RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 CT83Q5H943 113 aa13.2□□□□□ -0.3
VEGFA-205ENST00000372067 PRSS22Q9GZN4 317 aa13.2□□□□□ -0.3
VEGFA-205ENST00000372067 LEPROTL1O95214 131 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 TM4SF20Q53R12 229 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 WIPF2Q8TF74 440 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-205ENST00000372067 TMEM191AQ9H0A3 160 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 MS4A6AQ9H2W1 248 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 SPINK8P0C7L1 97 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 SRD5A1P18405 259 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 UFC1Q9Y3C8 167 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 PRAC2D3DTV9 90 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 CCDC140Q96MF4 163 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 PRR25Q96S07 402 aa13.19□□□□□ -0.3
VEGFA-205ENST00000372067 NCR2O95944 276 aa13.18□□□□□ -0.3
VEGFA-205ENST00000372067 GAGE5Q13069 117 aa13.18□□□□□ -0.3
VEGFA-205ENST00000372067 GAGE6Q13070 117 aa13.18□□□□□ -0.3
VEGFA-205ENST00000372067 TRBV7-1A0A0A6YYK4 115 aa13.18□□□□□ -0.3
VEGFA-205ENST00000372067 GFRA4Q9GZZ7 299 aa13.18□□□□□ -0.3
VEGFA-205ENST00000372067 FLNCQ14315 2725 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 B4DSR2 109 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 K7ERJ3 54 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 XGP55808 180 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 TM2D2Q9BX73 214 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 CRIP1P50238 77 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 FXYD7P58549 80 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 AMN1Q8IY45 258 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 GLMPQ8WWB7 406 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 SONP18583 2426 aaKnown RBP13.17□□□□□ -0.3
VEGFA-205ENST00000372067 CKS2P33552 79 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 SMAD5-AS1Q9Y6J3 95 aa13.17□□□□□ -0.3
VEGFA-205ENST00000372067 SMKR1H3BMG3 65 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 NHLRC4P0CG21 123 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-205ENST00000372067 IL17RELQ6ZVW7 336 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 A0A1B0GXF2 115 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 BUB3O43684 328 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 TRBV12-3P01733 135 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 ANXA2RQ3ZCQ2 193 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 OR8A1Q8NGG7 326 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 ITPR1Q14643 2758 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 FABP5P3A8MUU1 101 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 K7EMI3 77 aa13.16□□□□□ -0.3
VEGFA-205ENST00000372067 MRPS12O15235 138 aaKnown RBP13.16□□□□□ -0.3
VEGFA-205ENST00000372067 SLC50A1Q9BRV3 221 aa13.15□□□□□ -0.3
VEGFA-205ENST00000372067 KLK15Q9H2R5 256 aa13.15□□□□□ -0.3
VEGFA-205ENST00000372067 AP5S1Q9NUS5 200 aa13.15□□□□□ -0.3
VEGFA-205ENST00000372067 IGSF10Q6WRI0 2623 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 TMEM8BA6NDV4 472 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 D6R8Y8 96 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 PRELID3AQ96N28 172 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 DUX5Q96PT3 197 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 H3BMG7 143 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 S100A4P26447 101 aaKnown RBP13.14□□□□□ -0.31
VEGFA-205ENST00000372067 KHDC1LQ5JSQ8 128 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 LINC01545Q5VT33 79 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 OR4X2Q8NGF9 303 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 AJUBAQ96IF1 538 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 C1QTNF4Q9BXJ3 329 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 HAX1O00165 279 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 MAP1LC3CQ9BXW4 147 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 HSPB8Q9UJY1 196 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
VEGFA-205ENST00000372067 ANKRD17O75179 2603 aaKnown RBP13.13□□□□□ -0.31
VEGFA-205ENST00000372067 RNF223E7ERA6 249 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 ZNF80P51504 273 aaPredicted RBP13.13□□□□□ -0.31
VEGFA-205ENST00000372067 SORL1Q92673 2214 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 OR5AL1P0C617 328 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 DEFB1P60022 68 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 Q6AWC8 147 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 SYT8Q8NBV8 401 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 CITED1Q99966 193 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 CFAP46Q8IYW2 2715 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 ANAPC13Q9BS18 74 aa13.13□□□□□ -0.31
VEGFA-205ENST00000372067 J3QR89 54 aa13.12□□□□□ -0.31
VEGFA-205ENST00000372067 AMTNQ6UX39 209 aa13.12□□□□□ -0.31
VEGFA-205ENST00000372067 Q6ZS46 218 aa13.12□□□□□ -0.31
VEGFA-205ENST00000372067 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
VEGFA-205ENST00000372067 FXYD2P54710 66 aa13.12□□□□□ -0.31
VEGFA-205ENST00000372067 ZFAND3Q9H8U3 227 aa13.12□□□□□ -0.31
VEGFA-205ENST00000372067 F8W1H4 67 aa13.12□□□□□ -0.31
VEGFA-205ENST00000372067 SPANXN1Q5VSR9 72 aa13.12□□□□□ -0.31
VEGFA-205ENST00000372067 UNQ9165/PRO28630Q6UXU0 137 aa13.12□□□□□ -0.31
VEGFA-205ENST00000372067 Q6ZUT4 128 aa13.12□□□□□ -0.31
VEGFA-205ENST00000372067 IGHV4-59P01825 116 aa13.11□□□□□ -0.31
VEGFA-205ENST00000372067 PRO0461Q9UI25 63 aa13.11□□□□□ -0.31
VEGFA-205ENST00000372067 CSMD1Q96PZ7 3565 aa13.11□□□□□ -0.31
VEGFA-205ENST00000372067 FAM223BA6NKX1 122 aa13.11□□□□□ -0.31
VEGFA-205ENST00000372067 FAM223AQ8IWN6 122 aa13.11□□□□□ -0.31
VEGFA-205ENST00000372067 OR10J6PQ8NGY7 276 aa13.11□□□□□ -0.31
VEGFA-205ENST00000372067 AGPAT4-IT1Q9H0P7 198 aa13.11□□□□□ -0.31
VEGFA-205ENST00000372067 ABCA2Q9BZC7 2435 aa13.11□□□□□ -0.31
VEGFA-205ENST00000372067 AVPP01185 164 aa13.1□□□□□ -0.31
VEGFA-205ENST00000372067 MYO9AB2RTY4 2548 aa13.1□□□□□ -0.31
VEGFA-205ENST00000372067 NPIPB6E9PJ23 425 aa13.1□□□□□ -0.31
VEGFA-205ENST00000372067 ORMDL3Q8N138 153 aa13.1□□□□□ -0.31
VEGFA-205ENST00000372067 MSRB1Q9NZV6 116 aa13.1□□□□□ -0.31
VEGFA-205ENST00000372067 IGKV3-20P01619 116 aa13.1□□□□□ -0.31
VEGFA-205ENST00000372067 EVI2AP22794 236 aa13.1□□□□□ -0.31
VEGFA-205ENST00000372067 IFI27P40305 119 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-205ENST00000372067 DEFB112Q30KQ8 113 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms