RNA–Protein interactions for RNA: ENST00000347547.6

LRP8-202, Transcript of LDL receptor related protein 8, humanhuman

TSL 1 (best) BASIC

Gene LRP8, Length 2,382 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-202ENST00000347547 NPBQ8NG41 125 aa12.03□□□□□ -0.48
LRP8-202ENST00000347547 BAALCQ8WXS3 180 aa12.03□□□□□ -0.48
LRP8-202ENST00000347547 SMG1Q96Q15 3661 aaKnown RBP12.02□□□□□ -0.48
LRP8-202ENST00000347547 PTPRZ1P23471 2315 aaPredicted RBP12.02□□□□□ -0.49
LRP8-202ENST00000347547 PRAC2D3DTV9 90 aa12.02□□□□□ -0.49
LRP8-202ENST00000347547 SCGB2A1O75556 95 aa12.02□□□□□ -0.49
LRP8-202ENST00000347547 RASL10AQ92737 203 aa12.02□□□□□ -0.49
LRP8-202ENST00000347547 UFC1Q9Y3C8 167 aa12.02□□□□□ -0.49
LRP8-202ENST00000347547 LAMA5O15230 3695 aa12.02□□□□□ -0.49
LRP8-202ENST00000347547 DLX1P56177 255 aa12.01□□□□□ -0.49
LRP8-202ENST00000347547 ABCA1O95477 2261 aa12.01□□□□□ -0.49
LRP8-202ENST00000347547 MALRD1Q5VYJ5 2156 aa12.01□□□□□ -0.49
LRP8-202ENST00000347547 VKORC1Q9BQB6 163 aa12.01□□□□□ -0.49
LRP8-202ENST00000347547 DMXL2Q8TDJ6 3036 aa12.01□□□□□ -0.49
LRP8-202ENST00000347547 TIMM23O14925 209 aa12□□□□□ -0.49
LRP8-202ENST00000347547 A0A0J9YY99 117 aa12□□□□□ -0.49
LRP8-202ENST00000347547 CENPVL3A0A0U1RRI6 287 aa12□□□□□ -0.49
LRP8-202ENST00000347547 SUMO2P61956 95 aaKnown RBP12□□□□□ -0.49
LRP8-202ENST00000347547 C10orf126Q8N4M7 172 aa12□□□□□ -0.49
LRP8-202ENST00000347547 B5MCH6 92 aa11.99□□□□□ -0.49
LRP8-202ENST00000347547 CTSGP08311 255 aa11.99□□□□□ -0.49
LRP8-202ENST00000347547 SPANXN1Q5VSR9 72 aa11.99□□□□□ -0.49
LRP8-202ENST00000347547 SFTA2Q6UW10 78 aa11.99□□□□□ -0.49
LRP8-202ENST00000347547 AJUBAQ96IF1 538 aa11.99□□□□□ -0.49
LRP8-202ENST00000347547 KIR2DL4Q99706 377 aa11.99□□□□□ -0.49
LRP8-202ENST00000347547 ANKRD11Q6UB99 2663 aaPredicted RBP11.99□□□□□ -0.49
LRP8-202ENST00000347547 COX7A1P24310 79 aa11.99□□□□□ -0.49
LRP8-202ENST00000347547 Q6Q795 121 aa11.99□□□□□ -0.49
LRP8-202ENST00000347547 AGPAT4-IT1Q9H0P7 198 aa11.99□□□□□ -0.49
LRP8-202ENST00000347547 FAM90A27PA6NNH2 459 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 CFC1BP0CG36 223 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 CFC1P0CG37 223 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 IGFL3Q6UXB1 125 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 MRPL53Q96EL3 112 aaKnown RBP11.98□□□□□ -0.49
LRP8-202ENST00000347547 SPTBN2O15020 2390 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 IGHV3-30P01768 117 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 IGHV3-30-5P0DP03 117 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 NDUFV3P56181 108 aaKnown RBP11.98□□□□□ -0.49
LRP8-202ENST00000347547 PRB3Q04118 309 aaPredicted RBP11.98□□□□□ -0.49
LRP8-202ENST00000347547 PAPPA-AS1Q5QFB9 102 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 C2orf66Q6UXQ4 117 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 RNASE6Q93091 150 aaKnown RBP11.98□□□□□ -0.49
LRP8-202ENST00000347547 LINC01600Q96MT4 127 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 FAM110AQ9BQ89 295 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 HIF1ANQ9NWT6 349 aa11.98□□□□□ -0.49
LRP8-202ENST00000347547 GAGE2BQ13066 116 aa11.97□□□□□ -0.49
LRP8-202ENST00000347547 GAGE2EQ4V326 116 aa11.97□□□□□ -0.49
LRP8-202ENST00000347547 KLK15Q9H2R5 256 aa11.97□□□□□ -0.49
LRP8-202ENST00000347547 GAGE2DQ9UEU5 116 aa11.97□□□□□ -0.49
LRP8-202ENST00000347547 RP1L1Q8IWN7 2480 aaPredicted RBP11.97□□□□□ -0.49
LRP8-202ENST00000347547 SCGB1C2P0DMR2 95 aa11.97□□□□□ -0.49
LRP8-202ENST00000347547 HERVK_113P61574 105 aa11.97□□□□□ -0.49
LRP8-202ENST00000347547 SPANXA1Q9NS26 97 aa11.97□□□□□ -0.49
LRP8-202ENST00000347547 PRO1854Q9UHT4 67 aa11.97□□□□□ -0.49
LRP8-202ENST00000347547 APC2O95996 2303 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 BSNQ9UPA5 3926 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 GAGE12JA6NER3 117 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 H3BVH4 76 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 M0R381 172 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 SLC25A20O43772 301 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 GAGE7O76087 117 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 GAGE12FP0CL80 117 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 GAGE12GP0CL81 117 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 GAGE12IP0CL82 117 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 GAGE4Q13068 117 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 SLC25A29Q8N8R3 303 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 ATMQ13315 3056 aa11.96□□□□□ -0.49
LRP8-202ENST00000347547 RNF223E7ERA6 249 aa11.96□□□□□ -0.5
LRP8-202ENST00000347547 BSPH1Q075Z2 132 aa11.96□□□□□ -0.5
LRP8-202ENST00000347547 RNF182Q8N6D2 247 aa11.96□□□□□ -0.5
LRP8-202ENST00000347547 ONECUT1Q9UBC0 465 aa11.96□□□□□ -0.5
LRP8-202ENST00000347547 MSRB2Q9Y3D2 182 aa11.96□□□□□ -0.5
LRP8-202ENST00000347547 ROS1P08922 2347 aa11.95□□□□□ -0.5
LRP8-202ENST00000347547 KLHL30-AS1Q8NEE0 82 aa11.95□□□□□ -0.5
LRP8-202ENST00000347547 CEP295Q9C0D2 2601 aa11.95□□□□□ -0.5
LRP8-202ENST00000347547 BUB3O43684 328 aa11.94□□□□□ -0.5
LRP8-202ENST00000347547 SNCGO76070 127 aa11.94□□□□□ -0.5
LRP8-202ENST00000347547 C9orf47Q6ZRZ4 202 aa11.94□□□□□ -0.5
LRP8-202ENST00000347547 IGLV4-69A0A075B6H9 119 aa11.94□□□□□ -0.5
LRP8-202ENST00000347547 IGHV1-69DA0A0B4J2H0 117 aa11.94□□□□□ -0.5
LRP8-202ENST00000347547 TRBV7-9A0A0J9YWB2 115 aa11.94□□□□□ -0.5
LRP8-202ENST00000347547 CRYGDP07320 174 aa11.94□□□□□ -0.5
LRP8-202ENST00000347547 IGHV3-23P01764 117 aa11.93□□□□□ -0.5
LRP8-202ENST00000347547 C11orf86A6NJI1 115 aa11.93□□□□□ -0.5
LRP8-202ENST00000347547 P0DMU3 169 aa11.93□□□□□ -0.5
LRP8-202ENST00000347547 FAM231AP0DMU4 169 aa11.93□□□□□ -0.5
LRP8-202ENST00000347547 FAM231CP0DMU5 169 aa11.93□□□□□ -0.5
LRP8-202ENST00000347547 ZFAND3Q9H8U3 227 aa11.93□□□□□ -0.5
LRP8-202ENST00000347547 DPM3Q9P2X0 92 aa11.93□□□□□ -0.5
LRP8-202ENST00000347547 PPP1R17O96001 155 aa11.92□□□□□ -0.5
LRP8-202ENST00000347547 IFITM1P13164 125 aa11.92□□□□□ -0.5
LRP8-202ENST00000347547 NDPQ00604 133 aa11.92□□□□□ -0.5
LRP8-202ENST00000347547 FOXC1Q12948 553 aa11.92□□□□□ -0.5
LRP8-202ENST00000347547 TIMD4Q96H15 378 aa11.92□□□□□ -0.5
LRP8-202ENST00000347547 RAX2Q96IS3 184 aa11.92□□□□□ -0.5
LRP8-202ENST00000347547 DPH3P1Q9H4G8 78 aa11.92□□□□□ -0.5
LRP8-202ENST00000347547 DYNLRB1Q9NP97 96 aa11.92□□□□□ -0.5
LRP8-202ENST00000347547 TRAV8-2A0A0B4J237 113 aa11.92□□□□□ -0.5
LRP8-202ENST00000347547 TRAV4A0A0B4J268 109 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms