RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 IGHV3-11P01762 117 aa13.72□□□□□ -0.21
CD40-201ENST00000372276 RPL11P62913 178 aaKnown RBP13.72□□□□□ -0.21
CD40-201ENST00000372276 AKAP6Q13023 2319 aa13.71□□□□□ -0.21
CD40-201ENST00000372276 BAHCC1Q9P281 2608 aa13.71□□□□□ -0.21
CD40-201ENST00000372276 COL12A1Q99715 3063 aa13.71□□□□□ -0.21
CD40-201ENST00000372276 NUDT3O95989 172 aa13.71□□□□□ -0.22
CD40-201ENST00000372276 EVI2AP22794 236 aa13.71□□□□□ -0.22
CD40-201ENST00000372276 S100A4P26447 101 aaKnown RBP13.71□□□□□ -0.22
CD40-201ENST00000372276 LAGE3Q14657 143 aa13.71□□□□□ -0.22
CD40-201ENST00000372276 IGLV2-18A0A075B6J9 118 aa13.7□□□□□ -0.22
CD40-201ENST00000372276 COX6B1P14854 86 aa13.7□□□□□ -0.22
CD40-201ENST00000372276 MPV17L2Q567V2 206 aa13.7□□□□□ -0.22
CD40-201ENST00000372276 BVES-AS1Q5T3Y7 98 aa13.7□□□□□ -0.22
CD40-201ENST00000372276 C20orf78Q9BR46 151 aa13.7□□□□□ -0.22
CD40-201ENST00000372276 USP9YO00507 2555 aaPredicted RBP13.69□□□□□ -0.22
CD40-201ENST00000372276 M0R381 172 aa13.69□□□□□ -0.22
CD40-201ENST00000372276 PSMB8P28062 276 aa13.69□□□□□ -0.22
CD40-201ENST00000372276 SEC11AP67812 179 aa13.69□□□□□ -0.22
CD40-201ENST00000372276 KIR3DS1Q14943 382 aa13.69□□□□□ -0.22
CD40-201ENST00000372276 NRACQ8N912 160 aa13.69□□□□□ -0.22
CD40-201ENST00000372276 MYOZ3Q8TDC0 251 aa13.69□□□□□ -0.22
CD40-201ENST00000372276 ODF3Q96PU9 254 aa13.69□□□□□ -0.22
CD40-201ENST00000372276 DPH3P1Q9H4G8 78 aa13.69□□□□□ -0.22
CD40-201ENST00000372276 CD5LO43866 347 aa13.68□□□□□ -0.22
CD40-201ENST00000372276 TM4SF20Q53R12 229 aa13.68□□□□□ -0.22
CD40-201ENST00000372276 BOD1L2Q8IYS8 172 aa13.68□□□□□ -0.22
CD40-201ENST00000372276 MCRIP2Q9BUT9 160 aaKnown RBP13.68□□□□□ -0.22
CD40-201ENST00000372276 ZMAT4Q9H898 229 aa13.68□□□□□ -0.22
CD40-201ENST00000372276 LINC01549A6NIU2 74 aa13.68□□□□□ -0.22
CD40-201ENST00000372276 H3BVH4 76 aa13.68□□□□□ -0.22
CD40-201ENST00000372276 ORMDL2Q53FV1 153 aa13.68□□□□□ -0.22
CD40-201ENST00000372276 PHLDA3Q9Y5J5 127 aa13.68□□□□□ -0.22
CD40-201ENST00000372276 AVPP01185 164 aa13.67□□□□□ -0.22
CD40-201ENST00000372276 PRSS1P07477 247 aa13.67□□□□□ -0.22
CD40-201ENST00000372276 SPTAN1Q13813 2472 aaKnown RBP13.67□□□□□ -0.22
CD40-201ENST00000372276 ELANEP08246 267 aa13.66□□□□□ -0.22
CD40-201ENST00000372276 DEFB112Q30KQ8 113 aa13.66□□□□□ -0.22
CD40-201ENST00000372276 PRR9Q5T870 116 aa13.66□□□□□ -0.22
CD40-201ENST00000372276 TMEM158Q8WZ71 300 aa13.66□□□□□ -0.22
CD40-201ENST00000372276 NPSP0C0P6 89 aa13.65□□□□□ -0.22
CD40-201ENST00000372276 SMIM17P0DL12 118 aa13.65□□□□□ -0.22
CD40-201ENST00000372276 HLA-DRB4P13762 266 aa13.65□□□□□ -0.22
CD40-201ENST00000372276 UBE2V1Q13404 147 aa13.65□□□□□ -0.22
CD40-201ENST00000372276 AP1S3Q96PC3 154 aa13.65□□□□□ -0.22
CD40-201ENST00000372276 HLA-DRB4X5D2U9 266 aa13.65□□□□□ -0.22
CD40-201ENST00000372276 DOPEY2Q9Y3R5 2298 aa13.65□□□□□ -0.22
CD40-201ENST00000372276 A0A096LNT2 108 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 A1L4Q6 167 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 KLLNB2CW77 178 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 FGF6P10767 208 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 RNASE4P34096 147 aaKnown RBP13.64□□□□□ -0.23
CD40-201ENST00000372276 ODF1Q14990 250 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 ANKRD39Q53RE8 183 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 TMEM97Q5BJF2 176 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 SMIM2Q9BVW6 85 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 PTPN13Q12923 2485 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 LGALS9O00182 355 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 DPM2O94777 84 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 NXPH4O95158 308 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 IGKCP01834 107 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 PTTG1IPP53801 180 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 HSD52Q0P140 79 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 ANXA2RQ3ZCQ2 193 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 Q6ZS46 218 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 C2orf91Q6ZV80 131 aa13.64□□□□□ -0.23
CD40-201ENST00000372276 BEX4Q9NWD9 120 aaPredicted RBP13.64□□□□□ -0.23
CD40-201ENST00000372276 UTP20O75691 2785 aaKnown RBP13.63□□□□□ -0.23
CD40-201ENST00000372276 A6NDN8 102 aa13.63□□□□□ -0.23
CD40-201ENST00000372276 IGHV4-59P01825 116 aa13.63□□□□□ -0.23
CD40-201ENST00000372276 FOSL1P15407 271 aa13.63□□□□□ -0.23
CD40-201ENST00000372276 SNRPD3P62318 126 aaKnown RBP13.63□□□□□ -0.23
CD40-201ENST00000372276 POM121L12Q8N7R1 296 aa13.63□□□□□ -0.23
CD40-201ENST00000372276 VPREB3Q9UKI3 123 aa13.63□□□□□ -0.23
CD40-201ENST00000372276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.63□□□□□ -0.23
CD40-201ENST00000372276 TGFAP01135 160 aa13.62□□□□□ -0.23
CD40-201ENST00000372276 GATA1P15976 413 aaPredicted RBP13.62□□□□□ -0.23
CD40-201ENST00000372276 FXYD7P58549 80 aa13.62□□□□□ -0.23
CD40-201ENST00000372276 RPL32P62910 135 aaKnown RBP13.62□□□□□ -0.23
CD40-201ENST00000372276 LRRC75A-AS1Q8N1F1 130 aa13.62□□□□□ -0.23
CD40-201ENST00000372276 DCANP1Q8TF63 244 aa13.62□□□□□ -0.23
CD40-201ENST00000372276 TRAV12-1A0A0B4J245 112 aa13.61□□□□□ -0.23
CD40-201ENST00000372276 GAS8-AS1O95177 125 aa13.61□□□□□ -0.23
CD40-201ENST00000372276 SUMO2P61956 95 aaKnown RBP13.61□□□□□ -0.23
CD40-201ENST00000372276 FAM159AQ6UWV7 190 aa13.61□□□□□ -0.23
CD40-201ENST00000372276 C18orf15Q96N68 181 aa13.61□□□□□ -0.23
CD40-201ENST00000372276 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.61□□□□□ -0.23
CD40-201ENST00000372276 FSHBP01225 129 aa13.61□□□□□ -0.23
CD40-201ENST00000372276 LGALS1P09382 135 aaKnown RBP13.61□□□□□ -0.23
CD40-201ENST00000372276 Q6YL49 198 aa13.61□□□□□ -0.23
CD40-201ENST00000372276 HIGD1BQ9P298 99 aa13.61□□□□□ -0.23
CD40-201ENST00000372276 DKK2Q9UBU2 259 aa13.61□□□□□ -0.23
CD40-201ENST00000372276 ASH1LQ9NR48 2969 aaKnown RBP13.6□□□□□ -0.23
CD40-201ENST00000372276 TAX1BP3O14907 124 aa13.6□□□□□ -0.23
CD40-201ENST00000372276 DUSP14O95147 198 aaKnown RBP13.6□□□□□ -0.23
CD40-201ENST00000372276 PLNP26678 52 aa13.6□□□□□ -0.23
CD40-201ENST00000372276 FOXC2Q99958 501 aa13.6□□□□□ -0.23
CD40-201ENST00000372276 HECTD1Q9ULT8 2610 aa13.59□□□□□ -0.23
CD40-201ENST00000372276 A0A087WX48 190 aa13.59□□□□□ -0.23
CD40-201ENST00000372276 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
CD40-201ENST00000372276 UBE2E2Q96LR5 201 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms