST00000374481 CFHR4Q92496 578 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 RASL10AQ92737 203 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 AGRNO00468 2067 aa8.01□□□□□ -1.13
CD28-202ENST00000374481 MRPL36Q9P0J6 103 aaKnown RBP8.01□□□□□ -1.13
CD28-202ENST00000374481 EYSQ5T1H1 3165 aa8□□□□□ -1.13
CD28-202ENST00000374481 C10orf105Q8TEF2 133 aa8□□□□□ -1.13
CD28-202ENST00000374481 HHLA3Q9XRX5 114 aa8□□□□□ -1.13
CD28-202ENST00000374481 A0A0J9YY99 117 aa8□□□□□ -1.13
CD28-202ENST00000374481 CRLF1O75462 422 aa8□□□□□ -1.13
CD28-202ENST00000374481 HAMPP81172 84 aa8□□□□□ -1.13
CD28-202ENST00000374481 DIAPH2-AS1Q14236 149 aa8□□□□□ -1.13
CD28-202ENST00000374481 GFRALQ6UXV0 394 aa8□□□□□ -1.13
CD28-202ENST00000374481 RPL39LQ96EH5 51 aaKnown RBP8□□□□□ -1.13
CD28-202ENST00000374481 CEP350Q5VT06 3117 aa8□□□□□ -1.13
CD28-202ENST00000374481 IGHV1-46P01743 117 aa8□□□□□ -1.13
CD28-202ENST00000374481 TOMM6Q96B49 74 aa8□□□□□ -1.13
CD28-202ENST00000374481 TRBV6-1A0A0K0K1D8 114 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 PROP1O75360 226 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 IGHV3-33P01772 117 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 IGHG2P01859 326 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 IGHV1-8P0DP01 117 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 NBL1P41271 181 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 C9orf139Q6ZV77 190 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 SLC25A29Q8N8R3 303 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 UBE2E1P51965 193 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 AJUBAQ96IF1 538 aa7.99□□□□□ -1.13
CD28-202ENST00000374481 C17orf100A8MU93 164 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms