RNA–Protein interactions for RNA: ENST00000374379.8

CLIC4-201, Transcript of chloride intracellular channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC4, Length 4,346 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-201ENST00000374379 OR2K2Q8NGT1 345 aa10.49□□□□□ -0.73
CLIC4-201ENST00000374379 PAX1P15863 534 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 TEX43Q6ZNM6 134 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 AJUBAQ96IF1 538 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 CCDC140Q96MF4 163 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 C2orf88Q9BSF0 95 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 KALRNO60229 2985 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 GNRH2O43555 120 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 SRSF1Q07955 248 aaKnown RBP eCLIP10.48□□□□□ -0.73
CLIC4-201ENST00000374379 C21orf62-AS1Q17RA5 79 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 ST20Q9HBF5 79 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 IGKV3OR2-268A0A0C4DH90 116 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 NDUFA4O00483 81 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 DEFB131AP59861 70 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 HIST2H2BDQ6DRA6 164 aa10.48□□□□□ -0.73
CLIC4-201ENST00000374379 C19orf71A6NCJ1 209 aa10.47□□□□□ -0.73
CLIC4-201ENST00000374379 MLST8Q9BVC4 326 aa10.47□□□□□ -0.73
CLIC4-201ENST00000374379 ZC2HC1BQ5TFG8 222 aa10.47□□□□□ -0.73
CLIC4-201ENST00000374379 LAGE3Q14657 143 aa10.47□□□□□ -0.73
CLIC4-201ENST00000374379 IGHV3-64A0A075B6Q5 118 aa10.46□□□□□ -0.73
CLIC4-201ENST00000374379 PRSS2P07478 247 aa10.46□□□□□ -0.73
CLIC4-201ENST00000374379 TP73-AS1Q9UF72 201 aa10.46□□□□□ -0.73
CLIC4-201ENST00000374379 RNF114Q9Y508 228 aa10.46□□□□□ -0.74
CLIC4-201ENST00000374379 CD300EQ496F6 205 aaPredicted RBP10.46□□□□□ -0.74
CLIC4-201ENST00000374379 UBE2E2Q96LR5 201 aa10.46□□□□□ -0.74
CLIC4-201ENST00000374379 H3BUT2 72 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 DPM2O94777 84 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 LOC107984156A0A0G2JMH3 177 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 VWC2LB2RUY7 222 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 ARL17AQ8IVW1 177 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 CSTL1Q9H114 145 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 IGKCP01834 107 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 NSUN5P1Q3KNT7 163 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 GTF2H5Q6ZYL4 71 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 MBD6Q96DN6 1003 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 DPH3P1Q9H4G8 78 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 DCHS1Q96JQ0 3298 aa10.45□□□□□ -0.74
CLIC4-201ENST00000374379 IGHV7-4-1A0A0J9YVY3 117 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 CRIP1P50238 77 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 IGKV3D-20A0A0C4DH25 116 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 TCTEX1D4Q5JR98 221 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 C10orf99Q6UWK7 81 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 Q6ZS46 218 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 MS4A6AQ9H2W1 248 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 NHP2Q9NX24 153 aaKnown RBP10.44□□□□□ -0.74
CLIC4-201ENST00000374379 TNFRSF18Q9Y5U5 241 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 MYCNOSP40205 109 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 LOXL1Q08397 574 aaPredicted RBP10.44□□□□□ -0.74
CLIC4-201ENST00000374379 HIST2H2BCQ6DN03 193 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 DKK2Q9UBU2 259 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 TACC2O95359 2948 aa10.44□□□□□ -0.74
CLIC4-201ENST00000374379 TMEM8BA6NDV4 472 aa10.43□□□□□ -0.74
CLIC4-201ENST00000374379 IGF1P05019 195 aa10.43□□□□□ -0.74
CLIC4-201ENST00000374379 KIR2DL5BA0A0G2JN68 375 aa10.43□□□□□ -0.74
CLIC4-201ENST00000374379 KIR2DL5BA0A0G2JPC4 375 aa10.43□□□□□ -0.74
CLIC4-201ENST00000374379 KIR2DL5AQ8N109 375 aa10.43□□□□□ -0.74
CLIC4-201ENST00000374379 PEMTQ9UBM1 199 aa10.43□□□□□ -0.74
CLIC4-201ENST00000374379 GATA3P23771 443 aa10.43□□□□□ -0.74
CLIC4-201ENST00000374379 PSMB2P49721 201 aa10.43□□□□□ -0.74
CLIC4-201ENST00000374379 KLF5Q13887 457 aaPredicted RBP10.43□□□□□ -0.74
CLIC4-201ENST00000374379 MRGPRG-AS1Q2M3A8 158 aa10.43□□□□□ -0.74
CLIC4-201ENST00000374379 ZNF876PQ49A33 203 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 SMPXQ9UHP9 88 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 LAMA5O15230 3695 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 ZNF747Q9BV97 191 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 CYSLTR1Q9Y271 337 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 IGHV3-53P01767 116 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 RIPPLY3P57055 190 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 A0A1B0GXF2 115 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 APOMO95445 188 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 PF4P02776 101 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 RRN3P1Q2M238 152 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 STHQ8IWL8 128 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 SMAD5-AS1Q9Y6J3 95 aa10.42□□□□□ -0.74
CLIC4-201ENST00000374379 DLEU1O43261 78 aa10.41□□□□□ -0.74
CLIC4-201ENST00000374379 DUSP14O95147 198 aaKnown RBP10.41□□□□□ -0.74
CLIC4-201ENST00000374379 FABP2P12104 132 aa10.41□□□□□ -0.74
CLIC4-201ENST00000374379 AMMECR1LQ6DCA0 310 aa10.41□□□□□ -0.74
CLIC4-201ENST00000374379 CHTOPQ9Y3Y2 248 aaKnown RBP10.41□□□□□ -0.74
CLIC4-201ENST00000374379 IGLV2-11P01706 119 aa10.41□□□□□ -0.74
CLIC4-201ENST00000374379 ORMDL2Q53FV1 153 aa10.41□□□□□ -0.74
CLIC4-201ENST00000374379 NPIPB6E9PJ23 425 aa10.41□□□□□ -0.74
CLIC4-201ENST00000374379 XCL2Q9UBD3 114 aa10.41□□□□□ -0.74
CLIC4-201ENST00000374379 LINC00310P59036 64 aa10.4□□□□□ -0.74
CLIC4-201ENST00000374379 NPSP0C0P6 89 aa10.4□□□□□ -0.74
CLIC4-201ENST00000374379 HOXD3P31249 432 aaPredicted RBP10.4□□□□□ -0.74
CLIC4-201ENST00000374379 SPOCK3Q9BQ16 436 aa10.4□□□□□ -0.74
CLIC4-201ENST00000374379 LRBAP50851 2863 aa10.4□□□□□ -0.74
CLIC4-201ENST00000374379 LGALS3P17931 250 aaKnown RBP10.4□□□□□ -0.74
CLIC4-201ENST00000374379 SLURP1P55000 103 aa10.4□□□□□ -0.74
CLIC4-201ENST00000374379 SUMO2P61956 95 aaKnown RBP10.4□□□□□ -0.74
CLIC4-201ENST00000374379 KIR3DS1Q14943 382 aa10.4□□□□□ -0.74
CLIC4-201ENST00000374379 TMEM190Q8WZ59 177 aa10.4□□□□□ -0.74
CLIC4-201ENST00000374379 SAP30O75446 220 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 C16orf54Q6UWD8 224 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 TTTY13Q9BZ97 58 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 FSTL3O95633 263 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 PPP1R17O96001 155 aa10.39□□□□□ -0.75
CLIC4-201ENST00000374379 IGHG2P01859 326 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms