RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 TET2Q6N021 2002 aaPredicted RBP9.61□□□□□ -0.87
COL20A1-201ENST00000358894 TRBV7-1A0A0A6YYK4 115 aa9.61□□□□□ -0.87
COL20A1-201ENST00000358894 GDF5OSQ5U4N7 250 aa9.61□□□□□ -0.87
COL20A1-201ENST00000358894 RNF114Q9Y508 228 aa9.61□□□□□ -0.87
COL20A1-201ENST00000358894 IGHV3OR16-12A0A075B7B8 117 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 KLF12Q9Y4X4 402 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 MYO18BQ8IUG5 2567 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 NPYP01303 97 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 EGR2P11161 476 aaPredicted RBP9.6□□□□□ -0.87
COL20A1-201ENST00000358894 CTRLP40313 264 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 ADORA2A-AS1P86434 159 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 TNFRSF6BO95407 300 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 KLF5Q13887 457 aaPredicted RBP9.6□□□□□ -0.87
COL20A1-201ENST00000358894 C14orf178Q8N769 122 aaPredicted RBP9.6□□□□□ -0.87
COL20A1-201ENST00000358894 NACAE9PAV3 2078 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 TRBV20-1A0A075B6N2 111 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 IGHV7-81A0A0B4J1V7 117 aa9.6□□□□□ -0.87
COL20A1-201ENST00000358894 PCSK5Q92824 1860 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 TRAV2A0A0B4J234 112 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 OVOL3O00110 214 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 GAGE7O76087 117 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 ZNF688P0C7X2 276 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 HOXB4P17483 251 aaPredicted RBP9.59□□□□□ -0.87
COL20A1-201ENST00000358894 GAGE4Q13068 117 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 IGLV11-55A0A075B6I3 123 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 SRSF1Q07955 248 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL20A1-201ENST00000358894 C9orf139Q6ZV77 190 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 DYNAPQ8N1N2 210 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 RAX2Q96IS3 184 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 HERV-K104P63124 156 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 C8orf86Q6ZUL3 223 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 DKK2Q9UBU2 259 aa9.59□□□□□ -0.87
COL20A1-201ENST00000358894 FCN3O75636 299 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 CTSGP08311 255 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 DUX5Q96PT3 197 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 MYO15AQ9UKN7 3530 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 MGAQ8IWI9 3026 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 TRAV26-2A0A0B4J265 109 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 ZFP36P26651 326 aaKnown RBP9.58□□□□□ -0.88
COL20A1-201ENST00000358894 MSRB1Q9NZV6 116 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 SPRY2O43597 315 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 TMEM190Q8WZ59 177 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 RHPN1-AS1Q9BWJ2 59 aa9.58□□□□□ -0.88
COL20A1-201ENST00000358894 FRYLO94915 3013 aa9.57□□□□□ -0.88
COL20A1-201ENST00000358894 MAPK1IP1LQ8NDC0 245 aa9.57□□□□□ -0.88
COL20A1-201ENST00000358894 A0A0U1RRA0 63 aa9.57□□□□□ -0.88
COL20A1-201ENST00000358894 LAGE3Q14657 143 aa9.57□□□□□ -0.88
COL20A1-201ENST00000358894 SPTBN5Q9NRC6 3674 aaKnown RBP9.57□□□□□ -0.88
COL20A1-201ENST00000358894 TRAV8-4A0A0B4J246 113 aa9.57□□□□□ -0.88
COL20A1-201ENST00000358894 TMEM8BA6NDV4 472 aa9.57□□□□□ -0.88
COL20A1-201ENST00000358894 OVOL1O14753 267 aa9.57□□□□□ -0.88
COL20A1-201ENST00000358894 FANCD2OSQ96PS1 177 aa9.57□□□□□ -0.88
COL20A1-201ENST00000358894 LINC01549A6NIU2 74 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 C9JAW5 83 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 SPATA12Q7Z6I5 190 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 NPBQ8NG41 125 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 ZNF747Q9BV97 191 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 SCRT2Q9NQ03 307 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 C19orf71A6NCJ1 209 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 GATA1P15976 413 aaPredicted RBP9.56□□□□□ -0.88
COL20A1-201ENST00000358894 Q8N9W7 124 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 MBD6Q96DN6 1003 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 AGPAT4-IT1Q9H0P7 198 aa9.56□□□□□ -0.88
COL20A1-201ENST00000358894 IGHV1-69DA0A0B4J2H0 117 aa9.55□□□□□ -0.88
COL20A1-201ENST00000358894 IGHV1-69P01742 117 aa9.55□□□□□ -0.88
COL20A1-201ENST00000358894 NPC2P61916 151 aa9.55□□□□□ -0.88
COL20A1-201ENST00000358894 PPDPFLQ8WWR9 84 aa9.55□□□□□ -0.88
COL20A1-201ENST00000358894 MLST8Q9BVC4 326 aa9.55□□□□□ -0.88
COL20A1-201ENST00000358894 PRAC2D3DTV9 90 aa9.55□□□□□ -0.88
COL20A1-201ENST00000358894 RNASE1P07998 156 aaKnown RBP9.54□□□□□ -0.88
COL20A1-201ENST00000358894 FOXE3Q13461 319 aa9.54□□□□□ -0.88
COL20A1-201ENST00000358894 ORMDL2Q53FV1 153 aa9.54□□□□□ -0.88
COL20A1-201ENST00000358894 DTX2Q86UW9 622 aa9.54□□□□□ -0.88
COL20A1-201ENST00000358894 LINC00477Q96M19 166 aa9.54□□□□□ -0.88
COL20A1-201ENST00000358894 ZFYVE26Q68DK2 2539 aa9.54□□□□□ -0.88
COL20A1-201ENST00000358894 A0A1B0GXF2 115 aa9.54□□□□□ -0.88
COL20A1-201ENST00000358894 LINC00310P59036 64 aa9.54□□□□□ -0.88
COL20A1-201ENST00000358894 TNRC6BQ9UPQ9 1833 aaKnown RBP9.54□□□□□ -0.88
COL20A1-201ENST00000358894 IGKV3D-20A0A0C4DH25 116 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 CENPVL3A0A0U1RRI6 287 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 C2orf70A6NJV1 201 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 FAM223BA6NKX1 122 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 NPIPB6E9PJ23 425 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 F6UB75 175 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 PPP1R17O96001 155 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 FXYD2P54710 66 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 FAM223AQ8IWN6 122 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 C11orf44Q8N8P7 122 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 RNF183Q96D59 192 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 PRSS22Q9GZN4 317 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 A0A087WWL8 130 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 PRSS29PA6NIE9 313 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 B4DSR2 109 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 ABCA2Q9BZC7 2435 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 WI2-2373I1.2A0A1W2PRP0 233 aa9.53□□□□□ -0.88
COL20A1-201ENST00000358894 CFHR4Q92496 578 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms