RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 KIR3DS1Q14943 382 aa14.16□□□□□ -0.14
USP49-202ENST00000373010 UFC1Q9Y3C8 167 aa14.16□□□□□ -0.14
USP49-202ENST00000373010 J3QLI3 93 aa14.16□□□□□ -0.14
USP49-202ENST00000373010 SPANXN1Q5VSR9 72 aa14.16□□□□□ -0.14
USP49-202ENST00000373010 WFDC3Q8IUB2 231 aa14.16□□□□□ -0.14
USP49-202ENST00000373010 SNAI2O43623 268 aa14.15□□□□□ -0.14
USP49-202ENST00000373010 ZNF580Q9UK33 172 aa14.15□□□□□ -0.14
USP49-202ENST00000373010 PTPN13Q12923 2485 aa14.15□□□□□ -0.14
USP49-202ENST00000373010 TRAV26-2A0A0B4J265 109 aa14.15□□□□□ -0.14
USP49-202ENST00000373010 SCRT2Q9NQ03 307 aa14.15□□□□□ -0.14
USP49-202ENST00000373010 DOPEY2Q9Y3R5 2298 aa14.15□□□□□ -0.14
USP49-202ENST00000373010 CR1P17927 2039 aa14.15□□□□□ -0.14
USP49-202ENST00000373010 RNASE4P34096 147 aaKnown RBP14.14□□□□□ -0.15
USP49-202ENST00000373010 CACNG7P62955 275 aa14.14□□□□□ -0.15
USP49-202ENST00000373010 IGHV4-4A0A075B6R2 117 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 TRAV21A0A0B4J279 112 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 SLC25A34Q6PIV7 304 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 SMIM15Q7Z3B0 74 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 IFI27L1Q96BM0 104 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 FAM19A4Q96LR4 140 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 GOLT1BQ9Y3E0 138 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 ABCA12Q86UK0 2595 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 K7EMT4 169 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 IGHV4-31P0DP07 118 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 MS4A6AQ9H2W1 248 aa14.13□□□□□ -0.15
USP49-202ENST00000373010 LEPP41159 167 aa14.12□□□□□ -0.15
USP49-202ENST00000373010 ANXA2RQ3ZCQ2 193 aa14.12□□□□□ -0.15
USP49-202ENST00000373010 OR2K2Q8NGT1 345 aa14.12□□□□□ -0.15
USP49-202ENST00000373010 C18orf15Q96N68 181 aa14.12□□□□□ -0.15
USP49-202ENST00000373010 LINC01546A6NGU7 62 aa14.12□□□□□ -0.15
USP49-202ENST00000373010 TMEM208Q9BTX3 173 aa14.12□□□□□ -0.15
USP49-202ENST00000373010 NXT2Q9NPJ8 142 aaKnown RBP14.12□□□□□ -0.15
USP49-202ENST00000373010 LGALS9BQ3B8N2 356 aa14.11□□□□□ -0.15
USP49-202ENST00000373010 LGALS9CQ6DKI2 356 aa14.11□□□□□ -0.15
USP49-202ENST00000373010 NRACQ8N912 160 aa14.11□□□□□ -0.15
USP49-202ENST00000373010 VPREB3Q9UKI3 123 aa14.11□□□□□ -0.15
USP49-202ENST00000373010 MXRA5Q9NR99 2828 aa14.1□□□□□ -0.15
USP49-202ENST00000373010 M0R381 172 aa14.1□□□□□ -0.15
USP49-202ENST00000373010 FSHBP01225 129 aa14.1□□□□□ -0.15
USP49-202ENST00000373010 DCANP1Q8TF63 244 aa14.1□□□□□ -0.15
USP49-202ENST00000373010 IGLV2-18A0A075B6J9 118 aa14.1□□□□□ -0.15
USP49-202ENST00000373010 S100A4P26447 101 aaKnown RBP14.1□□□□□ -0.15
USP49-202ENST00000373010 FCER1GP30273 86 aa14.1□□□□□ -0.15
USP49-202ENST00000373010 WFDC12Q8WWY7 111 aa14.1□□□□□ -0.15
USP49-202ENST00000373010 GNRH2O43555 120 aa14.09□□□□□ -0.15
USP49-202ENST00000373010 ASIPP42127 132 aa14.09□□□□□ -0.15
USP49-202ENST00000373010 Q8N8P6 123 aa14.09□□□□□ -0.15
USP49-202ENST00000373010 BEX4Q9NWD9 120 aaPredicted RBP14.09□□□□□ -0.15
USP49-202ENST00000373010 ANKRD39Q53RE8 183 aa14.09□□□□□ -0.15
USP49-202ENST00000373010 Q6YL49 198 aa14.09□□□□□ -0.15
USP49-202ENST00000373010 TCTAP57738 103 aa14.08□□□□□ -0.16
USP49-202ENST00000373010 MPV17L2Q567V2 206 aa14.08□□□□□ -0.16
USP49-202ENST00000373010 Q6ZVH6 145 aa14.08□□□□□ -0.16
USP49-202ENST00000373010 APRG1Q8IVJ8 170 aa14.08□□□□□ -0.16
USP49-202ENST00000373010 NAV2Q8IVL1 2488 aa14.08□□□□□ -0.16
USP49-202ENST00000373010 TMEM89A2RUT3 159 aa14.07□□□□□ -0.16
USP49-202ENST00000373010 ID1P41134 155 aa14.07□□□□□ -0.16
USP49-202ENST00000373010 Q5PR19 223 aa14.07□□□□□ -0.16
USP49-202ENST00000373010 TMEM158Q8WZ71 300 aa14.07□□□□□ -0.16
USP49-202ENST00000373010 ZNF702PQ9H963 129 aa14.07□□□□□ -0.16
USP49-202ENST00000373010 DLEU1O43261 78 aa14.07□□□□□ -0.16
USP49-202ENST00000373010 HOXA3O43365 443 aaPredicted RBP14.07□□□□□ -0.16
USP49-202ENST00000373010 DKK2Q9UBU2 259 aa14.07□□□□□ -0.16
USP49-202ENST00000373010 EPG5Q9HCE0 2579 aa14.07□□□□□ -0.16
USP49-202ENST00000373010 COX8AP10176 69 aa14.06□□□□□ -0.16
USP49-202ENST00000373010 DEFB113Q30KQ7 82 aa14.06□□□□□ -0.16
USP49-202ENST00000373010 PHLDA3Q9Y5J5 127 aa14.06□□□□□ -0.16
USP49-202ENST00000373010 TEX15Q9BXT5 2789 aa14.06□□□□□ -0.16
USP49-202ENST00000373010 SYNJ2BPP57105 145 aa14.06□□□□□ -0.16
USP49-202ENST00000373010 NUDT3O95989 172 aa14.05□□□□□ -0.16
USP49-202ENST00000373010 ZNF688P0C7X2 276 aa14.05□□□□□ -0.16
USP49-202ENST00000373010 C14orf178Q8N769 122 aaPredicted RBP14.05□□□□□ -0.16
USP49-202ENST00000373010 DUX5Q96PT3 197 aa14.05□□□□□ -0.16
USP49-202ENST00000373010 IGHV4OR15-8A0A075B7B6 117 aa14.05□□□□□ -0.16
USP49-202ENST00000373010 A0A087WW49 117 aa14.05□□□□□ -0.16
USP49-202ENST00000373010 TRBV7-9A0A0J9YWB2 115 aa14.05□□□□□ -0.16
USP49-202ENST00000373010 CD5LO43866 347 aa14.04□□□□□ -0.16
USP49-202ENST00000373010 NPSP0C0P6 89 aa14.04□□□□□ -0.16
USP49-202ENST00000373010 RNASE3P12724 160 aaKnown RBP14.04□□□□□ -0.16
USP49-202ENST00000373010 PRSS47A8MTI9 375 aa14.04□□□□□ -0.16
USP49-202ENST00000373010 KLLNB2CW77 178 aa14.04□□□□□ -0.16
USP49-202ENST00000373010 LGALS1P09382 135 aaKnown RBP14.04□□□□□ -0.16
USP49-202ENST00000373010 PSMG4Q5JS54 123 aa14.04□□□□□ -0.16
USP49-202ENST00000373010 MRAP2Q96G30 205 aa14.04□□□□□ -0.16
USP49-202ENST00000373010 Q96MF0 132 aa14.04□□□□□ -0.16
USP49-202ENST00000373010 MUC4Q99102 2169 aa14.03□□□□□ -0.16
USP49-202ENST00000373010 C2orf91Q6ZV80 131 aa14.03□□□□□ -0.16
USP49-202ENST00000373010 PRRC2AP48634 2157 aaKnown RBP14.02□□□□□ -0.16
USP49-202ENST00000373010 FGF6P10767 208 aa14.02□□□□□ -0.16
USP49-202ENST00000373010 LAGE3Q14657 143 aa14.02□□□□□ -0.16
USP49-202ENST00000373010 DEFB125Q8N687 156 aa14.02□□□□□ -0.16
USP49-202ENST00000373010 MYOZ3Q8TDC0 251 aa14.02□□□□□ -0.16
USP49-202ENST00000373010 DPH3P1Q9H4G8 78 aa14.02□□□□□ -0.16
USP49-202ENST00000373010 CREBBPQ92793 2442 aa14.02□□□□□ -0.16
USP49-202ENST00000373010 IGKV3-20P01619 116 aa14.02□□□□□ -0.17
USP49-202ENST00000373010 PRSS1P07477 247 aa14.02□□□□□ -0.17
USP49-202ENST00000373010 ELANEP08246 267 aa14.02□□□□□ -0.17
USP49-202ENST00000373010 SMIM17P0DL12 118 aa14.02□□□□□ -0.17
USP49-202ENST00000373010 MED14OSP0DP75 135 aa14.02□□□□□ -0.17
USP49-202ENST00000373010 BVES-AS1Q5T3Y7 98 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms