RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 IGHV1-69P01742 117 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 CFC1BP0CG36 223 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 CFC1P0CG37 223 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 PRR30Q53SZ7 412 aaPredicted RBP13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 GAGE12JA6NER3 117 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 GAGE4Q13068 117 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 GAGE5Q13069 117 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 GTSF1Q8WW33 167 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 XCL2Q9UBD3 114 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 CTSZQ9UBR2 303 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 FOXE3Q13461 319 aa13.48□□□□□ -0.25
PTP4A1-201ENST00000370651 IGLV2-14P01704 120 aa13.47□□□□□ -0.25
PTP4A1-201ENST00000370651 C22orf46C9J442 243 aa13.47□□□□□ -0.25
PTP4A1-201ENST00000370651 GAGE7O76087 117 aa13.47□□□□□ -0.25
PTP4A1-201ENST00000370651 LHBP01229 141 aa13.47□□□□□ -0.25
PTP4A1-201ENST00000370651 GAGE12FP0CL80 117 aa13.47□□□□□ -0.25
PTP4A1-201ENST00000370651 GAGE12GP0CL81 117 aa13.47□□□□□ -0.25
PTP4A1-201ENST00000370651 GAGE12IP0CL82 117 aa13.47□□□□□ -0.25
PTP4A1-201ENST00000370651 RBAKDNA6NC62 111 aa13.47□□□□□ -0.25
PTP4A1-201ENST00000370651 IGKV1-17P01599 117 aa13.47□□□□□ -0.25
PTP4A1-201ENST00000370651 COL4A3Q01955 1670 aa13.46□□□□□ -0.25
PTP4A1-201ENST00000370651 FOXI2Q6ZQN5 318 aa13.46□□□□□ -0.25
PTP4A1-201ENST00000370651 C15orf53Q8NAA6 179 aa13.46□□□□□ -0.25
PTP4A1-201ENST00000370651 TANC1Q9C0D5 1861 aa13.46□□□□□ -0.25
PTP4A1-201ENST00000370651 IGHV3-38A0A0C4DH36 116 aa13.46□□□□□ -0.25
PTP4A1-201ENST00000370651 PFN2P35080 140 aa13.46□□□□□ -0.25
PTP4A1-201ENST00000370651 FRMPD3Q5JV73 1810 aa13.46□□□□□ -0.25
PTP4A1-201ENST00000370651 LENEPQ9Y5L5 61 aa13.46□□□□□ -0.25
PTP4A1-201ENST00000370651 SRSF2Q01130 221 aaKnown RBP13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 ARHGAP21Q5T5U3 1957 aa13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 DENND4AQ7Z401 1863 aa13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 ZNRF2Q8NHG8 242 aa13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 SPRNQ5BIV9 151 aa13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 MRPL53Q96EL3 112 aaKnown RBP13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 MSRB1Q9NZV6 116 aa13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 INS-IGF2F8WCM5 200 aa13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 DEFB130BP0DP73 79 aa13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 DEFB130AP0DP74 79 aa13.45□□□□□ -0.26
PTP4A1-201ENST00000370651 IGKV1OR2-108A0A075B7D4 117 aa13.44□□□□□ -0.26
PTP4A1-201ENST00000370651 I3L2K1 104 aa13.44□□□□□ -0.26
PTP4A1-201ENST00000370651 MSMBP08118 114 aa13.44□□□□□ -0.26
PTP4A1-201ENST00000370651 GNLYP22749 145 aa13.44□□□□□ -0.26
PTP4A1-201ENST00000370651 FXYD2P54710 66 aa13.44□□□□□ -0.26
PTP4A1-201ENST00000370651 NCOA6Q14686 2063 aaPredicted RBP13.44□□□□□ -0.26
PTP4A1-201ENST00000370651 GNRH2O43555 120 aa13.44□□□□□ -0.26
PTP4A1-201ENST00000370651 IGHV7-4-1A0A0J9YVY3 117 aa13.44□□□□□ -0.26
PTP4A1-201ENST00000370651 KIAA1671Q9BY89 1806 aa13.43□□□□□ -0.26
PTP4A1-201ENST00000370651 K7EIM0 57 aa13.43□□□□□ -0.26
PTP4A1-201ENST00000370651 RHOHQ15669 191 aa13.43□□□□□ -0.26
PTP4A1-201ENST00000370651 ANKRD29Q8N6D5 301 aa13.43□□□□□ -0.26
PTP4A1-201ENST00000370651 LINC01356Q8N9X3 169 aa13.42□□□□□ -0.26
PTP4A1-201ENST00000370651 HIGD1BQ9P298 99 aa13.42□□□□□ -0.26
PTP4A1-201ENST00000370651 F6UB75 175 aa13.42□□□□□ -0.26
PTP4A1-201ENST00000370651 TTTY13Q9BZ97 58 aa13.42□□□□□ -0.26
PTP4A1-201ENST00000370651 UBL5Q9BZL1 73 aa13.42□□□□□ -0.26
PTP4A1-201ENST00000370651 B5MCH6 92 aa13.42□□□□□ -0.26
PTP4A1-201ENST00000370651 GAGE6Q13070 117 aa13.42□□□□□ -0.26
PTP4A1-201ENST00000370651 TMEM243Q9BU79 118 aa13.42□□□□□ -0.26
PTP4A1-201ENST00000370651 DYSFO75923 2080 aa13.41□□□□□ -0.26
PTP4A1-201ENST00000370651 WFDC2Q14508 124 aa13.41□□□□□ -0.26
PTP4A1-201ENST00000370651 RNASE13Q5GAN3 156 aaKnown RBP13.41□□□□□ -0.26
PTP4A1-201ENST00000370651 TCTEX1D4Q5JR98 221 aa13.41□□□□□ -0.26
PTP4A1-201ENST00000370651 ZGRF1Q86YA3 2104 aa13.41□□□□□ -0.26
PTP4A1-201ENST00000370651 IGHG4P01861 327 aa13.41□□□□□ -0.26
PTP4A1-201ENST00000370651 HERVK_113P63121 156 aa13.41□□□□□ -0.26
PTP4A1-201ENST00000370651 TRAV13-2A0A0B4J235 113 aa13.4□□□□□ -0.26
PTP4A1-201ENST00000370651 SPRY2O43597 315 aa13.4□□□□□ -0.26
PTP4A1-201ENST00000370651 GATA3P23771 443 aa13.4□□□□□ -0.26
PTP4A1-201ENST00000370651 ODF3L1Q8IXM7 274 aa13.4□□□□□ -0.26
PTP4A1-201ENST00000370651 RPL39LQ96EH5 51 aaKnown RBP13.4□□□□□ -0.27
PTP4A1-201ENST00000370651 CFHR3Q02985 330 aa13.39□□□□□ -0.27
PTP4A1-201ENST00000370651 RITA1Q96K30 269 aa13.39□□□□□ -0.27
PTP4A1-201ENST00000370651 FREM1Q5H8C1 2179 aa13.39□□□□□ -0.27
PTP4A1-201ENST00000370651 PRSS33Q8NF86 280 aa13.39□□□□□ -0.27
PTP4A1-201ENST00000370651 C2orf70A6NJV1 201 aa13.39□□□□□ -0.27
PTP4A1-201ENST00000370651 LINC01619G3V211 115 aa13.38□□□□□ -0.27
PTP4A1-201ENST00000370651 IGLV11-55A0A075B6I3 123 aa13.37□□□□□ -0.27
PTP4A1-201ENST00000370651 TEN1Q86WV5 123 aa13.37□□□□□ -0.27
PTP4A1-201ENST00000370651 P0C879 139 aa13.37□□□□□ -0.27
PTP4A1-201ENST00000370651 CRYBA4P53673 196 aa13.37□□□□□ -0.27
PTP4A1-201ENST00000370651 NXPH4O95158 308 aa13.37□□□□□ -0.27
PTP4A1-201ENST00000370651 TRACP01848 142 aa13.37□□□□□ -0.27
PTP4A1-201ENST00000370651 HAMPP81172 84 aa13.37□□□□□ -0.27
PTP4A1-201ENST00000370651 NUP210Q8TEM1 1887 aaPredicted RBP13.36□□□□□ -0.27
PTP4A1-201ENST00000370651 K7ENP7 123 aa13.36□□□□□ -0.27
PTP4A1-201ENST00000370651 MRPL36Q9P0J6 103 aaKnown RBP13.36□□□□□ -0.27
PTP4A1-201ENST00000370651 CTSGP08311 255 aa13.36□□□□□ -0.27
PTP4A1-201ENST00000370651 SS18L2Q9UHA2 77 aa13.36□□□□□ -0.27
PTP4A1-201ENST00000370651 A4D1N5 150 aa13.35□□□□□ -0.27
PTP4A1-201ENST00000370651 C19orf71A6NCJ1 209 aa13.35□□□□□ -0.27
PTP4A1-201ENST00000370651 CITED1Q99966 193 aa13.35□□□□□ -0.27
PTP4A1-201ENST00000370651 H3BUA1 57 aa13.35□□□□□ -0.27
PTP4A1-201ENST00000370651 Q6ZPA2 131 aa13.35□□□□□ -0.27
PTP4A1-201ENST00000370651 NPBQ8NG41 125 aa13.35□□□□□ -0.27
PTP4A1-201ENST00000370651 PLA2G5P39877 138 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 PLA2G2CQ5R387 149 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 ZNF295-AS1Q8N0V1 137 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 ZNF503Q96F45 646 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 PCNX2A6NKB5 2137 aa13.34□□□□□ -0.27
PTP4A1-201ENST00000370651 CR1LQ2VPA4 569 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms