RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 CACNA1DQ01668 2161 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 ACACAQ13085 2346 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 CRIPAKQ8N1N5 446 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 MAPK1IP1LQ8NDC0 245 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 MYOFQ9NZM1 2061 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 TRAV4A0A0B4J268 109 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 WT1-ASQ06250 92 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 C17orf58Q2M2W7 97 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 ANKRD39Q53RE8 183 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 C8orf31Q8N9H6 132 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 SPANXB1Q9NS25 103 aaPredicted RBP10.13□□□□□ -0.79
SMC4-202ENST00000357388 LRRC37AA6NMS7 1700 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 WDR90Q96KV7 1748 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 WNK3Q9BYP7 1800 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 SEC61GP60059 68 aa10.13□□□□□ -0.79
SMC4-202ENST00000357388 CACNA1BQ00975 2339 aa10.12□□□□□ -0.79
SMC4-202ENST00000357388 ETV2O00321 342 aaPredicted RBP10.12□□□□□ -0.79
SMC4-202ENST00000357388 UQCRQO14949 82 aa10.12□□□□□ -0.79
SMC4-202ENST00000357388 POLEQ07864 2286 aa10.12□□□□□ -0.79
SMC4-202ENST00000357388 COX7B2Q8TF08 81 aa10.12□□□□□ -0.79
SMC4-202ENST00000357388 FAM240AA0A1B0GVK7 77 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 E9PLD3 99 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 FXYD2P54710 66 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 PRR30Q53SZ7 412 aaPredicted RBP10.11□□□□□ -0.79
SMC4-202ENST00000357388 DKK4Q9UBT3 224 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 LGALS9O00182 355 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 Q6ZUT4 128 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 RALGAPA2Q2PPJ7 1873 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 IGF2BP2-AS1Q96M15 143 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 SDK2Q58EX2 2172 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 C15orf65H3BRN8 121 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 ZNF491Q8N8L2 437 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 V9GYY9 64 aa10.11□□□□□ -0.79
SMC4-202ENST00000357388 G3V318 75 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 TRAV12-2A0A075B6T6 113 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 C11orf86A6NJI1 115 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 C14orf132Q9NPU4 83 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 IGKV2D-24A0A075B6R9 120 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 TMEM256-PLSCR3K7ERE1 68 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 C9orf66Q5T8R8 295 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 ALPK2Q86TB3 2170 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 TMEM61Q8N0U2 210 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 DEFB105AQ8NG35 78 aa10.1□□□□□ -0.79
SMC4-202ENST00000357388 CXCL5P42830 114 aa10.09□□□□□ -0.79
SMC4-202ENST00000357388 ATP5EP56381 51 aaPredicted RBP10.09□□□□□ -0.79
SMC4-202ENST00000357388 ATP5EP2Q5VTU8 51 aa10.09□□□□□ -0.79
SMC4-202ENST00000357388 TIMM17AQ99595 171 aa10.09□□□□□ -0.79
SMC4-202ENST00000357388 DAZ2Q13117 558 aaKnown RBP10.08□□□□□ -0.8
SMC4-202ENST00000357388 DAZ4Q86SG3 579 aaKnown RBP10.08□□□□□ -0.8
SMC4-202ENST00000357388 DAZ3Q9NR90 486 aaKnown RBP10.08□□□□□ -0.8
SMC4-202ENST00000357388 THADAQ6YHU6 1953 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 NDUFC2-KCTD14E9PQ53 114 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 XCL1P47992 114 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 NDUFV3P56181 108 aaKnown RBP10.08□□□□□ -0.8
SMC4-202ENST00000357388 FAM236DA0A1B0GTK5 79 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 FAM236CP0DP71 79 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 MED14OSP0DP75 135 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 HIGD2BQ4VC39 106 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 RNASE13Q5GAN3 156 aaKnown RBP10.08□□□□□ -0.8
SMC4-202ENST00000357388 TOMM6Q96B49 74 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 AGPAT4-IT1Q9H0P7 198 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 LOC285556D6RIA3 1793 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 IGKV1OR2-108A0A075B7D4 117 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 MRPL36Q9P0J6 103 aaKnown RBP10.08□□□□□ -0.8
SMC4-202ENST00000357388 VPREB3Q9UKI3 123 aa10.08□□□□□ -0.8
SMC4-202ENST00000357388 A0A0G2JMZ2 1700 aa10.07□□□□□ -0.8
SMC4-202ENST00000357388 LRRC37A2A6NM11 1700 aa10.07□□□□□ -0.8
SMC4-202ENST00000357388 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
SMC4-202ENST00000357388 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
SMC4-202ENST00000357388 LOXP28300 417 aaPredicted RBP10.07□□□□□ -0.8
SMC4-202ENST00000357388 CCL18P55774 89 aa10.07□□□□□ -0.8
SMC4-202ENST00000357388 ARID2Q68CP9 1835 aa10.07□□□□□ -0.8
SMC4-202ENST00000357388 RNF183Q96D59 192 aa10.06□□□□□ -0.8
SMC4-202ENST00000357388 ARFGEF3Q5TH69 2177 aa10.06□□□□□ -0.8
SMC4-202ENST00000357388 BUB3O43684 328 aa10.06□□□□□ -0.8
SMC4-202ENST00000357388 TRBV12-3P01733 135 aa10.06□□□□□ -0.8
SMC4-202ENST00000357388 HIST2H2BCQ6DN03 193 aa10.06□□□□□ -0.8
SMC4-202ENST00000357388 Q8N1Y9 231 aa10.06□□□□□ -0.8
SMC4-202ENST00000357388 COL6A6A6NMZ7 2263 aa10.05□□□□□ -0.8
SMC4-202ENST00000357388 COX7A2LO14548 114 aa10.05□□□□□ -0.8
SMC4-202ENST00000357388 U3KQE9 123 aa10.05□□□□□ -0.8
SMC4-202ENST00000357388 PDCD11Q14690 1871 aaKnown RBP10.05□□□□□ -0.8
SMC4-202ENST00000357388 KIF26BQ2KJY2 2108 aa10.05□□□□□ -0.8
SMC4-202ENST00000357388 NUPR1O60356 82 aa10.05□□□□□ -0.8
SMC4-202ENST00000357388 PLXNA1Q9UIW2 1896 aa10.05□□□□□ -0.8
SMC4-202ENST00000357388 TRBV6-1A0A0K0K1D8 114 aa10.05□□□□□ -0.8
SMC4-202ENST00000357388 GNRH2O43555 120 aa10.05□□□□□ -0.8
SMC4-202ENST00000357388 CCL24O00175 119 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 C3orf22Q8N5N4 141 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 LRRK1Q38SD2 2015 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 A0A0J9YXV3 536 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 K7EQD1 137 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 BRCA1P38398 1863 aaKnown RBP10.04□□□□□ -0.8
SMC4-202ENST00000357388 LECT2O14960 151 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 IGLV3-1P01715 115 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 DOCK3Q8IZD9 2030 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 GP9P14770 177 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 FOXE3Q13461 319 aa10.04□□□□□ -0.8
SMC4-202ENST00000357388 CAMK2N2Q96S95 79 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms