RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.08□□□□□ -0.64
APP-205ENST00000358918 ZNF815PA8K554 130 aa11.08□□□□□ -0.64
APP-205ENST00000358918 TIMM23O14925 209 aa11.08□□□□□ -0.64
APP-205ENST00000358918 SCGB2A1O75556 95 aa11.08□□□□□ -0.64
APP-205ENST00000358918 UBE2D1P51668 147 aa11.08□□□□□ -0.64
APP-205ENST00000358918 SRSF9Q13242 221 aaKnown RBP eCLIP11.08□□□□□ -0.64
APP-205ENST00000358918 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
APP-205ENST00000358918 PTH2Q96A98 100 aa11.08□□□□□ -0.64
APP-205ENST00000358918 ANAPC13Q9BS18 74 aa11.08□□□□□ -0.64
APP-205ENST00000358918 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.64
APP-205ENST00000358918 F8W735 103 aaPredicted RBP11.07□□□□□ -0.64
APP-205ENST00000358918 UBE2D3P61077 147 aa11.07□□□□□ -0.64
APP-205ENST00000358918 UBE2D2P62837 147 aa11.07□□□□□ -0.64
APP-205ENST00000358918 ZFP2Q6ZN57 461 aa11.07□□□□□ -0.64
APP-205ENST00000358918 CARD19Q96LW7 228 aa11.07□□□□□ -0.64
APP-205ENST00000358918 FANCD2OSQ96PS1 177 aa11.07□□□□□ -0.64
APP-205ENST00000358918 SMIM2Q9BVW6 85 aa11.07□□□□□ -0.64
APP-205ENST00000358918 ORMDL2Q53FV1 153 aa11.06□□□□□ -0.64
APP-205ENST00000358918 KLK15Q9H2R5 256 aa11.06□□□□□ -0.64
APP-205ENST00000358918 ATRXP46100 2492 aa11.06□□□□□ -0.64
APP-205ENST00000358918 ZZEF1O43149 2961 aa11.06□□□□□ -0.64
APP-205ENST00000358918 RBAKDNA6NC62 111 aa11.06□□□□□ -0.64
APP-205ENST00000358918 PRAC2D3DTV9 90 aa11.06□□□□□ -0.64
APP-205ENST00000358918 IGHV3-23P01764 117 aa11.06□□□□□ -0.64
APP-205ENST00000358918 CD3EP07766 207 aa11.06□□□□□ -0.64
APP-205ENST00000358918 SPANXN1Q5VSR9 72 aa11.06□□□□□ -0.64
APP-205ENST00000358918 NEXN-AS1Q8NBZ9 246 aa11.06□□□□□ -0.64
APP-205ENST00000358918 LY6LH3BQJ8 138 aa11.05□□□□□ -0.64
APP-205ENST00000358918 ZNF688P0C7X2 276 aa11.05□□□□□ -0.64
APP-205ENST00000358918 SLC25A16P16260 332 aa11.05□□□□□ -0.64
APP-205ENST00000358918 TOMM6Q96B49 74 aa11.05□□□□□ -0.64
APP-205ENST00000358918 NBASA2RRP1 2371 aa11.05□□□□□ -0.64
APP-205ENST00000358918 A8MWV9 139 aa11.05□□□□□ -0.64
APP-205ENST00000358918 GATA3P23771 443 aa11.05□□□□□ -0.64
APP-205ENST00000358918 CDSNQ15517 529 aa11.05□□□□□ -0.64
APP-205ENST00000358918 C11orf21Q9P2W6 132 aa11.05□□□□□ -0.64
APP-205ENST00000358918 ABCA1O95477 2261 aa11.05□□□□□ -0.64
APP-205ENST00000358918 TRBV20-1A0A075B6N2 111 aa11.04□□□□□ -0.64
APP-205ENST00000358918 IGHV7-4-1A0A0J9YVY3 117 aa11.04□□□□□ -0.64
APP-205ENST00000358918 PRSS29PA6NIE9 313 aa11.04□□□□□ -0.64
APP-205ENST00000358918 ZFAND6Q6FIF0 208 aa11.04□□□□□ -0.64
APP-205ENST00000358918 SLC50A1Q9BRV3 221 aa11.04□□□□□ -0.64
APP-205ENST00000358918 PLEKHB2Q96CS7 222 aa11.04□□□□□ -0.64
APP-205ENST00000358918 ONECUT1Q9UBC0 465 aa11.04□□□□□ -0.64
APP-205ENST00000358918 AGRNO00468 2067 aa11.03□□□□□ -0.64
APP-205ENST00000358918 TMEM262E9PQX1 116 aa11.03□□□□□ -0.64
APP-205ENST00000358918 RNF182Q8N6D2 247 aa11.03□□□□□ -0.64
APP-205ENST00000358918 SS18L2Q9UHA2 77 aa11.03□□□□□ -0.64
APP-205ENST00000358918 IGHV4-4A0A075B6R2 117 aa11.03□□□□□ -0.64
APP-205ENST00000358918 H3BVH4 76 aa11.03□□□□□ -0.64
APP-205ENST00000358918 GAGE5Q13069 117 aa11.03□□□□□ -0.64
APP-205ENST00000358918 GAGE6Q13070 117 aa11.03□□□□□ -0.64
APP-205ENST00000358918 TEX29Q8N6K0 151 aa11.03□□□□□ -0.64
APP-205ENST00000358918 NPBQ8NG41 125 aa11.03□□□□□ -0.64
APP-205ENST00000358918 IGFBPL1Q8WX77 278 aa11.03□□□□□ -0.64
APP-205ENST00000358918 TCL1BO95988 128 aa11.02□□□□□ -0.65
APP-205ENST00000358918 ADORA2A-AS1P86434 159 aa11.02□□□□□ -0.65
APP-205ENST00000358918 SBSPONQ8IVN8 264 aa11.02□□□□□ -0.65
APP-205ENST00000358918 BAALCQ8WXS3 180 aa11.02□□□□□ -0.65
APP-205ENST00000358918 IGHV3OR16-8A0A075B7F1 116 aa11.02□□□□□ -0.65
APP-205ENST00000358918 B9A039 149 aa11.02□□□□□ -0.65
APP-205ENST00000358918 CTSGP08311 255 aa11.02□□□□□ -0.65
APP-205ENST00000358918 CD7P09564 240 aa11.02□□□□□ -0.65
APP-205ENST00000358918 HES1Q14469 280 aa11.02□□□□□ -0.65
APP-205ENST00000358918 NDUFA11Q86Y39 141 aa11.02□□□□□ -0.65
APP-205ENST00000358918 AGPAT4-IT1Q9H0P7 198 aa11.02□□□□□ -0.65
APP-205ENST00000358918 LINC01548A6NM66 108 aa11.01□□□□□ -0.65
APP-205ENST00000358918 LYNX1G3V0Z9 82 aa11.01□□□□□ -0.65
APP-205ENST00000358918 LYNX1P0DP58 116 aa11.01□□□□□ -0.65
APP-205ENST00000358918 COX6B1P14854 86 aa11.01□□□□□ -0.65
APP-205ENST00000358918 FBXL19-AS1Q494R0 122 aa11.01□□□□□ -0.65
APP-205ENST00000358918 ANKRD29Q8N6D5 301 aa11.01□□□□□ -0.65
APP-205ENST00000358918 COL6A6A6NMZ7 2263 aa11.01□□□□□ -0.65
APP-205ENST00000358918 MALRD1Q5VYJ5 2156 aa11.01□□□□□ -0.65
APP-205ENST00000358918 SUMO2P61956 95 aaKnown RBP11.01□□□□□ -0.65
APP-205ENST00000358918 LY6DQ14210 128 aa11.01□□□□□ -0.65
APP-205ENST00000358918 C2orf66Q6UXQ4 117 aa11□□□□□ -0.65
APP-205ENST00000358918 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11□□□□□ -0.65
APP-205ENST00000358918 RASL10AQ92737 203 aa11□□□□□ -0.65
APP-205ENST00000358918 KIR2DL4Q99706 377 aa11□□□□□ -0.65
APP-205ENST00000358918 CHD8Q9HCK8 2581 aa11□□□□□ -0.65
APP-205ENST00000358918 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
APP-205ENST00000358918 DPM3Q9P2X0 92 aa10.99□□□□□ -0.65
APP-205ENST00000358918 NCOR2Q9Y618 2525 aa10.99□□□□□ -0.65
APP-205ENST00000358918 SCGB1C2P0DMR2 95 aa10.99□□□□□ -0.65
APP-205ENST00000358918 HERVK_113P61574 105 aa10.99□□□□□ -0.65
APP-205ENST00000358918 TGFAP01135 160 aa10.98□□□□□ -0.65
APP-205ENST00000358918 KLHL30-AS1Q8NEE0 82 aa10.98□□□□□ -0.65
APP-205ENST00000358918 ANKHD1Q8IWZ3 2542 aaKnown RBP10.98□□□□□ -0.65
APP-205ENST00000358918 NDPQ00604 133 aa10.98□□□□□ -0.65
APP-205ENST00000358918 CITED1Q99966 193 aa10.98□□□□□ -0.65
APP-205ENST00000358918 ABCA4P78363 2273 aa10.98□□□□□ -0.65
APP-205ENST00000358918 A0A0J9YY99 117 aa10.97□□□□□ -0.65
APP-205ENST00000358918 TPRP12270 2363 aaKnown RBP10.97□□□□□ -0.65
APP-205ENST00000358918 B5MCH6 92 aa10.97□□□□□ -0.65
APP-205ENST00000358918 C10orf126Q8N4M7 172 aa10.97□□□□□ -0.65
APP-205ENST00000358918 BUB3O43684 328 aa10.96□□□□□ -0.65
APP-205ENST00000358918 CFC1BP0CG36 223 aa10.96□□□□□ -0.65
APP-205ENST00000358918 CFC1P0CG37 223 aa10.96□□□□□ -0.65
APP-205ENST00000358918 IGHV3-66A0A0C4DH42 116 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms