RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 CACNA1BQ00975 2339 aa7.7□□□□□ -1.18
COL4A6-202ENST00000372216 KRTAP27-1Q3LI81 207 aa7.7□□□□□ -1.18
COL4A6-202ENST00000372216 IGLC1P0CG04 106 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 SEM1Q6ZVN7 128 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 HIST1H2BLQ99880 126 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 SPRY4Q9C004 299 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 SDHAF1A6NFY7 115 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 TRACP01848 142 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 ICOSQ9Y6W8 199 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 CFHR4Q92496 578 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 SPATA25Q9BR10 227 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 FGF23Q9GZV9 251 aaPredicted RBP7.69□□□□□ -1.18
COL4A6-202ENST00000372216 KLK5Q9Y337 293 aaPredicted RBP7.69□□□□□ -1.18
COL4A6-202ENST00000372216 COLCA2A8K830 154 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 FOXI2Q6ZQN5 318 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 CYYR1Q96J86 154 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 COL4A3Q01955 1670 aa7.69□□□□□ -1.18
COL4A6-202ENST00000372216 HIST3H2BBQ8N257 126 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 PRR25Q96S07 402 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 TM2D2Q9BX73 214 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 DOCK9Q9BZ29 2069 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 GPHB5Q86YW7 130 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 BOD1L2Q8IYS8 172 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 C17orf77Q96MU5 243 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 RITA1Q96K30 269 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 RTTNQ86VV8 2226 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 IGKV2-24A0A0C4DH68 120 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 M0R2N4 97 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 C2orf66Q6UXQ4 117 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 COL6A6A6NMZ7 2263 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 UBE2CO00762 179 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 C14orf132Q9NPU4 83 aa7.68□□□□□ -1.18
COL4A6-202ENST00000372216 Q8NA96 180 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 NCOR1O75376 2440 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 ZNF726P1Q15940 193 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 ADAMTSL5Q6ZMM2 481 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 RNF183Q96D59 192 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 CNOT1A5YKK6 2376 aaKnown RBP7.67□□□□□ -1.18
COL4A6-202ENST00000372216 IGLC7A0M8Q6 106 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 INAFM2P0DMQ5 153 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 FXYD5Q96DB9 178 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 FAM110AQ9BQ89 295 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 PRO3102Q9H379 93 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 INTS1Q8N201 2190 aaKnown RBP7.67□□□□□ -1.18
COL4A6-202ENST00000372216 BLCAPP62952 87 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 ZNF491Q8N8L2 437 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 TMEM141Q96I45 108 aa7.67□□□□□ -1.18
COL4A6-202ENST00000372216 A0A096LNI7 61 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 SYS1-DBNDD2H3BUS1 97 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 ZC2HC1AQ96GY0 325 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 RHOHQ15669 191 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 Q8N8P6 123 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 LYPD6BQ8NI32 183 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 IGHV7-81A0A0B4J1V7 117 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 K7EMI3 77 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 EGR2P11161 476 aaPredicted RBP7.66□□□□□ -1.18
COL4A6-202ENST00000372216 FAM104BQ5XKR9 115 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 NDUFA12Q9UI09 145 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 TRAV4A0A0B4J268 109 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
COL4A6-202ENST00000372216 POU2AF1Q16633 256 aa7.65□□□□□ -1.18
COL4A6-202ENST00000372216 MRPL51Q4U2R6 128 aaKnown RBP7.65□□□□□ -1.18
COL4A6-202ENST00000372216 HEATR5AQ86XA9 2040 aa7.65□□□□□ -1.18
COL4A6-202ENST00000372216 WISP2O76076 250 aa7.65□□□□□ -1.18
COL4A6-202ENST00000372216 AMTNQ6UX39 209 aa7.65□□□□□ -1.18
COL4A6-202ENST00000372216 MRPL53Q96EL3 112 aaKnown RBP7.65□□□□□ -1.18
COL4A6-202ENST00000372216 IGHV4OR15-8A0A075B7B6 117 aa7.65□□□□□ -1.18
COL4A6-202ENST00000372216 A0A087WW49 117 aa7.65□□□□□ -1.18
COL4A6-202ENST00000372216 C3orf79P0CE67 100 aa7.65□□□□□ -1.18
COL4A6-202ENST00000372216 SPART-AS1P0CW21 52 aa7.65□□□□□ -1.18
COL4A6-202ENST00000372216 FGF6P10767 208 aa7.65□□□□□ -1.18
COL4A6-202ENST00000372216 CT83Q5H943 113 aa7.65□□□□□ -1.19
COL4A6-202ENST00000372216 WIPF2Q8TF74 440 aaPredicted RBP7.65□□□□□ -1.19
COL4A6-202ENST00000372216 KIAA2026Q5HYC2 2103 aa7.65□□□□□ -1.19
COL4A6-202ENST00000372216 K7ERJ3 54 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 C5orf56Q8N8D9 126 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 WFDC9Q8NEX5 89 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 ZNF407Q9C0G0 2248 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 DYNAPQ8N1N2 210 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 OBSL1O75147 1896 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 KMT2EQ8IZD2 1858 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 FAM231BA6NCW3 169 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 AJUBAQ96IF1 538 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 CACNA1DQ01668 2161 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 COX7B2Q8TF08 81 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 ACACAQ13085 2346 aa7.64□□□□□ -1.19
COL4A6-202ENST00000372216 H0Y9J4 135 aa7.63□□□□□ -1.19
COL4A6-202ENST00000372216 Q8NFD4 153 aa7.63□□□□□ -1.19
COL4A6-202ENST00000372216 SPTBN2O15020 2390 aa7.63□□□□□ -1.19
COL4A6-202ENST00000372216 ADCYAP1P18509 176 aa7.63□□□□□ -1.19
COL4A6-202ENST00000372216 IGLV2-18A0A075B6J9 118 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 INAFM1C9JVW0 142 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 CHD3Q12873 2000 aaKnown RBP7.62□□□□□ -1.19
COL4A6-202ENST00000372216 C19orf84I3L1E1 186 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 SMIM27A0A1W2PRY6 76 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 SLAQ13239 276 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 HIGD2BQ4VC39 106 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 CARD19Q96LW7 228 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 Q9H8V8 135 aa7.62□□□□□ -1.19
COL4A6-202ENST00000372216 CACNA1GO43497 2377 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms