RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 IGHV7-4-1A0A0J9YVY3 117 aa11.36□□□□□ -0.59
COL9A2-202ENST00000372748 CLEC3BP05452 202 aa11.36□□□□□ -0.59
COL9A2-202ENST00000372748 PRTN3P24158 256 aa11.36□□□□□ -0.59
COL9A2-202ENST00000372748 C15orf32Q32M92 178 aa11.36□□□□□ -0.59
COL9A2-202ENST00000372748 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.36□□□□□ -0.59
COL9A2-202ENST00000372748 VMO1Q7Z5L0 202 aa11.36□□□□□ -0.59
COL9A2-202ENST00000372748 A0A1B0GWB2 263 aa11.35□□□□□ -0.59
COL9A2-202ENST00000372748 BUB3O43684 328 aa11.35□□□□□ -0.59
COL9A2-202ENST00000372748 TRBV7-3A0A075B6L6 115 aa11.35□□□□□ -0.59
COL9A2-202ENST00000372748 ODF3BA8MYP8 253 aa11.35□□□□□ -0.59
COL9A2-202ENST00000372748 H3BVH4 76 aa11.35□□□□□ -0.59
COL9A2-202ENST00000372748 PLNP26678 52 aa11.35□□□□□ -0.59
COL9A2-202ENST00000372748 PRO0461Q9UI25 63 aa11.35□□□□□ -0.59
COL9A2-202ENST00000372748 OR11H12B2RN74 326 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 ECSCRQ19T08 205 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 OR11H1Q8NG94 326 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 OR11H2Q8NH07 326 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 WFDC12Q8WWY7 111 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 HLA-DRB4P13762 266 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 ZFP36P26651 326 aaKnown RBP11.34□□□□□ -0.59
COL9A2-202ENST00000372748 TAL2Q16559 108 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 FBXL19-AS1Q494R0 122 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 SPATA25Q9BR10 227 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 C20orf78Q9BR46 151 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 HLA-DRB4X5D2U9 266 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 SCGB1A1P11684 91 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 TMEM78Q5T7P6 136 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 ATP6V0BQ99437 205 aa11.34□□□□□ -0.59
COL9A2-202ENST00000372748 IGHV7-81A0A0B4J1V7 117 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 MYMXA0A1B0GTQ4 84 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 F8VRH5 84 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 M0R1W7 72 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 NDUFS8O00217 210 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 Q5PR19 223 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 PGPEP1Q9NXJ5 209 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 H7C1H1 209 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 SCGB2A1O75556 95 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 MORN3Q6PF18 240 aaPredicted RBP11.33□□□□□ -0.6
COL9A2-202ENST00000372748 DEFB104AQ8WTQ1 72 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 SCGB3A1Q96QR1 104 aa11.33□□□□□ -0.6
COL9A2-202ENST00000372748 IGF1P05019 195 aa11.32□□□□□ -0.6
COL9A2-202ENST00000372748 SCGB2A2Q13296 93 aa11.32□□□□□ -0.6
COL9A2-202ENST00000372748 CLUHP3Q96NS8 147 aa11.32□□□□□ -0.6
COL9A2-202ENST00000372748 ZFAND3Q9H8U3 227 aa11.32□□□□□ -0.6
COL9A2-202ENST00000372748 A0A1B0GV72 72 aa11.32□□□□□ -0.6
COL9A2-202ENST00000372748 M0R381 172 aa11.32□□□□□ -0.6
COL9A2-202ENST00000372748 APOMO95445 188 aa11.32□□□□□ -0.6
COL9A2-202ENST00000372748 CLEC19AQ6UXS0 136 aa11.32□□□□□ -0.6
COL9A2-202ENST00000372748 MRPL16Q9NX20 251 aaKnown RBP11.32□□□□□ -0.6
COL9A2-202ENST00000372748 TRAV8-2A0A0B4J237 113 aa11.31□□□□□ -0.6
COL9A2-202ENST00000372748 HOXA3O43365 443 aaPredicted RBP11.31□□□□□ -0.6
COL9A2-202ENST00000372748 ZNF502Q8TBZ5 544 aa11.31□□□□□ -0.6
COL9A2-202ENST00000372748 SMIM2Q9BVW6 85 aa11.31□□□□□ -0.6
COL9A2-202ENST00000372748 LGALS1P09382 135 aaKnown RBP11.31□□□□□ -0.6
COL9A2-202ENST00000372748 RAB9AP51151 201 aa11.31□□□□□ -0.6
COL9A2-202ENST00000372748 C11orf71Q6IPW1 123 aa11.31□□□□□ -0.6
COL9A2-202ENST00000372748 CFAP46Q8IYW2 2715 aa11.31□□□□□ -0.6
COL9A2-202ENST00000372748 RPL39LQ96EH5 51 aaKnown RBP11.31□□□□□ -0.6
COL9A2-202ENST00000372748 A0A1W2PPR1 153 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 CLPSL1A2RUU4 121 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 PRR9Q5T870 116 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 LOC107984156A0A0G2JMH3 177 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 RBAKDNA6NC62 111 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 LINC01549A6NIU2 74 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 SCGB1D4Q6XE38 83 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 C8orf86Q6ZUL3 223 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 ARL17AQ8IVW1 177 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 SLC50A1Q9BRV3 221 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 PRADC1Q9BSG0 188 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 HIF1ANQ9NWT6 349 aa11.3□□□□□ -0.6
COL9A2-202ENST00000372748 G3V318 75 aa11.29□□□□□ -0.6
COL9A2-202ENST00000372748 CKS1BP61024 79 aa11.29□□□□□ -0.6
COL9A2-202ENST00000372748 PLEKHB2Q96CS7 222 aa11.29□□□□□ -0.6
COL9A2-202ENST00000372748 Q8N6K4 173 aa11.29□□□□□ -0.6
COL9A2-202ENST00000372748 C14orf178Q8N769 122 aaPredicted RBP11.29□□□□□ -0.6
COL9A2-202ENST00000372748 SYT8Q8NBV8 401 aa11.29□□□□□ -0.6
COL9A2-202ENST00000372748 KLHL30-AS1Q8NEE0 82 aa11.29□□□□□ -0.6
COL9A2-202ENST00000372748 ZNF418Q8TF45 676 aaPredicted RBP11.29□□□□□ -0.6
COL9A2-202ENST00000372748 HIVEP3Q5T1R4 2406 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 ZNF815PA8K554 130 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 SMCPP49901 116 aaPredicted RBP11.28□□□□□ -0.6
COL9A2-202ENST00000372748 EMP1P54849 157 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 DEFB1P60022 68 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 LY6DQ14210 128 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 ZFP2Q6ZN57 461 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 PTH2Q96A98 100 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 CCDC140Q96MF4 163 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 LINC01548A6NM66 108 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 SUMO2P61956 95 aaKnown RBP11.28□□□□□ -0.6
COL9A2-202ENST00000372748 SRSF9Q13242 221 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL9A2-202ENST00000372748 NFE4Q86UQ8 179 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 Q8N9W7 124 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 NEXN-AS1Q8NBZ9 246 aa11.28□□□□□ -0.6
COL9A2-202ENST00000372748 IGSF10Q6WRI0 2623 aa11.27□□□□□ -0.6
COL9A2-202ENST00000372748 TRAV12-1A0A0B4J245 112 aa11.27□□□□□ -0.6
COL9A2-202ENST00000372748 ATP6V0E1O15342 81 aa11.27□□□□□ -0.6
COL9A2-202ENST00000372748 PSMB2P49721 201 aa11.27□□□□□ -0.6
COL9A2-202ENST00000372748 KLRB1Q12918 225 aa11.27□□□□□ -0.6
COL9A2-202ENST00000372748 FOXI1Q12951 378 aa11.27□□□□□ -0.6
COL9A2-202ENST00000372748 RASL10AQ92737 203 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms