RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 TRAV12-3A0A0B4J271 114 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 GRIFINA4D1Z8 144 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 FXYD7P58549 80 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 WFDC10AQ9H1F0 79 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 NAGKQ9UJ70 344 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 SORL1Q92673 2214 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 A0A1B0GXF2 115 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 CTRLP40313 264 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 ANXA2RQ3ZCQ2 193 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 RASL11AQ6T310 242 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 FER1L6-AS1Q8NA97 138 aa17.57■□□□□ 0.4
SNX3-203ENST00000368979 MDFIQ99750 246 aa17.56■□□□□ 0.4
SNX3-203ENST00000368979 TRGC2P03986 189 aa17.55■□□□□ 0.4
SNX3-203ENST00000368979 COX19Q49B96 90 aa17.55■□□□□ 0.4
SNX3-203ENST00000368979 MUC21Q5SSG8 566 aa17.55■□□□□ 0.4
SNX3-203ENST00000368979 LYZL1Q6UWQ5 148 aa17.55■□□□□ 0.4
SNX3-203ENST00000368979 VWFP04275 2813 aa17.55■□□□□ 0.4
SNX3-203ENST00000368979 C1orf196B1AJZ1 125 aa17.54■□□□□ 0.4
SNX3-203ENST00000368979 ARMS2P0C7Q2 107 aa17.54■□□□□ 0.4
SNX3-203ENST00000368979 TPPP3Q9BW30 176 aa17.54■□□□□ 0.4
SNX3-203ENST00000368979 GNB1LQ9BYB4 327 aa17.54■□□□□ 0.4
SNX3-203ENST00000368979 A0A1B0GUT8 65 aa17.53■□□□□ 0.4
SNX3-203ENST00000368979 PHOX2AO14813 284 aa17.53■□□□□ 0.4
SNX3-203ENST00000368979 RBMY1A1P0DJD3 496 aaKnown RBP17.53■□□□□ 0.4
SNX3-203ENST00000368979 RBMY1CP0DJD4 496 aa17.53■□□□□ 0.4
SNX3-203ENST00000368979 RBMY1FQ15415 496 aaKnown RBP17.53■□□□□ 0.4
SNX3-203ENST00000368979 TDRG1Q3Y452 100 aa17.53■□□□□ 0.4
SNX3-203ENST00000368979 WDR73Q6P4I2 378 aa17.53■□□□□ 0.4
SNX3-203ENST00000368979 TMEM136Q6ZRR5 245 aa17.53■□□□□ 0.4
SNX3-203ENST00000368979 GTSCR1Q86UQ5 136 aa17.53■□□□□ 0.4
SNX3-203ENST00000368979 AMBPP02760 352 aa17.52■□□□□ 0.4
SNX3-203ENST00000368979 HBBP68871 147 aa17.52■□□□□ 0.4
SNX3-203ENST00000368979 FAM159AQ6UWV7 190 aa17.52■□□□□ 0.4
SNX3-203ENST00000368979 SNURFLB1AK76 121 aa17.52■□□□□ 0.39
SNX3-203ENST00000368979 DNLZQ5SXM8 178 aa17.52■□□□□ 0.39
SNX3-203ENST00000368979 KCNS1Q96KK3 526 aa17.52■□□□□ 0.39
SNX3-203ENST00000368979 SSBP4Q9BWG4 385 aaPredicted RBP17.52■□□□□ 0.39
SNX3-203ENST00000368979 CNFNQ9BYD5 112 aa17.52■□□□□ 0.39
SNX3-203ENST00000368979 TRAPPC1Q9Y5R8 145 aa17.52■□□□□ 0.39
SNX3-203ENST00000368979 SNAI2O43623 268 aa17.51■□□□□ 0.39
SNX3-203ENST00000368979 RIGQ13278 110 aa17.51■□□□□ 0.39
SNX3-203ENST00000368979 BORCS7Q96B45 105 aa17.51■□□□□ 0.39
SNX3-203ENST00000368979 F2Z2F3 143 aa17.5■□□□□ 0.39
SNX3-203ENST00000368979 MT-ND6P03923 174 aa17.5■□□□□ 0.39
SNX3-203ENST00000368979 OR5AL1P0C617 328 aa17.5■□□□□ 0.39
SNX3-203ENST00000368979 ASIPP42127 132 aa17.5■□□□□ 0.39
SNX3-203ENST00000368979 DEFB125Q8N687 156 aa17.5■□□□□ 0.39
SNX3-203ENST00000368979 C20orf144Q9BQM9 153 aa17.5■□□□□ 0.39
SNX3-203ENST00000368979 IGHV1OR15-1A0A075B7D0 117 aa17.49■□□□□ 0.39
SNX3-203ENST00000368979 GNRH2O43555 120 aa17.49■□□□□ 0.39
SNX3-203ENST00000368979 HLA-DQA1P01909 254 aa17.49■□□□□ 0.39
SNX3-203ENST00000368979 MED14OSP0DP75 135 aa17.49■□□□□ 0.39
SNX3-203ENST00000368979 CAMPP49913 170 aa17.49■□□□□ 0.39
SNX3-203ENST00000368979 RAB5BP61020 215 aa17.49■□□□□ 0.39
SNX3-203ENST00000368979 NUTF2P61970 127 aaKnown RBP17.49■□□□□ 0.39
SNX3-203ENST00000368979 FABP9Q0Z7S8 132 aa17.49■□□□□ 0.39
SNX3-203ENST00000368979 PRR31Q5SQ13 230 aa17.49■□□□□ 0.39
SNX3-203ENST00000368979 A0A1B0GW15 77 aa17.48■□□□□ 0.39
SNX3-203ENST00000368979 INSP01308 110 aa17.48■□□□□ 0.39
SNX3-203ENST00000368979 ZFP82Q8N141 532 aa17.48■□□□□ 0.39
SNX3-203ENST00000368979 GATD1Q8NB37 220 aa17.48■□□□□ 0.39
SNX3-203ENST00000368979 MRPL18Q9H0U6 180 aaKnown RBP17.48■□□□□ 0.39
SNX3-203ENST00000368979 H3BVH4 76 aa17.47■□□□□ 0.39
SNX3-203ENST00000368979 RAB4BP61018 213 aa17.47■□□□□ 0.39
SNX3-203ENST00000368979 FRZBQ92765 325 aa17.47■□□□□ 0.39
SNX3-203ENST00000368979 MUC21A0A0G2JKD1 596 aa17.47■□□□□ 0.39
SNX3-203ENST00000368979 MUC21A0A140T8X8 626 aa17.47■□□□□ 0.39
SNX3-203ENST00000368979 RNASE3P12724 160 aaKnown RBP17.47■□□□□ 0.39
SNX3-203ENST00000368979 XCL2Q9UBD3 114 aa17.47■□□□□ 0.39
SNX3-203ENST00000368979 S100A4P26447 101 aaKnown RBP17.46■□□□□ 0.39
SNX3-203ENST00000368979 Q8N1Y9 231 aa17.46■□□□□ 0.39
SNX3-203ENST00000368979 SCRT2Q9NQ03 307 aa17.46■□□□□ 0.39
SNX3-203ENST00000368979 TP53TG3Q9ULZ0 132 aa17.46■□□□□ 0.39
SNX3-203ENST00000368979 S100A8P05109 93 aa17.45■□□□□ 0.38
SNX3-203ENST00000368979 GIG44P09565 113 aaPredicted RBP17.45■□□□□ 0.38
SNX3-203ENST00000368979 RPL35AP18077 110 aaKnown RBP17.45■□□□□ 0.38
SNX3-203ENST00000368979 MORN3Q6PF18 240 aaPredicted RBP17.45■□□□□ 0.38
SNX3-203ENST00000368979 OR10AG1Q8NH19 301 aa17.45■□□□□ 0.38
SNX3-203ENST00000368979 IGHV4-4A0A075B6R2 117 aa17.44■□□□□ 0.38
SNX3-203ENST00000368979 TRGC1P0CF51 173 aa17.44■□□□□ 0.38
SNX3-203ENST00000368979 NTF3P20783 257 aa17.44■□□□□ 0.38
SNX3-203ENST00000368979 OXLD1Q5BKU9 147 aa17.44■□□□□ 0.38
SNX3-203ENST00000368979 LINC00467Q9BRT7 94 aa17.44■□□□□ 0.38
SNX3-203ENST00000368979 IGHV3-16A0A0C4DH30 117 aa17.43■□□□□ 0.38
SNX3-203ENST00000368979 CACNG7P62955 275 aa17.43■□□□□ 0.38
SNX3-203ENST00000368979 ZNF493Q6ZR52 646 aa17.43■□□□□ 0.38
SNX3-203ENST00000368979 COL6A5A8TX70 2615 aa17.43■□□□□ 0.38
SNX3-203ENST00000368979 STAB1Q9NY15 2570 aa17.43■□□□□ 0.38
SNX3-203ENST00000368979 HIST1H2BKO60814 126 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 HIST1H2BJP06899 126 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 HIST1H2BOP23527 126 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 HIST1H2BBP33778 126 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 HIST1H2BDP58876 126 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 HIST1H2BCP62807 126 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 SLAQ13239 276 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 TWIST1Q15672 202 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 HIST2H2BEQ16778 126 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.42■□□□□ 0.38
SNX3-203ENST00000368979 C1orf158Q8N1D5 194 aa17.42■□□□□ 0.38
SNX3-203ENST00000368979 HIST1H2BHQ93079 126 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms