RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 MIXL1Q9H2W2 232 aa9.25□□□□□ -0.93
VAMP4-202ENST00000367740 URGCP-MRPS24S4R325 110 aa9.25□□□□□ -0.93
VAMP4-202ENST00000367740 SEC11BP0C7V7 166 aa9.24□□□□□ -0.93
VAMP4-202ENST00000367740 MIC13Q5XKP0 118 aa9.24□□□□□ -0.93
VAMP4-202ENST00000367740 Q6ZRG5 221 aa9.24□□□□□ -0.93
VAMP4-202ENST00000367740 OR1L4Q8NGR5 311 aa9.24□□□□□ -0.93
VAMP4-202ENST00000367740 MCUBQ9NWR8 336 aa9.24□□□□□ -0.93
VAMP4-202ENST00000367740 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 CIDEAO60543 219 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 TYMSP04818 313 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 MGST1P10620 155 aaKnown RBP9.23□□□□□ -0.93
VAMP4-202ENST00000367740 CAMLGP49069 296 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 GAGE1Q13065 139 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 GAGE4Q13068 117 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 GAGE5Q13069 117 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 GAGE13Q4V321 117 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 CYB561D1Q8N8Q1 229 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 AP3S1Q92572 193 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 PFDN5Q99471 154 aa9.23□□□□□ -0.93
VAMP4-202ENST00000367740 A0A087WWC5 75 aa9.22□□□□□ -0.93
VAMP4-202ENST00000367740 A0A087WYN8 130 aa9.22□□□□□ -0.93
VAMP4-202ENST00000367740 INPP1P49441 399 aa9.22□□□□□ -0.93
VAMP4-202ENST00000367740 CAV2P51636 162 aa9.22□□□□□ -0.93
VAMP4-202ENST00000367740 RPL19P84098 196 aaKnown RBP9.22□□□□□ -0.93
VAMP4-202ENST00000367740 ZNF876PQ49A33 203 aa9.22□□□□□ -0.93
VAMP4-202ENST00000367740 NRARPQ7Z6K4 114 aa9.22□□□□□ -0.93
VAMP4-202ENST00000367740 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
VAMP4-202ENST00000367740 PRR3P79522 188 aaKnown RBP9.21□□□□□ -0.94
VAMP4-202ENST00000367740 C12orf45Q8N5I9 185 aaPredicted RBP9.21□□□□□ -0.94
VAMP4-202ENST00000367740 OR10G9Q8NGN4 311 aa9.21□□□□□ -0.94
VAMP4-202ENST00000367740 GGACTQ9BVM4 153 aa9.21□□□□□ -0.94
VAMP4-202ENST00000367740 KRTAP4-9Q9BYQ8 210 aa9.21□□□□□ -0.94
VAMP4-202ENST00000367740 Q9UF83 564 aa9.21□□□□□ -0.94
VAMP4-202ENST00000367740 CTDSPLO15194 276 aa9.2□□□□□ -0.94
VAMP4-202ENST00000367740 SFT2D2O95562 160 aa9.2□□□□□ -0.94
VAMP4-202ENST00000367740 HLA-DQA1P01909 254 aa9.2□□□□□ -0.94
VAMP4-202ENST00000367740 CHTF8P0CG12 524 aa9.2□□□□□ -0.94
VAMP4-202ENST00000367740 Q0VG73 95 aa9.2□□□□□ -0.94
VAMP4-202ENST00000367740 PPP1R1AQ13522 171 aa9.2□□□□□ -0.94
VAMP4-202ENST00000367740 RNF185Q96GF1 192 aa9.2□□□□□ -0.94
VAMP4-202ENST00000367740 FUNDC2Q9BWH2 189 aa9.2□□□□□ -0.94
VAMP4-202ENST00000367740 GPN1Q9HCN4 374 aaPredicted RBP9.2□□□□□ -0.94
VAMP4-202ENST00000367740 RBAKDNA6NC62 111 aa9.19□□□□□ -0.94
VAMP4-202ENST00000367740 TSC22D2O75157 780 aa9.19□□□□□ -0.94
VAMP4-202ENST00000367740 ENHOQ6UWT2 76 aa9.19□□□□□ -0.94
VAMP4-202ENST00000367740 SPACA4Q8TDM5 124 aa9.19□□□□□ -0.94
VAMP4-202ENST00000367740 C7orf33Q8WU49 177 aa9.19□□□□□ -0.94
VAMP4-202ENST00000367740 ATP5SQ99766 215 aa9.19□□□□□ -0.94
VAMP4-202ENST00000367740 CHCHD7Q9BUK0 85 aa9.19□□□□□ -0.94
VAMP4-202ENST00000367740 Q9H521 79 aa9.19□□□□□ -0.94
VAMP4-202ENST00000367740 A0A087WX48 190 aa9.18□□□□□ -0.94
VAMP4-202ENST00000367740 ELOBQ15370 118 aa9.18□□□□□ -0.94
VAMP4-202ENST00000367740 REG3GQ6UW15 175 aa9.18□□□□□ -0.94
VAMP4-202ENST00000367740 SLC25A2Q9BXI2 301 aa9.18□□□□□ -0.94
VAMP4-202ENST00000367740 SDF2L1Q9HCN8 221 aa9.18□□□□□ -0.94
VAMP4-202ENST00000367740 SLC39A9Q9NUM3 307 aa9.18□□□□□ -0.94
VAMP4-202ENST00000367740 PLAC8Q9NZF1 115 aa9.18□□□□□ -0.94
VAMP4-202ENST00000367740 LENEPQ9Y5L5 61 aa9.18□□□□□ -0.94
VAMP4-202ENST00000367740 FSIP2Q5CZC0 6907 aa9.17□□□□□ -0.94
VAMP4-202ENST00000367740 DIRC3C9JPN6 131 aa9.17□□□□□ -0.94
VAMP4-202ENST00000367740 TAS2R30P59541 319 aa9.17□□□□□ -0.94
VAMP4-202ENST00000367740 IL18Q14116 193 aa9.17□□□□□ -0.94
VAMP4-202ENST00000367740 PHYHIPLQ96FC7 376 aa9.17□□□□□ -0.94
VAMP4-202ENST00000367740 SAMD10Q9BYL1 202 aa9.17□□□□□ -0.94
VAMP4-202ENST00000367740 RGS5O15539 181 aa9.16□□□□□ -0.94
VAMP4-202ENST00000367740 NBEAP1P0C6P0 100 aa9.16□□□□□ -0.94
VAMP4-202ENST00000367740 RPL29P47914 159 aaKnown RBP9.16□□□□□ -0.94
VAMP4-202ENST00000367740 ZNF506Q5JVG8 444 aa9.16□□□□□ -0.94
VAMP4-202ENST00000367740 DYNC2LI1Q8TCX1 351 aa9.16□□□□□ -0.94
VAMP4-202ENST00000367740 DPH3Q96FX2 82 aa9.16□□□□□ -0.94
VAMP4-202ENST00000367740 FAM167A-AS1Q96KT0 104 aa9.16□□□□□ -0.94
VAMP4-202ENST00000367740 WDR83OSQ9Y284 106 aa9.16□□□□□ -0.94
VAMP4-202ENST00000367740 TRAV21A0A0B4J279 112 aa9.15□□□□□ -0.94
VAMP4-202ENST00000367740 PGPEP1LA6NFU8 196 aa9.15□□□□□ -0.94
VAMP4-202ENST00000367740 CTDSP2O14595 271 aa9.15□□□□□ -0.94
VAMP4-202ENST00000367740 SCGB1D2O95969 90 aa9.15□□□□□ -0.94
VAMP4-202ENST00000367740 SPINK6Q6UWN8 80 aa9.15□□□□□ -0.94
VAMP4-202ENST00000367740 ASB13Q8WXK3 278 aa9.15□□□□□ -0.94
VAMP4-202ENST00000367740 PGPA6NDG6 321 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 F6UZH7 168 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 CRPP02741 224 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 CNBPP62633 177 aaKnown RBP9.14□□□□□ -0.95
VAMP4-202ENST00000367740 GCSAMLQ5JQS6 135 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 KCNS1Q96KK3 526 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 LINC00479Q96M42 142 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 C9orf85Q96MD7 179 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 KRTAP4-2Q9BYR5 136 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 C20orf85Q9H1P6 137 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 PARLQ9H300 379 aa9.14□□□□□ -0.95
VAMP4-202ENST00000367740 C7orf66A4D0T2 115 aa9.13□□□□□ -0.95
VAMP4-202ENST00000367740 CSN1S1P47710 185 aa9.13□□□□□ -0.95
VAMP4-202ENST00000367740 C14orf178Q8N769 122 aaPredicted RBP9.13□□□□□ -0.95
VAMP4-202ENST00000367740 OR2T35Q8NGX2 323 aa9.13□□□□□ -0.95
VAMP4-202ENST00000367740 FXYD5Q96DB9 178 aa9.13□□□□□ -0.95
VAMP4-202ENST00000367740 VCX3AQ9NNX9 186 aa9.13□□□□□ -0.95
VAMP4-202ENST00000367740 IGHV3-64A0A075B6Q5 118 aa9.12□□□□□ -0.95
VAMP4-202ENST00000367740 FGF8P55075 233 aaPredicted RBP9.12□□□□□ -0.95
VAMP4-202ENST00000367740 KCNIP4Q6PIL6 250 aa9.12□□□□□ -0.95
VAMP4-202ENST00000367740 ZFP2Q6ZN57 461 aa9.12□□□□□ -0.95
VAMP4-202ENST00000367740 MIR17HGQ75NE6 70 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms