RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 PRSS29PA6NIE9 313 aa11.13□□□□□ -0.63
SREBF1-202ENST00000355815 TEX36Q5VZQ5 186 aa11.13□□□□□ -0.63
SREBF1-202ENST00000355815 CEND1Q8N111 149 aa11.13□□□□□ -0.63
SREBF1-202ENST00000355815 NPFFO15130 113 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 C15orf32Q32M92 178 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 ZNF876PQ49A33 203 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 VMO1Q7Z5L0 202 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 SPATA12Q7Z6I5 190 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 NTN5Q8WTR8 489 aaPredicted RBP11.12□□□□□ -0.63
SREBF1-202ENST00000355815 FXYD5Q96DB9 178 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 PATE2Q6UY27 113 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 ABCA12Q86UK0 2595 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 SHISA9B4DS77 424 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 FGF6P10767 208 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 ATXN8Q156A1 80 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 ADARB2-AS1A8MUL3 147 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 LTAP01374 205 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 C2orf66Q6UXQ4 117 aa11.12□□□□□ -0.63
SREBF1-202ENST00000355815 GAGE12JA6NER3 117 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 K7ENP7 123 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 GAGE7O76087 117 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 GAGE12FP0CL80 117 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 GAGE12GP0CL81 117 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 GAGE12IP0CL82 117 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 GAGE4Q13068 117 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 TP53TG3Q9ULZ0 132 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 TRAV21A0A0B4J279 112 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 SCRT2Q9NQ03 307 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 MSRB1Q9NZV6 116 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 ADGRG4Q8IZF6 3080 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 COX6B1P14854 86 aa11.11□□□□□ -0.63
SREBF1-202ENST00000355815 FAM106AQ4KMX7 169 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 G3V318 75 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 HLA-DMBP28068 263 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 C5orf64Q2M2E5 130 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 BPESC1Q9GZL8 116 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 GFRA4Q9GZZ7 299 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 GAGE5Q13069 117 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 GAGE6Q13070 117 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 C20orf78Q9BR46 151 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 C1QTNF4Q9BXJ3 329 aa11.1□□□□□ -0.63
SREBF1-202ENST00000355815 CGB3P0DN86 165 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 CGB7P0DN87 165 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 ZNF492Q9P255 531 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 HIVEP2P31629 2446 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 MTORP42345 2549 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 G3V4G9 280 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 Q8NA96 180 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 C2orf70A6NJV1 201 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 IGLL5B9A064 214 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 HAX1O00165 279 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 GAGE2AQ6NT46 116 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 MOB4Q9Y3A3 225 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 SLC25A20O43772 301 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 IFITM1P13164 125 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 TMEM101Q96IK0 257 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 SLC50A1Q9BRV3 221 aa11.09□□□□□ -0.63
SREBF1-202ENST00000355815 MYMXA0A1B0GTQ4 84 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 EIF4EBP1Q13541 118 aaPredicted RBP11.08□□□□□ -0.64
SREBF1-202ENST00000355815 TRBV19A0A075B6N1 114 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 POU2AF1Q16633 256 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 OR11H6Q8NGC7 330 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 GTSF1Q8WW33 167 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 ZNF462Q96JM2 2506 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 CT83Q5H943 113 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 IL17RELQ6ZVW7 336 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 C15orf53Q8NAA6 179 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 KLHL30-AS1Q8NEE0 82 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 ZNF503Q96F45 646 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 TP53TG1Q9Y2A0 90 aa11.08□□□□□ -0.64
SREBF1-202ENST00000355815 SNRPD3P62318 126 aaKnown RBP11.07□□□□□ -0.64
SREBF1-202ENST00000355815 GATD1Q8NB37 220 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 MAPK1IP1LQ8NDC0 245 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 DUX3Q96PT4 197 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 SHANK2-AS3Q9BTD1 123 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 C7orf69Q9H7B7 122 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 DMXL2Q8TDJ6 3036 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 EPG5Q9HCE0 2579 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 GNLYP22749 145 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 LOXL1Q08397 574 aaPredicted RBP11.07□□□□□ -0.64
SREBF1-202ENST00000355815 KLF5Q13887 457 aaPredicted RBP11.07□□□□□ -0.64
SREBF1-202ENST00000355815 RRN3P1Q2M238 152 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 LINC01545Q5VT33 79 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 DTX2Q86UW9 622 aa11.07□□□□□ -0.64
SREBF1-202ENST00000355815 C11orf68Q9H3H3 251 aaKnown RBP11.07□□□□□ -0.64
SREBF1-202ENST00000355815 ZNF688P0C7X2 276 aa11.06□□□□□ -0.64
SREBF1-202ENST00000355815 PMVKQ15126 192 aa11.06□□□□□ -0.64
SREBF1-202ENST00000355815 RUSC1-AS1Q66K80 236 aa11.06□□□□□ -0.64
SREBF1-202ENST00000355815 DUX5Q96PT3 197 aa11.06□□□□□ -0.64
SREBF1-202ENST00000355815 COL5A1P20908 1838 aaPredicted RBP11.06□□□□□ -0.64
SREBF1-202ENST00000355815 H3BMM0 161 aa11.06□□□□□ -0.64
SREBF1-202ENST00000355815 UBE2WQ96B02 151 aa11.06□□□□□ -0.64
SREBF1-202ENST00000355815 FAM167A-AS1Q96KT0 104 aa11.06□□□□□ -0.64
SREBF1-202ENST00000355815 PRR25Q96S07 402 aa11.06□□□□□ -0.64
SREBF1-202ENST00000355815 DPH3P1Q9H4G8 78 aa11.06□□□□□ -0.64
SREBF1-202ENST00000355815 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.05□□□□□ -0.64
SREBF1-202ENST00000355815 FOXI2Q6ZQN5 318 aa11.05□□□□□ -0.64
SREBF1-202ENST00000355815 JMJD1CQ15652 2540 aa11.05□□□□□ -0.64
SREBF1-202ENST00000355815 SAA4P35542 130 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms