RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TSPOP30536 169 aa12.79□□□□□ -0.36
VPS13B-201ENST00000355155 TMEM61Q8N0U2 210 aa12.79□□□□□ -0.36
VPS13B-201ENST00000355155 IGKV3-7A0A075B6H7 116 aa12.79□□□□□ -0.36
VPS13B-201ENST00000355155 KHDC1LQ5JSQ8 128 aa12.79□□□□□ -0.36
VPS13B-201ENST00000355155 WFDC3Q8IUB2 231 aa12.79□□□□□ -0.36
VPS13B-201ENST00000355155 FAM110AQ9BQ89 295 aa12.79□□□□□ -0.36
VPS13B-201ENST00000355155 C7orf71A4D174 169 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 NTF3P20783 257 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 PDZD11Q5EBL8 140 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 DEFB125Q8N687 156 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 RNF185Q96GF1 192 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 URB1-AS1Q96HZ7 61 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 RCHY1Q96PM5 261 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 DUX3Q96PT4 197 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 LINC00467Q9BRT7 94 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 LAMTOR2Q9Y2Q5 125 aa12.78□□□□□ -0.36
VPS13B-201ENST00000355155 OR4C46A6NHA9 309 aa12.77□□□□□ -0.36
VPS13B-201ENST00000355155 DYNLRB2Q8TF09 96 aa12.77□□□□□ -0.36
VPS13B-201ENST00000355155 LINC01546A6NGU7 62 aa12.77□□□□□ -0.37
VPS13B-201ENST00000355155 POM121L12Q8N7R1 296 aa12.77□□□□□ -0.37
VPS13B-201ENST00000355155 PPBPP02775 128 aa12.76□□□□□ -0.37
VPS13B-201ENST00000355155 CMC4P56277 68 aaPredicted RBP12.76□□□□□ -0.37
VPS13B-201ENST00000355155 KRTAP10-3P60369 221 aa12.76□□□□□ -0.37
VPS13B-201ENST00000355155 ANXA2RQ3ZCQ2 193 aa12.76□□□□□ -0.37
VPS13B-201ENST00000355155 Q6ZQT7 251 aa12.76□□□□□ -0.37
VPS13B-201ENST00000355155 OTOGQ6ZRI0 2925 aa12.76□□□□□ -0.37
VPS13B-201ENST00000355155 PRSS47A8MTI9 375 aa12.76□□□□□ -0.37
VPS13B-201ENST00000355155 RNASE4P34096 147 aaKnown RBP12.76□□□□□ -0.37
VPS13B-201ENST00000355155 CDKN1BP46527 198 aa12.76□□□□□ -0.37
VPS13B-201ENST00000355155 MAP6D1Q9H9H5 199 aa12.76□□□□□ -0.37
VPS13B-201ENST00000355155 H3BMM0 161 aa12.75□□□□□ -0.37
VPS13B-201ENST00000355155 CD300EQ496F6 205 aaPredicted RBP12.75□□□□□ -0.37
VPS13B-201ENST00000355155 ASIPP42127 132 aa12.75□□□□□ -0.37
VPS13B-201ENST00000355155 MRPL51Q4U2R6 128 aaKnown RBP12.75□□□□□ -0.37
VPS13B-201ENST00000355155 PMCHP20382 165 aa12.75□□□□□ -0.37
VPS13B-201ENST00000355155 TFPI2P48307 235 aa12.75□□□□□ -0.37
VPS13B-201ENST00000355155 TWIST1Q15672 202 aa12.75□□□□□ -0.37
VPS13B-201ENST00000355155 RNASE3P12724 160 aaKnown RBP12.74□□□□□ -0.37
VPS13B-201ENST00000355155 RAB4AP20338 218 aa12.74□□□□□ -0.37
VPS13B-201ENST00000355155 C20orf144Q9BQM9 153 aa12.74□□□□□ -0.37
VPS13B-201ENST00000355155 FASNP49327 2511 aaKnown RBP12.74□□□□□ -0.37
VPS13B-201ENST00000355155 IQCJQ1A5X6 159 aa12.74□□□□□ -0.37
VPS13B-201ENST00000355155 KIR3DS1Q14943 382 aa12.73□□□□□ -0.37
VPS13B-201ENST00000355155 NIT1Q86X76 327 aa12.73□□□□□ -0.37
VPS13B-201ENST00000355155 ORMDL3Q8N138 153 aa12.73□□□□□ -0.37
VPS13B-201ENST00000355155 C9orf85Q96MD7 179 aa12.73□□□□□ -0.37
VPS13B-201ENST00000355155 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
VPS13B-201ENST00000355155 IGLV1-51P01701 117 aa12.73□□□□□ -0.37
VPS13B-201ENST00000355155 AMN1Q8IY45 258 aa12.73□□□□□ -0.37
VPS13B-201ENST00000355155 DEFB131AP59861 70 aa12.72□□□□□ -0.37
VPS13B-201ENST00000355155 S100A12P80511 92 aa12.72□□□□□ -0.37
VPS13B-201ENST00000355155 OR10AG1Q8NH19 301 aa12.72□□□□□ -0.37
VPS13B-201ENST00000355155 SELENOKQ9Y6D0 94 aa12.72□□□□□ -0.37
VPS13B-201ENST00000355155 CUBNO60494 3623 aa12.72□□□□□ -0.37
VPS13B-201ENST00000355155 PTH2Q96A98 100 aa12.72□□□□□ -0.37
VPS13B-201ENST00000355155 CCDC168Q8NDH2 2452 aa12.72□□□□□ -0.37
VPS13B-201ENST00000355155 Q6ZWC4 215 aa12.71□□□□□ -0.37
VPS13B-201ENST00000355155 GSN-AS1Q9NRJ2 163 aa12.71□□□□□ -0.37
VPS13B-201ENST00000355155 MSRB1Q9NZV6 116 aa12.71□□□□□ -0.37
VPS13B-201ENST00000355155 CRXO43186 299 aaPredicted RBP12.71□□□□□ -0.37
VPS13B-201ENST00000355155 LINC00614P0C842 121 aa12.7□□□□□ -0.38
VPS13B-201ENST00000355155 BEAN1Q3B7T3 259 aa12.7□□□□□ -0.38
VPS13B-201ENST00000355155 A0A1W2PRX2 142 aa12.7□□□□□ -0.38
VPS13B-201ENST00000355155 RBMY1BA6NDE4 496 aaKnown RBP12.7□□□□□ -0.38
VPS13B-201ENST00000355155 RBMY1EA6NEQ0 496 aaKnown RBP12.7□□□□□ -0.38
VPS13B-201ENST00000355155 RBMY1DP0C7P1 496 aaKnown RBP12.7□□□□□ -0.38
VPS13B-201ENST00000355155 FAM159AQ6UWV7 190 aa12.7□□□□□ -0.38
VPS13B-201ENST00000355155 IGHV3-16A0A0C4DH30 117 aa12.7□□□□□ -0.38
VPS13B-201ENST00000355155 H3BVH4 76 aa12.7□□□□□ -0.38
VPS13B-201ENST00000355155 CD33P20138 364 aa12.7□□□□□ -0.38
VPS13B-201ENST00000355155 ODF3L2Q3SX64 289 aa12.7□□□□□ -0.38
VPS13B-201ENST00000355155 MRAP2Q96G30 205 aa12.7□□□□□ -0.38
VPS13B-201ENST00000355155 D6R8Y8 96 aa12.69□□□□□ -0.38
VPS13B-201ENST00000355155 PRELID3AQ96N28 172 aa12.69□□□□□ -0.38
VPS13B-201ENST00000355155 IGHV1OR15-1A0A075B7D0 117 aa12.69□□□□□ -0.38
VPS13B-201ENST00000355155 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
VPS13B-201ENST00000355155 LINC00482Q8N8I6 264 aa12.69□□□□□ -0.38
VPS13B-201ENST00000355155 C11orf44Q8N8P7 122 aa12.69□□□□□ -0.38
VPS13B-201ENST00000355155 SMIM15Q7Z3B0 74 aa12.68□□□□□ -0.38
VPS13B-201ENST00000355155 SAMD10Q9BYL1 202 aa12.68□□□□□ -0.38
VPS13B-201ENST00000355155 GNRH2O43555 120 aa12.68□□□□□ -0.38
VPS13B-201ENST00000355155 HIST2H2BDQ6DRA6 164 aa12.68□□□□□ -0.38
VPS13B-201ENST00000355155 KNCNA6PVL3 124 aa12.67□□□□□ -0.38
VPS13B-201ENST00000355155 M0R381 172 aa12.67□□□□□ -0.38
VPS13B-201ENST00000355155 AMTP48728 403 aa12.67□□□□□ -0.38
VPS13B-201ENST00000355155 SPANXN1Q5VSR9 72 aa12.67□□□□□ -0.38
VPS13B-201ENST00000355155 NIT2Q9NQR4 276 aa12.67□□□□□ -0.38
VPS13B-201ENST00000355155 KIF25-AS1Q9Y6Z4 181 aa12.67□□□□□ -0.38
VPS13B-201ENST00000355155 MYO9AB2RTY4 2548 aa12.67□□□□□ -0.38
VPS13B-201ENST00000355155 TRAV12-3A0A0B4J271 114 aa12.67□□□□□ -0.38
VPS13B-201ENST00000355155 TRGV11A0A075B6L2 103 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 HSBP1O75506 76 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 TRPT1Q86TN4 253 aaKnown RBP12.66□□□□□ -0.38
VPS13B-201ENST00000355155 Q8N976 141 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 SPINK13Q1W4C9 94 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 CITED1Q99966 193 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 NAGKQ9UJ70 344 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 CKS2P33552 79 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 MUC21Q5SSG8 566 aa12.66□□□□□ -0.38
VPS13B-201ENST00000355155 NRACQ8N912 160 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms