RNA–Protein interactions for RNA: ENST00000371039.5

SGIP1-204, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SGIP1, Length 4,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-204ENST00000371039 IGFL4Q6B9Z1 124 aa3.7□□□□□ -1.82
SGIP1-204ENST00000371039 SH2D6Q7Z4S9 175 aa3.7□□□□□ -1.82
SGIP1-204ENST00000371039 C20orf173Q96LM9 149 aa3.7□□□□□ -1.82
SGIP1-204ENST00000371039 OTORQ9NRC9 128 aa3.7□□□□□ -1.82
SGIP1-204ENST00000371039 ATP5LO75964 103 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 APOA2P02652 100 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 FAM27E3Q08E93 113 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 HIST2H2BCQ6DN03 193 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 HIST2H2BDQ6DRA6 164 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 VGLL1Q99990 258 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 PRORYQ9H606 182 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 CNOT1A5YKK6 2376 aaKnown RBP3.69□□□□□ -1.82
SGIP1-204ENST00000371039 CEP250Q9BV73 2442 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 TRBV7-3A0A075B6L6 115 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 TRBV25-1A0A075B6N4 114 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 PRAC2D3DTV9 90 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 NPFFO15130 113 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 CCL8P80075 99 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 NDPQ00604 133 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 KLF17Q5JT82 389 aaPredicted RBP3.69□□□□□ -1.82
SGIP1-204ENST00000371039 NRACQ8N912 160 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 OR8A1Q8NGG7 326 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 MRPL53Q96EL3 112 aaKnown RBP3.69□□□□□ -1.82
SGIP1-204ENST00000371039 FANCD2OSQ96PS1 177 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 RNF7Q9UBF6 113 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 F11RQ9Y624 299 aaKnown RBP3.69□□□□□ -1.82
SGIP1-204ENST00000371039 S4R3C0 116 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 MXRA5Q9NR99 2828 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 ACACBO00763 2458 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 A0A1B0GWB2 263 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 A6NDN8 102 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 TRGV3P03979 118 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 KLRB1Q12918 225 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 TMEM155Q4W5P6 130 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 TMEM219Q86XT9 240 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 BPIFA4PQ86YQ2 179 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 SHANK2-AS3Q9BTD1 123 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 TP53TG1Q9Y2A0 90 aa3.69□□□□□ -1.82
SGIP1-204ENST00000371039 ANK3Q12955 4377 aaKnown RBP3.68□□□□□ -1.82
SGIP1-204ENST00000371039 NCOR2Q9Y618 2525 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 FAM236DA0A1B0GTK5 79 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 RHODO00212 210 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 SH2D1AO60880 128 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 FAM236CP0DP71 79 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 SRD5A1P18405 259 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 AMTNQ6UX39 209 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 GFRALQ6UXV0 394 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 Q8TAT8 98 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 ABCA2Q9BZC7 2435 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 IGKV2-40A0A087WW87 121 aaPredicted RBP3.68□□□□□ -1.82
SGIP1-204ENST00000371039 M0R1B8 84 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 IGKV2D-40P01614 121 aaPredicted RBP3.68□□□□□ -1.82
SGIP1-204ENST00000371039 Q96MF0 132 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 LINC01587Q99440 93 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 CACNA1AO00555 2505 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 ZANQ9Y493 2812 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 POLEQ07864 2286 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 TRBV20-1A0A075B6N2 111 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 IGKV3D-20A0A0C4DH25 116 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 IGHV7-4-1A0A0J9YVY3 117 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 TMEM178BH3BS89 294 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 PRR30Q53SZ7 412 aaPredicted RBP3.68□□□□□ -1.82
SGIP1-204ENST00000371039 ARPC1AQ92747 370 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 CARD19Q96LW7 228 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 SPCS1Q9Y6A9 102 aa3.68□□□□□ -1.82
SGIP1-204ENST00000371039 IGHV1-8P0DP01 117 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 DYNAPQ8N1N2 210 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 AJUBAQ96IF1 538 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 HIGD1BQ9P298 99 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 TIMM8BQ9Y5J9 83 aaPredicted RBP3.67□□□□□ -1.82
SGIP1-204ENST00000371039 TMSB15BA0A087X1C1 80 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 IGLL5B9A064 214 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 IFITM1P13164 125 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 COX6B1P14854 86 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 GRNP28799 593 aaKnown RBP3.67□□□□□ -1.82
SGIP1-204ENST00000371039 SAMD5Q5TGI4 173 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 IFI27L1Q96BM0 104 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 C20orf78Q9BR46 151 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 SPANXCQ9NY87 97 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 PROCRQ9UNN8 238 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 CLPSL1A2RUU4 121 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 H3BMG7 143 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 CD40P25942 277 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 ERHP84090 104 aaKnown RBP3.67□□□□□ -1.82
SGIP1-204ENST00000371039 PRR9Q5T870 116 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 PRELID3AQ96N28 172 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 CHAC1Q9BUX1 264 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 SPTBN2O15020 2390 aa3.67□□□□□ -1.82
SGIP1-204ENST00000371039 RP1L1Q8IWN7 2480 aaPredicted RBP3.67□□□□□ -1.82
SGIP1-204ENST00000371039 A1L4Q6 167 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 CHEK1O14757 476 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 C11orf44Q8N8P7 122 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 PRR25Q96S07 402 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 AMELXQ99217 191 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 MDFICQ9P1T7 246 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 SPTBN4Q9H254 2564 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 FAM208BQ5VWN6 2430 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 TRAV26-2A0A0B4J265 109 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 IGHV1-3A0A0C4DH29 117 aa3.66□□□□□ -1.82
SGIP1-204ENST00000371039 SPRY2O43597 315 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms