RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 ZNF48Q96MX3 618 aaPredicted RBP15.23■□□□□ 0.03
TRIM58-201ENST00000366481 FABP5P3A8MUU1 101 aa15.22■□□□□ 0.03
TRIM58-201ENST00000366481 ITPR1Q14643 2758 aa15.22■□□□□ 0.03
TRIM58-201ENST00000366481 CREBBPQ92793 2442 aa15.22■□□□□ 0.03
TRIM58-201ENST00000366481 DYNAPQ8N1N2 210 aa15.22■□□□□ 0.03
TRIM58-201ENST00000366481 HIF1ANQ9NWT6 349 aa15.22■□□□□ 0.03
TRIM58-201ENST00000366481 J3KRW8 73 aa15.22■□□□□ 0.03
TRIM58-201ENST00000366481 SCGB1C2P0DMR2 95 aa15.22■□□□□ 0.03
TRIM58-201ENST00000366481 ARL3P36405 182 aa15.22■□□□□ 0.03
TRIM58-201ENST00000366481 LAGE3Q14657 143 aa15.22■□□□□ 0.03
TRIM58-201ENST00000366481 NBR2O15453 112 aa15.21■□□□□ 0.03
TRIM58-201ENST00000366481 DLX4Q92988 240 aaPredicted RBP15.21■□□□□ 0.03
TRIM58-201ENST00000366481 IGHV3-49A0A0A0MS15 119 aa15.21■□□□□ 0.02
TRIM58-201ENST00000366481 RPL7P18124 248 aaKnown RBP15.21■□□□□ 0.02
TRIM58-201ENST00000366481 SPANXN1Q5VSR9 72 aa15.21■□□□□ 0.02
TRIM58-201ENST00000366481 ZMAT4Q9H898 229 aa15.21■□□□□ 0.02
TRIM58-201ENST00000366481 SS18L2Q9UHA2 77 aa15.21■□□□□ 0.02
TRIM58-201ENST00000366481 Q8N8P6 123 aa15.2■□□□□ 0.02
TRIM58-201ENST00000366481 SRSF8Q9BRL6 282 aaKnown RBP15.2■□□□□ 0.02
TRIM58-201ENST00000366481 ANAPC13Q9BS18 74 aa15.2■□□□□ 0.02
TRIM58-201ENST00000366481 DOPEY2Q9Y3R5 2298 aa15.2■□□□□ 0.02
TRIM58-201ENST00000366481 ABCA12Q86UK0 2595 aa15.2■□□□□ 0.02
TRIM58-201ENST00000366481 TRGV3P03979 118 aa15.2■□□□□ 0.02
TRIM58-201ENST00000366481 DEFB104AQ8WTQ1 72 aa15.2■□□□□ 0.02
TRIM58-201ENST00000366481 C1QTNF4Q9BXJ3 329 aa15.2■□□□□ 0.02
TRIM58-201ENST00000366481 DPM3Q9P2X0 92 aa15.2■□□□□ 0.02
TRIM58-201ENST00000366481 SRSF1Q07955 248 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRIM58-201ENST00000366481 K7ENP7 123 aa15.19■□□□□ 0.02
TRIM58-201ENST00000366481 HLA-DRB4P13762 266 aa15.19■□□□□ 0.02
TRIM58-201ENST00000366481 RNF183Q96D59 192 aa15.19■□□□□ 0.02
TRIM58-201ENST00000366481 HLA-DRB4X5D2U9 266 aa15.19■□□□□ 0.02
TRIM58-201ENST00000366481 CFAP46Q8IYW2 2715 aa15.19■□□□□ 0.02
TRIM58-201ENST00000366481 ZFP2Q6ZN57 461 aa15.19■□□□□ 0.02
TRIM58-201ENST00000366481 PIFOQ8TCI5 191 aa15.19■□□□□ 0.02
TRIM58-201ENST00000366481 SCGB3A1Q96QR1 104 aa15.19■□□□□ 0.02
TRIM58-201ENST00000366481 SETD2Q9BYW2 2564 aaPredicted RBP15.18■□□□□ 0.02
TRIM58-201ENST00000366481 MYMXA0A1B0GTQ4 84 aa15.18■□□□□ 0.02
TRIM58-201ENST00000366481 TAL2Q16559 108 aa15.18■□□□□ 0.02
TRIM58-201ENST00000366481 ZNF815PA8K554 130 aa15.18■□□□□ 0.02
TRIM58-201ENST00000366481 MFAP4P55083 255 aa15.18■□□□□ 0.02
TRIM58-201ENST00000366481 A0A087WX48 190 aa15.17■□□□□ 0.02
TRIM58-201ENST00000366481 IGLC6P0CF74 106 aa15.17■□□□□ 0.02
TRIM58-201ENST00000366481 PLNP26678 52 aa15.17■□□□□ 0.02
TRIM58-201ENST00000366481 PDE6HQ13956 83 aa15.17■□□□□ 0.02
TRIM58-201ENST00000366481 RNF182Q8N6D2 247 aa15.17■□□□□ 0.02
TRIM58-201ENST00000366481 LY6LH3BQJ8 138 aa15.17■□□□□ 0.02
TRIM58-201ENST00000366481 ANXA2RQ3ZCQ2 193 aa15.17■□□□□ 0.02
TRIM58-201ENST00000366481 USP9XQ93008 2570 aaPredicted RBP15.17■□□□□ 0.02
TRIM58-201ENST00000366481 FANCD2OSQ96PS1 177 aa15.17■□□□□ 0.02
TRIM58-201ENST00000366481 PRO0461Q9UI25 63 aa15.17■□□□□ 0.02
TRIM58-201ENST00000366481 CCDC168Q8NDH2 2452 aa15.16■□□□□ 0.02
TRIM58-201ENST00000366481 TMEM238LA0A1B0GVL6 79 aa15.16■□□□□ 0.02
TRIM58-201ENST00000366481 A6NJY4 79 aa15.16■□□□□ 0.02
TRIM58-201ENST00000366481 GATA3P23771 443 aa15.16■□□□□ 0.02
TRIM58-201ENST00000366481 XGP55808 180 aa15.16■□□□□ 0.02
TRIM58-201ENST00000366481 TMEM78Q5T7P6 136 aa15.16■□□□□ 0.02
TRIM58-201ENST00000366481 NFE4Q86UQ8 179 aa15.16■□□□□ 0.02
TRIM58-201ENST00000366481 PTPN13Q12923 2485 aa15.15■□□□□ 0.02
TRIM58-201ENST00000366481 SPRY2O43597 315 aa15.15■□□□□ 0.02
TRIM58-201ENST00000366481 Q6ZUT4 128 aa15.15■□□□□ 0.02
TRIM58-201ENST00000366481 IL17RELQ6ZVW7 336 aa15.15■□□□□ 0.02
TRIM58-201ENST00000366481 PRSS29PA6NIE9 313 aa15.15■□□□□ 0.02
TRIM58-201ENST00000366481 H7C1H1 209 aa15.15■□□□□ 0.02
TRIM58-201ENST00000366481 C5orf64Q2M2E5 130 aa15.15■□□□□ 0.02
TRIM58-201ENST00000366481 RAB1BQ9H0U4 201 aa15.15■□□□□ 0.02
TRIM58-201ENST00000366481 EMP1P54849 157 aa15.14■□□□□ 0.01
TRIM58-201ENST00000366481 ECSCRQ19T08 205 aa15.14■□□□□ 0.01
TRIM58-201ENST00000366481 CFHR4Q92496 578 aa15.14■□□□□ 0.01
TRIM58-201ENST00000366481 C21orf62Q9NYP8 219 aa15.14■□□□□ 0.01
TRIM58-201ENST00000366481 H7C2G1 150 aa15.14■□□□□ 0.01
TRIM58-201ENST00000366481 MRPS12O15235 138 aaKnown RBP15.14■□□□□ 0.01
TRIM58-201ENST00000366481 PRAC2D3DTV9 90 aa15.13■□□□□ 0.01
TRIM58-201ENST00000366481 CDIP1Q9H305 208 aa15.13■□□□□ 0.01
TRIM58-201ENST00000366481 F8VRH5 84 aa15.13■□□□□ 0.01
TRIM58-201ENST00000366481 MORN3Q6PF18 240 aaPredicted RBP15.13■□□□□ 0.01
TRIM58-201ENST00000366481 PRADC1Q9BSG0 188 aa15.13■□□□□ 0.01
TRIM58-201ENST00000366481 TRBV7-3A0A075B6L6 115 aa15.12■□□□□ 0.01
TRIM58-201ENST00000366481 F8W735 103 aaPredicted RBP15.12■□□□□ 0.01
TRIM58-201ENST00000366481 LINC01559Q495D7 138 aa15.12■□□□□ 0.01
TRIM58-201ENST00000366481 KLHL30-AS1Q8NEE0 82 aa15.12■□□□□ 0.01
TRIM58-201ENST00000366481 B5MCH6 92 aa15.12■□□□□ 0.01
TRIM58-201ENST00000366481 SLC25A16P16260 332 aa15.12■□□□□ 0.01
TRIM58-201ENST00000366481 PRTN3P24158 256 aa15.12■□□□□ 0.01
TRIM58-201ENST00000366481 ZNF462Q96JM2 2506 aa15.12■□□□□ 0.01
TRIM58-201ENST00000366481 CUBNO60494 3623 aa15.12■□□□□ 0.01
TRIM58-201ENST00000366481 IGHV3OR16-10A0A075B7F0 116 aa15.11■□□□□ 0.01
TRIM58-201ENST00000366481 M0R381 172 aa15.11■□□□□ 0.01
TRIM58-201ENST00000366481 ZFP36P26651 326 aaKnown RBP15.11■□□□□ 0.01
TRIM58-201ENST00000366481 CFAP126Q5VTH2 177 aa15.11■□□□□ 0.01
TRIM58-201ENST00000366481 VMO1Q7Z5L0 202 aa15.11■□□□□ 0.01
TRIM58-201ENST00000366481 TEX29Q8N6K0 151 aa15.11■□□□□ 0.01
TRIM58-201ENST00000366481 LINC00527Q9UJ94 153 aa15.11■□□□□ 0.01
TRIM58-201ENST00000366481 LINC01548A6NM66 108 aa15.11■□□□□ 0.01
TRIM58-201ENST00000366481 LGALS1P09382 135 aaKnown RBP15.11■□□□□ 0.01
TRIM58-201ENST00000366481 TIMD4Q96H15 378 aa15.11■□□□□ 0.01
TRIM58-201ENST00000366481 KIR2DL4Q99706 377 aa15.11■□□□□ 0.01
TRIM58-201ENST00000366481 SMCPP49901 116 aaPredicted RBP15.1■□□□□ 0.01
TRIM58-201ENST00000366481 PPDPFLQ8WWR9 84 aa15.1■□□□□ 0.01
TRIM58-201ENST00000366481 MGPP08493 103 aa15.1■□□□□ 0.01
TRIM58-201ENST00000366481 A8MWV9 139 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms