RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ESRGQ1W209 222 aa13.12□□□□□ -0.31
CKS1B-203ENST00000368439 IQCF2Q8IXL9 164 aa13.12□□□□□ -0.31
CKS1B-203ENST00000368439 C11orf21Q9P2W6 132 aa13.12□□□□□ -0.31
CKS1B-203ENST00000368439 FAM74A7A6NL05 159 aa13.11□□□□□ -0.31
CKS1B-203ENST00000368439 K7EQM0 130 aa13.11□□□□□ -0.31
CKS1B-203ENST00000368439 UBE2G2P60604 165 aa13.11□□□□□ -0.31
CKS1B-203ENST00000368439 LINC00479Q96M42 142 aa13.11□□□□□ -0.31
CKS1B-203ENST00000368439 NDFIP1Q9BT67 221 aa13.11□□□□□ -0.31
CKS1B-203ENST00000368439 HERC2O95714 4834 aa13.1□□□□□ -0.31
CKS1B-203ENST00000368439 NBDYA0A0U1RRE5 68 aa13.1□□□□□ -0.31
CKS1B-203ENST00000368439 MAP1LC3B2A6NCE7 125 aa13.1□□□□□ -0.31
CKS1B-203ENST00000368439 FHITP49789 147 aa13.1□□□□□ -0.31
CKS1B-203ENST00000368439 PRNTQ86SH4 94 aa13.1□□□□□ -0.31
CKS1B-203ENST00000368439 MAP1LC3BQ9GZQ8 125 aa13.1□□□□□ -0.31
CKS1B-203ENST00000368439 A0A0D9SG52 128 aa13.09□□□□□ -0.31
CKS1B-203ENST00000368439 FBLL1A6NHQ2 334 aaKnown RBP13.09□□□□□ -0.31
CKS1B-203ENST00000368439 GCGP01275 180 aa13.09□□□□□ -0.31
CKS1B-203ENST00000368439 CRYBA4P53673 196 aa13.09□□□□□ -0.31
CKS1B-203ENST00000368439 ZNF479Q96JC4 524 aa13.09□□□□□ -0.31
CKS1B-203ENST00000368439 KCNS1Q96KK3 526 aa13.09□□□□□ -0.31
CKS1B-203ENST00000368439 UPK3BQ9BT76 320 aa13.09□□□□□ -0.31
CKS1B-203ENST00000368439 TRAV34A0A0B4J273 112 aa13.08□□□□□ -0.32
CKS1B-203ENST00000368439 PRSS29PA6NIE9 313 aa13.08□□□□□ -0.32
CKS1B-203ENST00000368439 BCL2L11O43521 198 aa13.08□□□□□ -0.32
CKS1B-203ENST00000368439 PFN1P07737 140 aaKnown RBP13.08□□□□□ -0.32
CKS1B-203ENST00000368439 SEC11BP0C7V7 166 aa13.08□□□□□ -0.32
CKS1B-203ENST00000368439 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
CKS1B-203ENST00000368439 NKX6-2Q9C056 277 aaPredicted RBP13.08□□□□□ -0.32
CKS1B-203ENST00000368439 SDF2L1Q9HCN8 221 aa13.08□□□□□ -0.32
CKS1B-203ENST00000368439 PRO0255Q9UI72 69 aa13.08□□□□□ -0.32
CKS1B-203ENST00000368439 M0R2P5 195 aa13.07□□□□□ -0.32
CKS1B-203ENST00000368439 PEX7O00628 323 aa13.07□□□□□ -0.32
CKS1B-203ENST00000368439 PAX4O43316 350 aa13.07□□□□□ -0.32
CKS1B-203ENST00000368439 SFTA3P0C7M3 94 aa13.07□□□□□ -0.32
CKS1B-203ENST00000368439 Q9H8V8 135 aa13.07□□□□□ -0.32
CKS1B-203ENST00000368439 HHLA3Q9XRX5 114 aa13.07□□□□□ -0.32
CKS1B-203ENST00000368439 MRPS16Q9Y3D3 137 aaKnown RBP13.07□□□□□ -0.32
CKS1B-203ENST00000368439 KIAA1109Q2LD37 5005 aa13.07□□□□□ -0.32
CKS1B-203ENST00000368439 IFNA7P01567 189 aa13.06□□□□□ -0.32
CKS1B-203ENST00000368439 SLAQ13239 276 aa13.06□□□□□ -0.32
CKS1B-203ENST00000368439 SAPCD1Q5SSQ6 148 aa13.06□□□□□ -0.32
CKS1B-203ENST00000368439 C1orf134Q5TEV5 83 aa13.06□□□□□ -0.32
CKS1B-203ENST00000368439 MBD3L1Q8WWY6 194 aa13.06□□□□□ -0.32
CKS1B-203ENST00000368439 HIST1H2BAQ96A08 127 aa13.06□□□□□ -0.32
CKS1B-203ENST00000368439 ZNF471Q9BX82 626 aaPredicted RBP13.06□□□□□ -0.32
CKS1B-203ENST00000368439 ARL2-SNX15V9GYD0 113 aa13.06□□□□□ -0.32
CKS1B-203ENST00000368439 KANTRA0A1W2PQU2 76 aa13.05□□□□□ -0.32
CKS1B-203ENST00000368439 Q86TA4 180 aa13.05□□□□□ -0.32
CKS1B-203ENST00000368439 ICOSQ9Y6W8 199 aa13.05□□□□□ -0.32
CKS1B-203ENST00000368439 TRAV4A0A0B4J268 109 aa13.04□□□□□ -0.32
CKS1B-203ENST00000368439 UMAD1C9J7I0 102 aa13.04□□□□□ -0.32
CKS1B-203ENST00000368439 ZFP69Q49AA0 526 aa13.04□□□□□ -0.32
CKS1B-203ENST00000368439 TMUB2Q71RG4 321 aa13.04□□□□□ -0.32
CKS1B-203ENST00000368439 C9orf85Q96MD7 179 aa13.04□□□□□ -0.32
CKS1B-203ENST00000368439 KRTAP1-5Q9BYS1 174 aa13.04□□□□□ -0.32
CKS1B-203ENST00000368439 TRGV4A0A0C4DH28 118 aa13.03□□□□□ -0.32
CKS1B-203ENST00000368439 PPT1P50897 306 aa13.03□□□□□ -0.32
CKS1B-203ENST00000368439 SOHLH1Q5JUK2 328 aa13.03□□□□□ -0.32
CKS1B-203ENST00000368439 COX8CQ7Z4L0 72 aa13.03□□□□□ -0.32
CKS1B-203ENST00000368439 STOML3Q8TAV4 291 aa13.03□□□□□ -0.32
CKS1B-203ENST00000368439 IGKV3D-20A0A0C4DH25 116 aa13.02□□□□□ -0.33
CKS1B-203ENST00000368439 RNASE3P12724 160 aaKnown RBP13.02□□□□□ -0.33
CKS1B-203ENST00000368439 Q6ZNX1 250 aa13.02□□□□□ -0.33
CKS1B-203ENST00000368439 OR4C5Q8NGB2 326 aa13.02□□□□□ -0.33
CKS1B-203ENST00000368439 FAM213BQ8TBF2 198 aa13.02□□□□□ -0.33
CKS1B-203ENST00000368439 TRBV6-1A0A0K0K1D8 114 aa13.01□□□□□ -0.33
CKS1B-203ENST00000368439 CRIP1P50238 77 aa13.01□□□□□ -0.33
CKS1B-203ENST00000368439 DPPA3Q6W0C5 159 aa13.01□□□□□ -0.33
CKS1B-203ENST00000368439 C6orf223Q8N319 242 aa13.01□□□□□ -0.33
CKS1B-203ENST00000368439 SFT2D1Q8WV19 159 aa13.01□□□□□ -0.33
CKS1B-203ENST00000368439 PTH2Q96A98 100 aa13.01□□□□□ -0.33
CKS1B-203ENST00000368439 TCEAL7Q9BRU2 100 aa13.01□□□□□ -0.33
CKS1B-203ENST00000368439 FABP5P3A8MUU1 101 aa13□□□□□ -0.33
CKS1B-203ENST00000368439 K7EQD1 137 aa13□□□□□ -0.33
CKS1B-203ENST00000368439 PAGE4O60829 102 aa13□□□□□ -0.33
CKS1B-203ENST00000368439 MRPL23Q16540 153 aaKnown RBP13□□□□□ -0.33
CKS1B-203ENST00000368439 LGALSLQ3ZCW2 172 aaPredicted RBP13□□□□□ -0.33
CKS1B-203ENST00000368439 CST9LP1Q5W188 147 aa13□□□□□ -0.33
CKS1B-203ENST00000368439 LYPD5Q6UWN5 251 aa13□□□□□ -0.33
CKS1B-203ENST00000368439 TCTE3Q8IZS6 198 aa13□□□□□ -0.33
CKS1B-203ENST00000368439 ZC2HC1AQ96GY0 325 aa13□□□□□ -0.33
CKS1B-203ENST00000368439 FMC1Q96HJ9 113 aa13□□□□□ -0.33
CKS1B-203ENST00000368439 PGPEP1LA6NFU8 196 aa12.99□□□□□ -0.33
CKS1B-203ENST00000368439 C9JCJ5 164 aa12.99□□□□□ -0.33
CKS1B-203ENST00000368439 RS1O15537 224 aa12.99□□□□□ -0.33
CKS1B-203ENST00000368439 PFDN1O60925 122 aa12.99□□□□□ -0.33
CKS1B-203ENST00000368439 TPT1P13693 172 aaKnown RBP12.99□□□□□ -0.33
CKS1B-203ENST00000368439 EIF5AP63241 154 aaKnown RBP12.99□□□□□ -0.33
CKS1B-203ENST00000368439 ZNF876PQ49A33 203 aa12.99□□□□□ -0.33
CKS1B-203ENST00000368439 ZFP30Q9Y2G7 519 aa12.99□□□□□ -0.33
CKS1B-203ENST00000368439 A0A1B0GV50 99 aa12.98□□□□□ -0.33
CKS1B-203ENST00000368439 A0A1W2PPQ1 181 aa12.98□□□□□ -0.33
CKS1B-203ENST00000368439 LTAP01374 205 aa12.98□□□□□ -0.33
CKS1B-203ENST00000368439 GYPEP15421 78 aa12.98□□□□□ -0.33
CKS1B-203ENST00000368439 GATA1P15976 413 aaPredicted RBP12.98□□□□□ -0.33
CKS1B-203ENST00000368439 TNP2Q05952 138 aa12.98□□□□□ -0.33
CKS1B-203ENST00000368439 CFAP126Q5VTH2 177 aa12.98□□□□□ -0.33
CKS1B-203ENST00000368439 NEGR1Q7Z3B1 354 aa12.98□□□□□ -0.33
CKS1B-203ENST00000368439 ZNF575Q86XF7 245 aa12.98□□□□□ -0.33
CKS1B-203ENST00000368439 ORM1P02763 201 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms