RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 F8W735 103 aaPredicted RBP8.21□□□□□ -1.09
CAPN3-205ENST00000357568 UBE2D3P61077 147 aa8.21□□□□□ -1.09
CAPN3-205ENST00000357568 UBE2D2P62837 147 aa8.21□□□□□ -1.09
CAPN3-205ENST00000357568 FANCD2OSQ96PS1 177 aa8.21□□□□□ -1.09
CAPN3-205ENST00000357568 C21orf62Q9NYP8 219 aa8.21□□□□□ -1.09
CAPN3-205ENST00000357568 CFAP46Q8IYW2 2715 aa8.21□□□□□ -1.09
CAPN3-205ENST00000357568 TRBV20-1A0A075B6N2 111 aa8.21□□□□□ -1.1
CAPN3-205ENST00000357568 KALRNO60229 2985 aa8.21□□□□□ -1.1
CAPN3-205ENST00000357568 COX6B1P14854 86 aa8.21□□□□□ -1.1
CAPN3-205ENST00000357568 KLK9Q2XQG4 91 aa8.21□□□□□ -1.1
CAPN3-205ENST00000357568 KLK9Q9UKQ9 250 aa8.21□□□□□ -1.1
CAPN3-205ENST00000357568 ZNF462Q96JM2 2506 aa8.21□□□□□ -1.1
CAPN3-205ENST00000357568 CHD6Q8TD26 2715 aa8.21□□□□□ -1.1
CAPN3-205ENST00000357568 GAS8-AS1O95177 125 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 Q8TAT8 98 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 TOMM6Q96B49 74 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 C20orf78Q9BR46 151 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 SMAD5-AS1Q9Y6J3 95 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 LGALS1P09382 135 aaKnown RBP8.2□□□□□ -1.1
CAPN3-205ENST00000357568 AMTNQ6UX39 209 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 C22orf34Q6ZV56 151 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 SYT8Q8NBV8 401 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 NEXN-AS1Q8NBZ9 246 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 SMIM2Q9BVW6 85 aa8.2□□□□□ -1.1
CAPN3-205ENST00000357568 CENPVL3A0A0U1RRI6 287 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 SPINK8P0C7L1 97 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 SMCPP49901 116 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-205ENST00000357568 TEN1Q86WV5 123 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 TNFRSF18Q9Y5U5 241 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 UBR5O95071 2799 aaPredicted RBP8.19□□□□□ -1.1
CAPN3-205ENST00000357568 TMEM262E9PQX1 116 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 INSL3P51460 131 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 ATP5G2Q06055 141 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 Q6ZUT4 128 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 CFHR4Q92496 578 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 ERG28Q9UKR5 140 aa8.19□□□□□ -1.1
CAPN3-205ENST00000357568 IGHV7-4-1A0A0J9YVY3 117 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 M0R381 172 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 CD3EP07766 207 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 GATA1P15976 413 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-205ENST00000357568 ERCC8Q13216 396 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 PAPPA-AS1Q5QFB9 102 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 TMEM78Q5T7P6 136 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 IGKV3D-20A0A0C4DH25 116 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.18□□□□□ -1.1
CAPN3-205ENST00000357568 TIMM23O14925 209 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 BSPH1Q075Z2 132 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 DYNAPQ8N1N2 210 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 LENEPQ9Y5L5 61 aa8.18□□□□□ -1.1
CAPN3-205ENST00000357568 LY6G5BQ8NDX9 201 aa8.17□□□□□ -1.1
CAPN3-205ENST00000357568 RNF183Q96D59 192 aa8.17□□□□□ -1.1
CAPN3-205ENST00000357568 PPP1R17O96001 155 aa8.17□□□□□ -1.1
CAPN3-205ENST00000357568 CITED1Q99966 193 aa8.17□□□□□ -1.1
CAPN3-205ENST00000357568 DYNLRB1Q9NP97 96 aa8.17□□□□□ -1.1
CAPN3-205ENST00000357568 DPM3Q9P2X0 92 aa8.17□□□□□ -1.1
CAPN3-205ENST00000357568 CTSGP08311 255 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 MED14OSP0DP75 135 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 SMIM20Q8N5G0 67 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 LINC01600Q96MT4 127 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 SCGB3A1Q96QR1 104 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 TRGV3P03979 118 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 CD7P09564 240 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 ID1P41134 155 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 RPL32P62910 135 aaKnown RBP8.16□□□□□ -1.1
CAPN3-205ENST00000357568 C9orf47Q6ZRZ4 202 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 NFE4Q86UQ8 179 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 SMG1Q96Q15 3661 aaKnown RBP8.16□□□□□ -1.1
CAPN3-205ENST00000357568 IGHV1-69DA0A0B4J2H0 117 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 OOSP1A8MZH6 123 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 PRADC1Q9BSG0 188 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 SPANXA1Q9NS26 97 aa8.16□□□□□ -1.1
CAPN3-205ENST00000357568 PLXNB1O43157 2135 aa8.15□□□□□ -1.1
CAPN3-205ENST00000357568 COX7A1P24310 79 aa8.15□□□□□ -1.1
CAPN3-205ENST00000357568 CADP27708 2225 aa8.15□□□□□ -1.1
CAPN3-205ENST00000357568 MALRD1Q5VYJ5 2156 aa8.15□□□□□ -1.11
CAPN3-205ENST00000357568 A8MWV9 139 aa8.15□□□□□ -1.11
CAPN3-205ENST00000357568 B9A039 149 aa8.15□□□□□ -1.11
CAPN3-205ENST00000357568 ZNF688P0C7X2 276 aa8.15□□□□□ -1.11
CAPN3-205ENST00000357568 ASIPP42127 132 aa8.15□□□□□ -1.11
CAPN3-205ENST00000357568 EFNA4P52798 201 aa8.15□□□□□ -1.11
CAPN3-205ENST00000357568 C11orf21Q9P2W6 132 aa8.15□□□□□ -1.11
CAPN3-205ENST00000357568 PCNX1Q96RV3 2341 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 ZNF815PA8K554 130 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 ODF3BA8MYP8 253 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 B5MCH6 92 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 BUB3O43684 328 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 MT-ATP8P03928 68 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 XGP55808 180 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 HERVK_113P61574 105 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 SUMO2P61956 95 aaKnown RBP8.14□□□□□ -1.11
CAPN3-205ENST00000357568 GAGE5Q13069 117 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 GAGE6Q13070 117 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 EBI3Q14213 229 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 M0R1W7 72 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 HLA-DMBP28068 263 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 SPANXN1Q5VSR9 72 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 Q8N6K4 173 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 POM121L12Q8N7R1 296 aa8.14□□□□□ -1.11
CAPN3-205ENST00000357568 BAALCQ8WXS3 180 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms