RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 PGLYRP4Q96LB8 373 aa13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 A0A1B0GXF2 115 aa13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 FRMD6-AS1P0C7T7 363 aa13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 SPINK13Q1W4C9 94 aa13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 ZFP82Q8N141 532 aa13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 TRAPPC1Q9Y5R8 145 aa13.37□□□□□ -0.27
SMARCD3-202ENST00000356800 TMSB15BA0A087X1C1 80 aa13.36□□□□□ -0.27
SMARCD3-202ENST00000356800 MT-ND6P03923 174 aa13.36□□□□□ -0.27
SMARCD3-202ENST00000356800 TSPOP30536 169 aa13.36□□□□□ -0.27
SMARCD3-202ENST00000356800 TRPT1Q86TN4 253 aaKnown RBP13.36□□□□□ -0.27
SMARCD3-202ENST00000356800 CLUHP3Q96NS8 147 aa13.36□□□□□ -0.27
SMARCD3-202ENST00000356800 TRAV12-2A0A075B6T6 113 aa13.35□□□□□ -0.27
SMARCD3-202ENST00000356800 IGLC6P0CF74 106 aa13.35□□□□□ -0.27
SMARCD3-202ENST00000356800 CDKN1BP46527 198 aa13.35□□□□□ -0.27
SMARCD3-202ENST00000356800 FXYD7P58549 80 aa13.35□□□□□ -0.27
SMARCD3-202ENST00000356800 GFI1BQ5VTD9 330 aa13.35□□□□□ -0.27
SMARCD3-202ENST00000356800 TMEM136Q6ZRR5 245 aa13.35□□□□□ -0.27
SMARCD3-202ENST00000356800 SNURFLB1AK76 121 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 FABP9Q0Z7S8 132 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 OXLD1Q5BKU9 147 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 PRR31Q5SQ13 230 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 STHQ8IWL8 128 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 FRZBQ92765 325 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 A0A1B0GUT8 65 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 C7orf71A4D174 169 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 CRXO43186 299 aaPredicted RBP13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 CTRLP40313 264 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 HBBP68871 147 aa13.34□□□□□ -0.27
SMARCD3-202ENST00000356800 TRAV12-3A0A0B4J271 114 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 A0A1B0GW15 77 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST1H2BKO60814 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 ZNF324O75467 553 aaPredicted RBP13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HLA-DQA1P01909 254 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST1H2BJP06899 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST1H2BOP23527 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST1H2BBP33778 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST1H2BDP58876 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST1H2BCP62807 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST2H2BEQ16778 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 DEFB125Q8N687 156 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 FER1L6-AS1Q8NA97 138 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST1H2BHQ93079 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST1H2BNQ99877 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 HIST1H2BMQ99879 126 aa13.33□□□□□ -0.28
SMARCD3-202ENST00000356800 TRGC1P0CF51 173 aa13.32□□□□□ -0.28
SMARCD3-202ENST00000356800 LYZL1Q6UWQ5 148 aa13.32□□□□□ -0.28
SMARCD3-202ENST00000356800 GTSCR1Q86UQ5 136 aa13.32□□□□□ -0.28
SMARCD3-202ENST00000356800 MRPL18Q9H0U6 180 aaKnown RBP13.32□□□□□ -0.28
SMARCD3-202ENST00000356800 F2Z2F3 143 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 ARMS2P0C7Q2 107 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 RIGQ13278 110 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 BORCS7Q96B45 105 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 TPPP3Q9BW30 176 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 CNFNQ9BYD5 112 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 GRIFINA4D1Z8 144 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 RBMY1A1P0DJD3 496 aaKnown RBP13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 RBMY1CP0DJD4 496 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 CAMPP49913 170 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 RAB4BP61018 213 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 RBMY1FQ15415 496 aaKnown RBP13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 MUC21Q5SSG8 566 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 Q8N1Y9 231 aa13.31□□□□□ -0.28
SMARCD3-202ENST00000356800 S100A8P05109 93 aa13.3□□□□□ -0.28
SMARCD3-202ENST00000356800 NAGKQ9UJ70 344 aa13.3□□□□□ -0.28
SMARCD3-202ENST00000356800 ANXA2RQ3ZCQ2 193 aa13.29□□□□□ -0.28
SMARCD3-202ENST00000356800 GATD1Q8NB37 220 aa13.29□□□□□ -0.28
SMARCD3-202ENST00000356800 SSBP4Q9BWG4 385 aaPredicted RBP13.29□□□□□ -0.28
SMARCD3-202ENST00000356800 S100A6P06703 90 aa13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 RPL35AP18077 110 aaKnown RBP13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 KRTAP10-11P60412 298 aa13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 TDRG1Q3Y452 100 aa13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 DNLZQ5SXM8 178 aa13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 SNAI2O43623 268 aa13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 APCSP02743 223 aa13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 GIG44P09565 113 aaPredicted RBP13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 OR5AL1P0C617 328 aa13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 EGFEM1PQ0D2K5 195 aa13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 KCNS1Q96KK3 526 aa13.28□□□□□ -0.28
SMARCD3-202ENST00000356800 SLAQ13239 276 aa13.27□□□□□ -0.29
SMARCD3-202ENST00000356800 FAM159AQ6UWV7 190 aa13.27□□□□□ -0.29
SMARCD3-202ENST00000356800 XCL2Q9UBD3 114 aa13.27□□□□□ -0.29
SMARCD3-202ENST00000356800 C5orf52A6NGY3 159 aa13.26□□□□□ -0.29
SMARCD3-202ENST00000356800 GNRH2O43555 120 aa13.26□□□□□ -0.29
SMARCD3-202ENST00000356800 MED14OSP0DP75 135 aa13.26□□□□□ -0.29
SMARCD3-202ENST00000356800 ZNF493Q6ZR52 646 aa13.26□□□□□ -0.29
SMARCD3-202ENST00000356800 DNAH3Q8TD57 4116 aa13.26□□□□□ -0.29
SMARCD3-202ENST00000356800 LOC105371267A0A1B0GV96 52 aa13.25□□□□□ -0.29
SMARCD3-202ENST00000356800 G3V4G9 280 aa13.25□□□□□ -0.29
SMARCD3-202ENST00000356800 ASIPP42127 132 aa13.25□□□□□ -0.29
SMARCD3-202ENST00000356800 IGHV4-4A0A075B6R2 117 aa13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 AMBPP02760 352 aa13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 NTF3P20783 257 aa13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 NUTF2P61970 127 aaKnown RBP13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 TP53TG3Q9ULZ0 132 aa13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 IGHV1OR15-1A0A075B7D0 117 aa13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 INSP01308 110 aa13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 RIPPLY3P57055 190 aa13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 SNRPEP62304 92 aaKnown RBP13.24□□□□□ -0.29
SMARCD3-202ENST00000356800 TWIST1Q15672 202 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms