RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 TRAV12-3A0A0B4J271 114 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 A8MZ25 164 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 SRP19P09132 144 aaKnown RBP2.92□□□□□ -1.94
LIG4-201ENST00000356922 ADCYAP1P18509 176 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 RRN3P1Q2M238 152 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 ZNF506Q5JVG8 444 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 BAGE2Q86Y30 109 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 RCHY1Q96PM5 261 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 VAX2Q9UIW0 290 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 PSG8Q9UQ74 426 aa2.92□□□□□ -1.94
LIG4-201ENST00000356922 A0A1W2PPQ1 181 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 CBY3A6NI87 242 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 K7EN84 100 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 M0R036 132 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 TAGLN2P37802 199 aaKnown RBP2.91□□□□□ -1.94
LIG4-201ENST00000356922 LEPP41159 167 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 GNG4P50150 75 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 MUC21Q5SSG8 566 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 FAM159AQ6UWV7 190 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 ZC2HC1AQ96GY0 325 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 IGF2BP2-AS1Q96M15 143 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 OVOL2Q9BRP0 275 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 ATG101Q9BSB4 218 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 MLST8Q9BVC4 326 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 PRO1933Q9H354 126 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 ARL2-SNX15V9GYD0 113 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 X6R8D5 127 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 MUC4Q99102 2169 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 TMSB15BA0A087X1C1 80 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 ZNF727A8MUV8 499 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 KLLNB2CW77 178 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 J3QL48 77 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 INSP01308 110 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 OCC1Q8TAD7 63 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 HIST1H2BAQ96A08 127 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 LINC00477Q96M19 166 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 TMEM218A2RU14 115 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 DLEU1O43261 78 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 PDE6DO43924 150 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 LTAP01374 205 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 HTN3P15516 51 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 ZNF138P52744 262 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 SOHLH1Q5JUK2 328 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 C15orf54Q8N8G6 183 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 C11orf52Q96A22 123 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 MRPL53Q96EL3 112 aaKnown RBP2.91□□□□□ -1.94
LIG4-201ENST00000356922 SMIM7Q9BQ49 75 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 PARLQ9H300 379 aa2.91□□□□□ -1.94
LIG4-201ENST00000356922 PLAC8L1A1L4L8 177 aa2.9□□□□□ -1.94
LIG4-201ENST00000356922 GNRH2O43555 120 aa2.9□□□□□ -1.94
LIG4-201ENST00000356922 GCGP01275 180 aa2.9□□□□□ -1.94
LIG4-201ENST00000356922 MT-ND4LP03901 98 aa2.9□□□□□ -1.94
LIG4-201ENST00000356922 CRISP2P16562 243 aa2.9□□□□□ -1.94
LIG4-201ENST00000356922 CDKN1BP46527 198 aa2.9□□□□□ -1.94
LIG4-201ENST00000356922 RPL19P84098 196 aaKnown RBP2.9□□□□□ -1.94
LIG4-201ENST00000356922 TMEM183BQ1AE95 376 aa2.9□□□□□ -1.94
LIG4-201ENST00000356922 Q86TA4 180 aa2.9□□□□□ -1.94
LIG4-201ENST00000356922 OR11H2Q8NH07 326 aa2.9□□□□□ -1.94
LIG4-201ENST00000356922 RYR3Q15413 4870 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 VPS13DQ5THJ4 4388 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 IGKV3D-20A0A0C4DH25 116 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 RBAKDNA6NC62 111 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 ZNF705GA8MUZ8 300 aaPredicted RBP2.9□□□□□ -1.95
LIG4-201ENST00000356922 SNURFLB1AK76 121 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 M0R143 59 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 ADIRFQ15847 76 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 RNF151Q2KHN1 245 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 MORN3Q6PF18 240 aaPredicted RBP2.9□□□□□ -1.95
LIG4-201ENST00000356922 ZNF705AQ6ZN79 300 aaPredicted RBP2.9□□□□□ -1.95
LIG4-201ENST00000356922 TM2D3Q9BRN9 247 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 SACSQ9NZJ4 4579 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 CENPWQ5EE01 88 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 OR10D4PQ8NGN7 298 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 VPS25Q9BRG1 176 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 MDFICQ9P1T7 246 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 DNAH10Q8IVF4 4471 aa2.9□□□□□ -1.95
LIG4-201ENST00000356922 SERTM2A0A1B0GWG4 89 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 PHOX2AO14813 284 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 DEFB130BP0DP73 79 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 DEFB130AP0DP74 79 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 ERVFC1-1P60608 527 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 GAGE1Q13065 139 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 PYY3Q5JQD4 70 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 BORCS7Q96B45 105 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 RNF183Q96D59 192 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 CLUHP3Q96NS8 147 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 SPATA25Q9BR10 227 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 TXNDC17Q9BRA2 123 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 RNASE7Q9H1E1 156 aaKnown RBP2.89□□□□□ -1.95
LIG4-201ENST00000356922 FRAS1Q86XX4 4008 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 DNAH2Q9P225 4427 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 NACAE9PAV3 2078 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 TRGV2A0A075B6R0 118 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 XKRY2A2RUG3 117 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 C9JCJ5 164 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 AMBPP02760 352 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 GZMBP10144 247 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 LINC00528Q8N1L1 170 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 FMC1Q96HJ9 113 aa2.89□□□□□ -1.95
LIG4-201ENST00000356922 B9D2Q9BPU9 175 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 872.3 ms