RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 IGHV7-81A0A0B4J1V7 117 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 E9PLD3 99 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 G3V318 75 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 CEACAM3P40198 252 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 SPANXN1Q5VSR9 72 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 CLEC19AQ6UXS0 136 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 OR11H6Q8NGC7 330 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 LINC01548A6NM66 108 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 ATP5LO75964 103 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 LAGE3Q14657 143 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 CYSLTR1Q9Y271 337 aa10.43□□□□□ -0.74
PRKN-205ENST00000366897 LRRK2Q5S007 2527 aa10.42□□□□□ -0.74
PRKN-205ENST00000366897 IGHV7-4-1A0A0J9YVY3 117 aa10.42□□□□□ -0.74
PRKN-205ENST00000366897 BUB3O43684 328 aa10.42□□□□□ -0.74
PRKN-205ENST00000366897 FOXI2Q6ZQN5 318 aa10.42□□□□□ -0.74
PRKN-205ENST00000366897 VMO1Q7Z5L0 202 aa10.42□□□□□ -0.74
PRKN-205ENST00000366897 LY6G5BQ8NDX9 201 aa10.42□□□□□ -0.74
PRKN-205ENST00000366897 PIFOQ8TCI5 191 aa10.42□□□□□ -0.74
PRKN-205ENST00000366897 ATP5G2Q06055 141 aa10.42□□□□□ -0.74
PRKN-205ENST00000366897 SPAG8Q99932 426 aaPredicted RBP10.42□□□□□ -0.74
PRKN-205ENST00000366897 GAGE12HA6NDE8 117 aa10.41□□□□□ -0.74
PRKN-205ENST00000366897 PRR9Q5T870 116 aa10.41□□□□□ -0.74
PRKN-205ENST00000366897 USP9XQ93008 2570 aaPredicted RBP10.41□□□□□ -0.74
PRKN-205ENST00000366897 LINC01546A6NGU7 62 aa10.41□□□□□ -0.74
PRKN-205ENST00000366897 M0R381 172 aa10.41□□□□□ -0.74
PRKN-205ENST00000366897 SIGMAR1Q99720 223 aa10.41□□□□□ -0.74
PRKN-205ENST00000366897 A0A087WX48 190 aa10.4□□□□□ -0.74
PRKN-205ENST00000366897 WFDC12Q8WWY7 111 aa10.4□□□□□ -0.74
PRKN-205ENST00000366897 ZNF48Q96MX3 618 aaPredicted RBP10.4□□□□□ -0.74
PRKN-205ENST00000366897 ZFAND3Q9H8U3 227 aa10.4□□□□□ -0.74
PRKN-205ENST00000366897 LINC00527Q9UJ94 153 aa10.4□□□□□ -0.74
PRKN-205ENST00000366897 TRAV8-2A0A0B4J237 113 aa10.4□□□□□ -0.74
PRKN-205ENST00000366897 CLPSL1A2RUU4 121 aa10.4□□□□□ -0.74
PRKN-205ENST00000366897 ODF3BA8MYP8 253 aa10.4□□□□□ -0.74
PRKN-205ENST00000366897 CDSNQ15517 529 aa10.4□□□□□ -0.74
PRKN-205ENST00000366897 TMEM78Q5T7P6 136 aa10.4□□□□□ -0.74
PRKN-205ENST00000366897 RPL39LQ96EH5 51 aaKnown RBP10.4□□□□□ -0.74
PRKN-205ENST00000366897 ATP6V0E1O15342 81 aa10.4□□□□□ -0.75
PRKN-205ENST00000366897 GNLYP22749 145 aa10.4□□□□□ -0.75
PRKN-205ENST00000366897 PRTN3P24158 256 aa10.39□□□□□ -0.75
PRKN-205ENST00000366897 EMP1P54849 157 aa10.39□□□□□ -0.75
PRKN-205ENST00000366897 TMEM190Q8WZ59 177 aa10.39□□□□□ -0.75
PRKN-205ENST00000366897 HIF1ANQ9NWT6 349 aa10.39□□□□□ -0.75
PRKN-205ENST00000366897 Q8N9W7 124 aa10.39□□□□□ -0.75
PRKN-205ENST00000366897 SMPXQ9UHP9 88 aa10.39□□□□□ -0.75
PRKN-205ENST00000366897 VPS13CQ709C8 3753 aa10.38□□□□□ -0.75
PRKN-205ENST00000366897 SETXQ7Z333 2677 aaKnown RBP10.38□□□□□ -0.75
PRKN-205ENST00000366897 CD300EQ496F6 205 aaPredicted RBP10.38□□□□□ -0.75
PRKN-205ENST00000366897 C8orf86Q6ZUL3 223 aa10.38□□□□□ -0.75
PRKN-205ENST00000366897 ZNF502Q8TBZ5 544 aa10.38□□□□□ -0.75
PRKN-205ENST00000366897 CCDC140Q96MF4 163 aa10.38□□□□□ -0.75
PRKN-205ENST00000366897 HIVEP3Q5T1R4 2406 aa10.38□□□□□ -0.75
PRKN-205ENST00000366897 HECTD1Q9ULT8 2610 aa10.38□□□□□ -0.75
PRKN-205ENST00000366897 UTP20O75691 2785 aaKnown RBP10.38□□□□□ -0.75
PRKN-205ENST00000366897 IGKV3-7A0A075B6H7 116 aa10.38□□□□□ -0.75
PRKN-205ENST00000366897 ZFP36P26651 326 aaKnown RBP10.38□□□□□ -0.75
PRKN-205ENST00000366897 GAGE13Q4V321 117 aa10.38□□□□□ -0.75
PRKN-205ENST00000366897 A0A1B0GWB2 263 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 OR11H12B2RN74 326 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 SRSF1Q07955 248 aaKnown RBP eCLIP10.37□□□□□ -0.75
PRKN-205ENST00000366897 RRN3P1Q2M238 152 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 C14orf178Q8N769 122 aaPredicted RBP10.37□□□□□ -0.75
PRKN-205ENST00000366897 OR11H1Q8NG94 326 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 OR11H2Q8NH07 326 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 SCGB3A1Q96QR1 104 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 VKORC1Q9BQB6 163 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 TRBV7-3A0A075B6L6 115 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 CCDC144NLQ6NUI1 221 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 Q8N6K4 173 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 C20orf78Q9BR46 151 aa10.37□□□□□ -0.75
PRKN-205ENST00000366897 CHTOPQ9Y3Y2 248 aaKnown RBP10.37□□□□□ -0.75
PRKN-205ENST00000366897 DOPEY2Q9Y3R5 2298 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 F8W1H4 67 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 MGPP08493 103 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 SCGB2A2Q13296 93 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 KLHL30-AS1Q8NEE0 82 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 SMIM2Q9BVW6 85 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 PGPEP1Q9NXJ5 209 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 F8VRH5 84 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 TGFAP01135 160 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 HLA-DRB4P13762 266 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 SRSF2Q01130 221 aaKnown RBP10.36□□□□□ -0.75
PRKN-205ENST00000366897 GLMPQ8WWB7 406 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 TIMD4Q96H15 378 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 HLA-DRB4X5D2U9 266 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 CIDEAO60543 219 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 SCGB2A1O75556 95 aa10.36□□□□□ -0.75
PRKN-205ENST00000366897 MORN3Q6PF18 240 aaPredicted RBP10.36□□□□□ -0.75
PRKN-205ENST00000366897 PTPN13Q12923 2485 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 MYMXA0A1B0GTQ4 84 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 PRSS29PA6NIE9 313 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 H7C1H1 209 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 PLNP26678 52 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 Q5PR19 223 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 C20orf173Q96LM9 149 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 PRADC1Q9BSG0 188 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 PRO0461Q9UI25 63 aa10.35□□□□□ -0.75
PRKN-205ENST00000366897 USP9YO00507 2555 aaPredicted RBP10.35□□□□□ -0.75
PRKN-205ENST00000366897 LGALS1P09382 135 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms