RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 IGHV3-30P01768 117 aa14.06□□□□□ -0.16
CD47-202ENST00000361309 IGHV3-33P01772 117 aa14.06□□□□□ -0.16
CD47-202ENST00000361309 TYMSP04818 313 aa14.06□□□□□ -0.16
CD47-202ENST00000361309 PFN1P07737 140 aaKnown RBP14.06□□□□□ -0.16
CD47-202ENST00000361309 IGHV3-30-3P0DP02 117 aa14.06□□□□□ -0.16
CD47-202ENST00000361309 IGHV3-30-5P0DP03 117 aa14.06□□□□□ -0.16
CD47-202ENST00000361309 RPH3ALQ9UNE2 315 aa14.06□□□□□ -0.16
CD47-202ENST00000361309 TRAV21A0A0B4J279 112 aa14.05□□□□□ -0.16
CD47-202ENST00000361309 SIX6O95475 246 aa14.05□□□□□ -0.16
CD47-202ENST00000361309 SLC25A29Q8N8R3 303 aa14.05□□□□□ -0.16
CD47-202ENST00000361309 FAM240BA0A1B0GVZ2 78 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 PGPA6NDG6 321 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 FBLL1A6NHQ2 334 aaKnown RBP14.04□□□□□ -0.16
CD47-202ENST00000361309 F6UZH7 168 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 C1QBP02746 253 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 LRRC37A5PQ49AS3 106 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 KHDC3LQ587J8 217 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 FFAR4Q5NUL3 377 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 SDF2L1Q9HCN8 221 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 OTORQ9NRC9 128 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 BOLA1Q9Y3E2 137 aa14.04□□□□□ -0.16
CD47-202ENST00000361309 H0YIZ8 118 aa14.03□□□□□ -0.16
CD47-202ENST00000361309 EIF3GO75821 320 aaKnown RBP eCLIP14.03□□□□□ -0.16
CD47-202ENST00000361309 PLA2G1BP04054 148 aaKnown RBP14.03□□□□□ -0.16
CD47-202ENST00000361309 CMTM2Q8TAZ6 248 aa14.03□□□□□ -0.16
CD47-202ENST00000361309 TVP23CQ96ET8 276 aa14.03□□□□□ -0.16
CD47-202ENST00000361309 PRADC1Q9BSG0 188 aa14.03□□□□□ -0.16
CD47-202ENST00000361309 TAS2R45P59539 299 aa14.02□□□□□ -0.17
CD47-202ENST00000361309 LELP1Q5T871 98 aa14.02□□□□□ -0.17
CD47-202ENST00000361309 GOLT1AQ6ZVE7 132 aa14.02□□□□□ -0.17
CD47-202ENST00000361309 ATP5SQ99766 215 aa14.02□□□□□ -0.17
CD47-202ENST00000361309 KRTAP29-1A8MX34 341 aaPredicted RBP14.01□□□□□ -0.17
CD47-202ENST00000361309 WFDC2Q14508 124 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 RHOHQ15669 191 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 ZNF876PQ49A33 203 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 CFAP126Q5VTH2 177 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 LINC00528Q8N1L1 170 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 ASB13Q8WXK3 278 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 KCNS1Q96KK3 526 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 NMES1Q9C002 83 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 TREM1Q9NP99 234 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 MBD2Q9UBB5 411 aa14.01□□□□□ -0.17
CD47-202ENST00000361309 TRAV8-1A0A0A6YYK1 113 aa14□□□□□ -0.17
CD47-202ENST00000361309 IGHV3-73A0A0B4J1V6 119 aa14□□□□□ -0.17
CD47-202ENST00000361309 TRBV6-4A0A1B0GX49 114 aa14□□□□□ -0.17
CD47-202ENST00000361309 RS1O15537 224 aa14□□□□□ -0.17
CD47-202ENST00000361309 FAM74A1Q5RGS3 127 aa14□□□□□ -0.17
CD47-202ENST00000361309 DPPA3Q6W0C5 159 aa14□□□□□ -0.17
CD47-202ENST00000361309 Q6ZSA8 131 aa14□□□□□ -0.17
CD47-202ENST00000361309 TM2D2Q9BX73 214 aa14□□□□□ -0.17
CD47-202ENST00000361309 LAGE3Q14657 143 aa13.99□□□□□ -0.17
CD47-202ENST00000361309 CCDC32Q9BV29 185 aa13.99□□□□□ -0.17
CD47-202ENST00000361309 CIDEAO60543 219 aa13.98□□□□□ -0.17
CD47-202ENST00000361309 GNG5P63218 68 aa13.98□□□□□ -0.17
CD47-202ENST00000361309 Q8N3U1 123 aa13.98□□□□□ -0.17
CD47-202ENST00000361309 ATP6V0E2Q8NHE4 81 aa13.98□□□□□ -0.17
CD47-202ENST00000361309 GTSF1LQ9H1H1 148 aa13.98□□□□□ -0.17
CD47-202ENST00000361309 MZT2BQ6NZ67 158 aa13.97□□□□□ -0.17
CD47-202ENST00000361309 LRP1Q07954 4544 aaKnown RBP13.96□□□□□ -0.17
CD47-202ENST00000361309 LECT2O14960 151 aa13.96□□□□□ -0.17
CD47-202ENST00000361309 ARL6IP6Q8N6S5 226 aa13.96□□□□□ -0.17
CD47-202ENST00000361309 SCGB1C1Q8TD33 95 aa13.96□□□□□ -0.17
CD47-202ENST00000361309 DEFB104AQ8WTQ1 72 aa13.96□□□□□ -0.17
CD47-202ENST00000361309 SGK494Q96LW2 274 aa13.96□□□□□ -0.17
CD47-202ENST00000361309 C11orf21Q9P2W6 132 aa13.96□□□□□ -0.17
CD47-202ENST00000361309 HSPB11Q9Y547 144 aa13.96□□□□□ -0.17
CD47-202ENST00000361309 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.95□□□□□ -0.18
CD47-202ENST00000361309 SMIM3Q9BZL3 60 aa13.95□□□□□ -0.18
CD47-202ENST00000361309 PGPEP1LA6NFU8 196 aa13.94□□□□□ -0.18
CD47-202ENST00000361309 ZNF80P51504 273 aaPredicted RBP13.94□□□□□ -0.18
CD47-202ENST00000361309 CYCSP99999 105 aaKnown RBP13.94□□□□□ -0.18
CD47-202ENST00000361309 PQLC2Q6ZP29 291 aa13.94□□□□□ -0.18
CD47-202ENST00000361309 C9orf85Q96MD7 179 aa13.94□□□□□ -0.18
CD47-202ENST00000361309 MGST1P10620 155 aaKnown RBP13.93□□□□□ -0.18
CD47-202ENST00000361309 ASAH1Q13510 395 aa13.93□□□□□ -0.18
CD47-202ENST00000361309 ZNF506Q5JVG8 444 aa13.93□□□□□ -0.18
CD47-202ENST00000361309 PPP1R1CQ8WVI7 109 aa13.93□□□□□ -0.18
CD47-202ENST00000361309 NDFIP1Q9BT67 221 aa13.93□□□□□ -0.18
CD47-202ENST00000361309 TRAV8-3A0A0A6YYJ7 113 aa13.92□□□□□ -0.18
CD47-202ENST00000361309 A0A1W2PPV4 95 aa13.92□□□□□ -0.18
CD47-202ENST00000361309 ACOT6Q3I5F7 207 aaPredicted RBP13.92□□□□□ -0.18
CD47-202ENST00000361309 LINC01620Q4KN68 170 aa13.92□□□□□ -0.18
CD47-202ENST00000361309 TMEM75Q8N9X5 138 aa13.92□□□□□ -0.18
CD47-202ENST00000361309 TAAR5O14804 337 aa13.91□□□□□ -0.18
CD47-202ENST00000361309 HMGB3O15347 200 aaKnown RBP13.91□□□□□ -0.18
CD47-202ENST00000361309 H2BFSP57053 126 aa13.91□□□□□ -0.18
CD47-202ENST00000361309 DAZ4Q86SG3 579 aaKnown RBP13.91□□□□□ -0.18
CD47-202ENST00000361309 DAZ3Q9NR90 486 aaKnown RBP13.91□□□□□ -0.18
CD47-202ENST00000361309 GCGP01275 180 aa13.9□□□□□ -0.18
CD47-202ENST00000361309 RAB2AP61019 212 aa13.9□□□□□ -0.18
CD47-202ENST00000361309 SCXQ7RTU7 201 aa13.9□□□□□ -0.18
CD47-202ENST00000361309 ENKURQ8TC29 256 aa13.9□□□□□ -0.18
CD47-202ENST00000361309 BAALCQ8WXS3 180 aa13.9□□□□□ -0.18
CD47-202ENST00000361309 PTH2Q96A98 100 aa13.9□□□□□ -0.18
CD47-202ENST00000361309 GAGE12JA6NER3 117 aa13.89□□□□□ -0.19
CD47-202ENST00000361309 MPC2O95563 127 aa13.89□□□□□ -0.19
CD47-202ENST00000361309 RNASE3P12724 160 aaKnown RBP13.89□□□□□ -0.19
CD47-202ENST00000361309 RPL12P30050 165 aaKnown RBP13.89□□□□□ -0.19
CD47-202ENST00000361309 GAGE1Q13065 139 aa13.89□□□□□ -0.19
CD47-202ENST00000361309 GAGE4Q13068 117 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms