RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 CIDEAO60543 219 aa13.83□□□□□ -0.2
CEACAM3-201ENST00000344550 MED14OSP0DP75 135 aa13.83□□□□□ -0.2
CEACAM3-201ENST00000344550 GNG5P63218 68 aa13.83□□□□□ -0.2
CEACAM3-201ENST00000344550 TRAV4A0A0B4J268 109 aa13.82□□□□□ -0.2
CEACAM3-201ENST00000344550 TRGV4A0A0C4DH28 118 aa13.82□□□□□ -0.2
CEACAM3-201ENST00000344550 GGTLC3B5MD39 225 aa13.82□□□□□ -0.2
CEACAM3-201ENST00000344550 G3V3Q6 166 aa13.82□□□□□ -0.2
CEACAM3-201ENST00000344550 ORM1P02763 201 aa13.82□□□□□ -0.2
CEACAM3-201ENST00000344550 ZFP69Q49AA0 526 aa13.82□□□□□ -0.2
CEACAM3-201ENST00000344550 AKR1C8PQ5T2L2 129 aa13.82□□□□□ -0.2
CEACAM3-201ENST00000344550 NAGKQ9UJ70 344 aa13.82□□□□□ -0.2
CEACAM3-201ENST00000344550 PSG8Q9UQ74 426 aa13.82□□□□□ -0.2
CEACAM3-201ENST00000344550 IGLV2-11P01706 119 aa13.81□□□□□ -0.2
CEACAM3-201ENST00000344550 PFN1P07737 140 aaKnown RBP13.81□□□□□ -0.2
CEACAM3-201ENST00000344550 FLI1Q01543 452 aaPredicted RBP13.81□□□□□ -0.2
CEACAM3-201ENST00000344550 SMUG1Q53HV7 270 aa13.81□□□□□ -0.2
CEACAM3-201ENST00000344550 K7EP13 123 aa13.8□□□□□ -0.2
CEACAM3-201ENST00000344550 IGHV3-53P01767 116 aa13.8□□□□□ -0.2
CEACAM3-201ENST00000344550 TYMSP04818 313 aa13.8□□□□□ -0.2
CEACAM3-201ENST00000344550 PPT1P50897 306 aa13.8□□□□□ -0.2
CEACAM3-201ENST00000344550 ZNF345Q14585 488 aa13.8□□□□□ -0.2
CEACAM3-201ENST00000344550 NEGR1Q7Z3B1 354 aa13.8□□□□□ -0.2
CEACAM3-201ENST00000344550 SH2D6Q7Z4S9 175 aa13.8□□□□□ -0.2
CEACAM3-201ENST00000344550 PTH2Q96A98 100 aa13.8□□□□□ -0.2
CEACAM3-201ENST00000344550 TCEAL7Q9BRU2 100 aa13.8□□□□□ -0.2
CEACAM3-201ENST00000344550 F6UZH7 168 aa13.79□□□□□ -0.2
CEACAM3-201ENST00000344550 ARPC5O15511 151 aa13.79□□□□□ -0.2
CEACAM3-201ENST00000344550 GNRH2O43555 120 aa13.79□□□□□ -0.2
CEACAM3-201ENST00000344550 HIST1H2BAQ96A08 127 aa13.79□□□□□ -0.2
CEACAM3-201ENST00000344550 C8orf49Q96NF6 230 aa13.79□□□□□ -0.2
CEACAM3-201ENST00000344550 PKHD1P08F94 4074 aa13.79□□□□□ -0.2
CEACAM3-201ENST00000344550 C9JCJ5 164 aa13.78□□□□□ -0.2
CEACAM3-201ENST00000344550 SIVA1O15304 175 aa13.78□□□□□ -0.2
CEACAM3-201ENST00000344550 ZNF726P1Q15940 193 aa13.78□□□□□ -0.2
CEACAM3-201ENST00000344550 OR4C5Q8NGB2 326 aa13.78□□□□□ -0.2
CEACAM3-201ENST00000344550 PCNPQ8WW12 178 aaKnown RBP13.78□□□□□ -0.2
CEACAM3-201ENST00000344550 ZNF479Q96JC4 524 aa13.78□□□□□ -0.2
CEACAM3-201ENST00000344550 CYTL1Q9NRR1 136 aa13.78□□□□□ -0.2
CEACAM3-201ENST00000344550 HMSDA8MTL9 139 aa13.77□□□□□ -0.21
CEACAM3-201ENST00000344550 GCGP01275 180 aa13.77□□□□□ -0.21
CEACAM3-201ENST00000344550 LYPD5Q6UWN5 251 aa13.77□□□□□ -0.21
CEACAM3-201ENST00000344550 STOML3Q8TAV4 291 aa13.77□□□□□ -0.21
CEACAM3-201ENST00000344550 TXNDC17Q9BRA2 123 aa13.77□□□□□ -0.21
CEACAM3-201ENST00000344550 BOLA1Q9Y3E2 137 aa13.77□□□□□ -0.21
CEACAM3-201ENST00000344550 ARL2-SNX15V9GYD0 113 aa13.77□□□□□ -0.21
CEACAM3-201ENST00000344550 PKD1P98161 4303 aa13.76□□□□□ -0.21
CEACAM3-201ENST00000344550 IFNA7P01567 189 aa13.76□□□□□ -0.21
CEACAM3-201ENST00000344550 SRIP30626 198 aa13.76□□□□□ -0.21
CEACAM3-201ENST00000344550 FHITP49789 147 aa13.76□□□□□ -0.21
CEACAM3-201ENST00000344550 TNP2Q05952 138 aa13.76□□□□□ -0.21
CEACAM3-201ENST00000344550 PIK3CD-AS1Q5SR53 167 aa13.76□□□□□ -0.21
CEACAM3-201ENST00000344550 PRNTQ86SH4 94 aa13.76□□□□□ -0.21
CEACAM3-201ENST00000344550 KCNRGQ8N5I3 272 aa13.76□□□□□ -0.21
CEACAM3-201ENST00000344550 SGK494Q96LW2 274 aa13.76□□□□□ -0.21
CEACAM3-201ENST00000344550 FAM74A7A6NL05 159 aa13.75□□□□□ -0.21
CEACAM3-201ENST00000344550 K7EQD1 137 aa13.75□□□□□ -0.21
CEACAM3-201ENST00000344550 NXPH4O95158 308 aa13.75□□□□□ -0.21
CEACAM3-201ENST00000344550 SFTA3P0C7M3 94 aa13.75□□□□□ -0.21
CEACAM3-201ENST00000344550 ZNF80P51504 273 aaPredicted RBP13.75□□□□□ -0.21
CEACAM3-201ENST00000344550 KRTAP1-5Q9BYS1 174 aa13.75□□□□□ -0.21
CEACAM3-201ENST00000344550 TRAV9-2A0A087WT02 112 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 A0A0D9SG52 128 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 FABP5P3A8MUU1 101 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 UMAD1C9J7I0 102 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 SEC11BP0C7V7 166 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 TIRAPP58753 221 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 ZNF876PQ49A33 203 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 COX8CQ7Z4L0 72 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 C9orf85Q96MD7 179 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 ZFP30Q9Y2G7 519 aa13.74□□□□□ -0.21
CEACAM3-201ENST00000344550 MAP1LC3B2A6NCE7 125 aa13.73□□□□□ -0.21
CEACAM3-201ENST00000344550 PEX7O00628 323 aa13.73□□□□□ -0.21
CEACAM3-201ENST00000344550 GYPEP15421 78 aa13.73□□□□□ -0.21
CEACAM3-201ENST00000344550 MAP1LC3BQ9GZQ8 125 aa13.73□□□□□ -0.21
CEACAM3-201ENST00000344550 C11orf21Q9P2W6 132 aa13.73□□□□□ -0.21
CEACAM3-201ENST00000344550 HERC2O95714 4834 aa13.72□□□□□ -0.21
CEACAM3-201ENST00000344550 GATA1P15976 413 aaPredicted RBP13.72□□□□□ -0.21
CEACAM3-201ENST00000344550 EIF5AP63241 154 aaKnown RBP13.72□□□□□ -0.21
CEACAM3-201ENST00000344550 DNAH11Q96DT5 4516 aa13.71□□□□□ -0.21
CEACAM3-201ENST00000344550 TRBV6-1A0A0K0K1D8 114 aa13.71□□□□□ -0.21
CEACAM3-201ENST00000344550 TRBV6-4A0A1B0GX49 114 aa13.71□□□□□ -0.21
CEACAM3-201ENST00000344550 RS1O15537 224 aa13.71□□□□□ -0.21
CEACAM3-201ENST00000344550 DPPA3Q6W0C5 159 aa13.71□□□□□ -0.21
CEACAM3-201ENST00000344550 FMC1Q96HJ9 113 aa13.71□□□□□ -0.21
CEACAM3-201ENST00000344550 FGF8P55075 233 aaPredicted RBP13.7□□□□□ -0.22
CEACAM3-201ENST00000344550 UBE2G2P60604 165 aa13.7□□□□□ -0.22
CEACAM3-201ENST00000344550 NFE4Q86UQ8 179 aa13.7□□□□□ -0.22
CEACAM3-201ENST00000344550 LINC00479Q96M42 142 aa13.7□□□□□ -0.22
CEACAM3-201ENST00000344550 RNASE3P12724 160 aaKnown RBP13.69□□□□□ -0.22
CEACAM3-201ENST00000344550 DNLZQ5SXM8 178 aa13.69□□□□□ -0.22
CEACAM3-201ENST00000344550 CFAP126Q5VTH2 177 aa13.69□□□□□ -0.22
CEACAM3-201ENST00000344550 Q86TA4 180 aa13.69□□□□□ -0.22
CEACAM3-201ENST00000344550 MBD3L1Q8WWY6 194 aa13.69□□□□□ -0.22
CEACAM3-201ENST00000344550 PRADC1Q9BSG0 188 aa13.69□□□□□ -0.22
CEACAM3-201ENST00000344550 LY96Q9Y6Y9 160 aa13.69□□□□□ -0.22
CEACAM3-201ENST00000344550 KIAA1109Q2LD37 5005 aa13.68□□□□□ -0.22
CEACAM3-201ENST00000344550 TRAV34A0A0B4J273 112 aa13.68□□□□□ -0.22
CEACAM3-201ENST00000344550 KANTRA0A1W2PQU2 76 aa13.68□□□□□ -0.22
CEACAM3-201ENST00000344550 MGST1P10620 155 aaKnown RBP13.68□□□□□ -0.22
CEACAM3-201ENST00000344550 LINC00315P59091 139 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms