RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 H3BRN7 92 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 H3BTX0 84 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 NDUFA3O95167 84 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 PF4V1P10720 104 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 GRNP28799 593 aaKnown RBP6.35□□□□□ -1.39
ATG4A-201ENST00000343524 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 ZFP2Q6ZN57 461 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 KRTAP1-3Q8IUG1 177 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 C15orf53Q8NAA6 179 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 LEAP2Q969E1 77 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 IMUPQ9GZP8 106 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 ONECUT1Q9UBC0 465 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 SPTBN1Q01082 2364 aaKnown RBP6.35□□□□□ -1.39
ATG4A-201ENST00000343524 IGLV2-18A0A075B6J9 118 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 TRBV7-7A0A0K0K1E9 115 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 C9JAW5 83 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 H3BMM0 161 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 DUSP14O95147 198 aaKnown RBP6.35□□□□□ -1.39
ATG4A-201ENST00000343524 OR13C6PQ8NH95 151 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 FAM57AQ8TBR7 257 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 UBE2WQ96B02 151 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 TIMD4Q96H15 378 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 TMEM101Q96IK0 257 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 SRSF8Q9BRL6 282 aaKnown RBP6.35□□□□□ -1.39
ATG4A-201ENST00000343524 PRO1854Q9UHT4 67 aa6.35□□□□□ -1.39
ATG4A-201ENST00000343524 OTOGQ6ZRI0 2925 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 TMSB15BA0A087X1C1 80 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 PF4P02776 101 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 SLC25A45Q8N413 288 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 KRTAP4-12Q9BQ66 201 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 PRADC1Q9BSG0 188 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 SPRY4Q9C004 299 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 PPDPFQ9H3Y8 114 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 MRPL36Q9P0J6 103 aaKnown RBP6.34□□□□□ -1.39
ATG4A-201ENST00000343524 FZR1Q9UM11 496 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 SIGLEC9Q9Y336 463 aa6.34□□□□□ -1.39
ATG4A-201ENST00000343524 F8P00451 2351 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 TRAV25A0A0B4J276 109 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 PINLYPA6NC86 204 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 SMIM9A6NGZ8 99 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 CGB1A6NKQ9 187 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 ANXA2RQ3ZCQ2 193 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 IL17RELQ6ZVW7 336 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 ZNRF1Q8ND25 227 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 C8orf49Q96NF6 230 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 LINC01587Q99440 93 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 CABIN1Q9Y6J0 2220 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 M0R2P5 195 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 CRLF1O75462 422 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 IGKV3-15P01624 115 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 RPL27AP46776 148 aaKnown RBP6.33□□□□□ -1.4
ATG4A-201ENST00000343524 Q8N1Y9 231 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 C1orf162Q8NEQ5 155 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-201ENST00000343524 ODF3Q96PU9 254 aa6.33□□□□□ -1.4
ATG4A-201ENST00000343524 AKIRIN1Q9H9L7 192 aaPredicted RBP6.33□□□□□ -1.4
ATG4A-201ENST00000343524 A0A0B4J2C4 111 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 TRBV10-2A0A0K0K1G8 114 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 H3BT86 120 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 LGALS9O00182 355 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 TIMM23O14925 209 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 IGHV3-48P01763 117 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 ACYP1P07311 99 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 MAGEA5P43359 124 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 C9orf153Q5TBE3 101 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 C8orf31Q8N9H6 132 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 NTN5Q8WTR8 489 aaPredicted RBP6.32□□□□□ -1.4
ATG4A-201ENST00000343524 SCGB3A1Q96QR1 104 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 PRR25Q96S07 402 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 ZFHX3Q15911 3703 aa6.32□□□□□ -1.4
ATG4A-201ENST00000343524 ABCA2Q9BZC7 2435 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-201ENST00000343524 UQCRQO14949 82 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 NDUFA7O95182 113 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 EGR2P11161 476 aaPredicted RBP6.31□□□□□ -1.4
ATG4A-201ENST00000343524 COX6B1P14854 86 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 ATP5J2P56134 94 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
ATG4A-201ENST00000343524 GUSBP11Q6P575 273 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 NEXN-AS1Q8NBZ9 246 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 TOMM6Q96B49 74 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 TTTY12Q9BZ98 90 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 TLN1Q9Y490 2541 aaKnown RBP6.31□□□□□ -1.4
ATG4A-201ENST00000343524 E7EUB6 86 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 LINC01620Q4KN68 170 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 C10orf55Q5SWW7 151 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 DTX2Q86UW9 622 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 TMEM219Q86XT9 240 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 VKORC1Q9BQB6 163 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 SMIM2Q9BVW6 85 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 C21orf62Q9NYP8 219 aa6.31□□□□□ -1.4
ATG4A-201ENST00000343524 A0A0J9YY99 117 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 LHBP01229 141 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 IGLV2-23P01705 113 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 IGHV3-30P01768 117 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 ORM1P02763 201 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 CFC1BP0CG36 223 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 CFC1P0CG37 223 aa6.3□□□□□ -1.4
ATG4A-201ENST00000343524 IGHV3-30-5P0DP03 117 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms