RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 HAX1O00165 279 aa10.64□□□□□ -0.71
EBF3-201ENST00000355311 TMEM95Q3KNT9 176 aa10.64□□□□□ -0.71
EBF3-201ENST00000355311 NPIPB6E9PJ23 425 aa10.63□□□□□ -0.71
EBF3-201ENST00000355311 ATP6V0BQ99437 205 aa10.63□□□□□ -0.71
EBF3-201ENST00000355311 C11orf21Q9P2W6 132 aa10.63□□□□□ -0.71
EBF3-201ENST00000355311 PRRC2AP48634 2157 aaKnown RBP10.63□□□□□ -0.71
EBF3-201ENST00000355311 TRGV3P03979 118 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 CKS1BP61024 79 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 BLCAPP62952 87 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 CCDC140Q96MF4 163 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 SMIM13P0DJ93 91 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 IGHV4-38-2P0DP08 117 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 RPL7P18124 248 aaKnown RBP10.62□□□□□ -0.71
EBF3-201ENST00000355311 UNQ9165/PRO28630Q6UXU0 137 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 TTC9CQ8N5M4 171 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 SPAG8Q99932 426 aaPredicted RBP10.62□□□□□ -0.71
EBF3-201ENST00000355311 CRYBA4P53673 196 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 SVIPQ8NHG7 77 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 SIRPDQ9H106 197 aa10.62□□□□□ -0.71
EBF3-201ENST00000355311 CENPVL3A0A0U1RRI6 287 aa10.61□□□□□ -0.71
EBF3-201ENST00000355311 M0R1W7 72 aa10.61□□□□□ -0.71
EBF3-201ENST00000355311 IGKV3-20P01619 116 aa10.61□□□□□ -0.71
EBF3-201ENST00000355311 FCER1GP30273 86 aa10.61□□□□□ -0.71
EBF3-201ENST00000355311 LMO4P61968 165 aa10.61□□□□□ -0.71
EBF3-201ENST00000355311 GTSCR1Q86UQ5 136 aa10.61□□□□□ -0.71
EBF3-201ENST00000355311 OR5A1Q8NGJ0 315 aa10.61□□□□□ -0.71
EBF3-201ENST00000355311 AJUBAQ96IF1 538 aa10.61□□□□□ -0.71
EBF3-201ENST00000355311 IGHV4-61A0A0C4DH41 118 aa10.6□□□□□ -0.71
EBF3-201ENST00000355311 AGPAT4-IT1Q9H0P7 198 aa10.6□□□□□ -0.71
EBF3-201ENST00000355311 A0A1B0GV72 72 aa10.6□□□□□ -0.71
EBF3-201ENST00000355311 CD300EQ496F6 205 aaPredicted RBP10.6□□□□□ -0.71
EBF3-201ENST00000355311 C10orf99Q6UWK7 81 aa10.6□□□□□ -0.71
EBF3-201ENST00000355311 ZNF575Q86XF7 245 aa10.6□□□□□ -0.71
EBF3-201ENST00000355311 RNF5Q99942 180 aa10.6□□□□□ -0.71
EBF3-201ENST00000355311 FBXL19-AS1Q494R0 122 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 FAM104BQ5XKR9 115 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 C20orf78Q9BR46 151 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 BUB3O43684 328 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 IGHV4-39P01824 125 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 CT83Q5H943 113 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 IFI27L1Q96BM0 104 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 DUX5Q96PT3 197 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 GFRA4Q9GZZ7 299 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 NPFFO15130 113 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 GATA3P23771 443 aa10.59□□□□□ -0.71
EBF3-201ENST00000355311 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
EBF3-201ENST00000355311 M0R381 172 aa10.58□□□□□ -0.72
EBF3-201ENST00000355311 PRB1P04280 392 aa10.58□□□□□ -0.72
EBF3-201ENST00000355311 ORMDL3Q8N138 153 aa10.58□□□□□ -0.72
EBF3-201ENST00000355311 C16orf92Q96LL3 132 aa10.58□□□□□ -0.72
EBF3-201ENST00000355311 HIF1ANQ9NWT6 349 aa10.58□□□□□ -0.72
EBF3-201ENST00000355311 CLPSL1A2RUU4 121 aa10.58□□□□□ -0.72
EBF3-201ENST00000355311 PF4V1P10720 104 aa10.58□□□□□ -0.72
EBF3-201ENST00000355311 Q8N6K4 173 aa10.58□□□□□ -0.72
EBF3-201ENST00000355311 IGKV3D-20A0A0C4DH25 116 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 H3BVH4 76 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 ZNF502Q8TBZ5 544 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 CHAC1Q9BUX1 264 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 USP24Q9UPU5 2620 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 PRSS1P07477 247 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 EFNA4P52798 201 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 SCGB2A2Q13296 93 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 PRR9Q5T870 116 aa10.57□□□□□ -0.72
EBF3-201ENST00000355311 ITLN2Q8WWU7 325 aaPredicted RBP10.57□□□□□ -0.72
EBF3-201ENST00000355311 SRSF8Q9BRL6 282 aaKnown RBP10.57□□□□□ -0.72
EBF3-201ENST00000355311 H3BUX3 64 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 LEPP41159 167 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 OR9G4Q8NGQ1 327 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 UBE2E1P51965 193 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 C8orf86Q6ZUL3 223 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 C20orf173Q96LM9 149 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 AKAP9Q99996 3911 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 LGALS9BQ3B8N2 356 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 OR4X2Q8NGF9 303 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 ZFAND3Q9H8U3 227 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 SMPXQ9UHP9 88 aa10.56□□□□□ -0.72
EBF3-201ENST00000355311 TRBV25-1A0A075B6N4 114 aa10.55□□□□□ -0.72
EBF3-201ENST00000355311 FABP5P3A8MUU1 101 aa10.55□□□□□ -0.72
EBF3-201ENST00000355311 HBDP02042 147 aa10.55□□□□□ -0.72
EBF3-201ENST00000355311 IGHV4-30-2A0A087WSY4 118 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 TRAV8-2A0A0B4J237 113 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 AVPP01185 164 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 SPANXN1Q5VSR9 72 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 DTX2Q86UW9 622 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 MAPKAPK5-AS1Q8N8E1 139 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 PHLDA1Q8WV24 401 aaPredicted RBP10.54□□□□□ -0.72
EBF3-201ENST00000355311 TMEM160Q9NX00 188 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 ATP5J2P56134 94 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 LYPD1Q8N2G4 141 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
EBF3-201ENST00000355311 GEMIN7Q9H840 131 aaKnown RBP10.54□□□□□ -0.72
EBF3-201ENST00000355311 HTN1P15515 57 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 TMEM78Q5T7P6 136 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 ZC2HC1BQ5TFG8 222 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 METTL26Q96S19 204 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 TRAV41A0A0B4J266 112 aa10.53□□□□□ -0.72
EBF3-201ENST00000355311 NDUFS8O00217 210 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms