RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 NUP35Q8NFH5 326 aa12.89□□□□□ -0.35
CLDN4-201ENST00000340958 PGLYRP4Q96LB8 373 aa12.89□□□□□ -0.35
CLDN4-201ENST00000340958 FAM19A4Q96LR4 140 aa12.89□□□□□ -0.35
CLDN4-201ENST00000340958 CMYA5Q8N3K9 4069 aa12.89□□□□□ -0.35
CLDN4-201ENST00000340958 HLA-DRB4P13762 266 aa12.88□□□□□ -0.35
CLDN4-201ENST00000340958 INSL3P51460 131 aa12.88□□□□□ -0.35
CLDN4-201ENST00000340958 PRR9Q5T870 116 aa12.88□□□□□ -0.35
CLDN4-201ENST00000340958 MRPL54Q6P161 138 aaKnown RBP12.88□□□□□ -0.35
CLDN4-201ENST00000340958 HLA-DRB4X5D2U9 266 aa12.88□□□□□ -0.35
CLDN4-201ENST00000340958 NBEAL1Q6ZS30 2694 aa12.88□□□□□ -0.35
CLDN4-201ENST00000340958 CRISP2P16562 243 aa12.88□□□□□ -0.35
CLDN4-201ENST00000340958 OR10D4PQ8NGN7 298 aa12.88□□□□□ -0.35
CLDN4-201ENST00000340958 BORCS7Q96B45 105 aa12.88□□□□□ -0.35
CLDN4-201ENST00000340958 ODF3Q96PU9 254 aa12.88□□□□□ -0.35
CLDN4-201ENST00000340958 FBN3Q75N90 2809 aa12.87□□□□□ -0.35
CLDN4-201ENST00000340958 FAM231BA6NCW3 169 aa12.87□□□□□ -0.35
CLDN4-201ENST00000340958 CDKN1BP46527 198 aa12.87□□□□□ -0.35
CLDN4-201ENST00000340958 RAB4BP61018 213 aa12.87□□□□□ -0.35
CLDN4-201ENST00000340958 SPINK13Q1W4C9 94 aa12.87□□□□□ -0.35
CLDN4-201ENST00000340958 GTSF1Q8WW33 167 aa12.87□□□□□ -0.35
CLDN4-201ENST00000340958 MCRIP2Q9BUT9 160 aaKnown RBP12.87□□□□□ -0.35
CLDN4-201ENST00000340958 SRD5A3Q9H8P0 318 aa12.87□□□□□ -0.35
CLDN4-201ENST00000340958 MGAM2Q2M2H8 2515 aa12.86□□□□□ -0.35
CLDN4-201ENST00000340958 H3BMM0 161 aa12.86□□□□□ -0.35
CLDN4-201ENST00000340958 M0R2Z0 102 aa12.86□□□□□ -0.35
CLDN4-201ENST00000340958 ODF3L2Q3SX64 289 aa12.86□□□□□ -0.35
CLDN4-201ENST00000340958 CDPF1Q6NVV7 123 aa12.86□□□□□ -0.35
CLDN4-201ENST00000340958 STHQ8IWL8 128 aa12.86□□□□□ -0.35
CLDN4-201ENST00000340958 GRIFINA4D1Z8 144 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 TYMSP04818 313 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 KIR3DS1Q14943 382 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 LINC01559Q495D7 138 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 Q6AWC8 147 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 TRAV12-2A0A075B6T6 113 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 KLLNB2CW77 178 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 FXYD7P58549 80 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 PRR31Q5SQ13 230 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 TRAPPC1Q9Y5R8 145 aa12.85□□□□□ -0.35
CLDN4-201ENST00000340958 TRAV12-3A0A0B4J271 114 aa12.84□□□□□ -0.35
CLDN4-201ENST00000340958 C7orf71A4D174 169 aa12.84□□□□□ -0.35
CLDN4-201ENST00000340958 SSTP61278 116 aa12.84□□□□□ -0.35
CLDN4-201ENST00000340958 MUC21Q5SSG8 566 aa12.84□□□□□ -0.35
CLDN4-201ENST00000340958 Q6ZQT7 251 aa12.84□□□□□ -0.35
CLDN4-201ENST00000340958 CD7P09564 240 aa12.83□□□□□ -0.35
CLDN4-201ENST00000340958 CAMPP49913 170 aa12.83□□□□□ -0.35
CLDN4-201ENST00000340958 WDR73Q6P4I2 378 aa12.83□□□□□ -0.35
CLDN4-201ENST00000340958 FER1L6-AS1Q8NA97 138 aa12.83□□□□□ -0.35
CLDN4-201ENST00000340958 SORL1Q92673 2214 aa12.83□□□□□ -0.36
CLDN4-201ENST00000340958 IGKV3D-20A0A0C4DH25 116 aa12.83□□□□□ -0.36
CLDN4-201ENST00000340958 BEAN1Q3B7T3 259 aa12.83□□□□□ -0.36
CLDN4-201ENST00000340958 COX19Q49B96 90 aa12.83□□□□□ -0.36
CLDN4-201ENST00000340958 PDZD11Q5EBL8 140 aa12.83□□□□□ -0.36
CLDN4-201ENST00000340958 FAM159AQ6UWV7 190 aa12.83□□□□□ -0.36
CLDN4-201ENST00000340958 GTSCR1Q86UQ5 136 aa12.83□□□□□ -0.36
CLDN4-201ENST00000340958 SNURFLB1AK76 121 aa12.82□□□□□ -0.36
CLDN4-201ENST00000340958 FABP4P15090 132 aa12.82□□□□□ -0.36
CLDN4-201ENST00000340958 FOXA3P55318 350 aaPredicted RBP12.82□□□□□ -0.36
CLDN4-201ENST00000340958 COA6Q5JTJ3 125 aaKnown RBP12.82□□□□□ -0.36
CLDN4-201ENST00000340958 LYZL1Q6UWQ5 148 aa12.82□□□□□ -0.36
CLDN4-201ENST00000340958 ATP5L2Q7Z4Y8 100 aa12.82□□□□□ -0.36
CLDN4-201ENST00000340958 HIST1H2BLQ99880 126 aa12.82□□□□□ -0.36
CLDN4-201ENST00000340958 C11orf21Q9P2W6 132 aa12.82□□□□□ -0.36
CLDN4-201ENST00000340958 A0A1B0GUT8 65 aa12.81□□□□□ -0.36
CLDN4-201ENST00000340958 S100A4P26447 101 aaKnown RBP12.81□□□□□ -0.36
CLDN4-201ENST00000340958 HBBP68871 147 aa12.81□□□□□ -0.36
CLDN4-201ENST00000340958 RIGQ13278 110 aa12.81□□□□□ -0.36
CLDN4-201ENST00000340958 AMTNQ6UX39 209 aa12.81□□□□□ -0.36
CLDN4-201ENST00000340958 TIMM8BQ9Y5J9 83 aaPredicted RBP12.81□□□□□ -0.36
CLDN4-201ENST00000340958 IGLL1P15814 213 aa12.81□□□□□ -0.36
CLDN4-201ENST00000340958 NUTF2P61970 127 aaKnown RBP12.81□□□□□ -0.36
CLDN4-201ENST00000340958 ANXA2RQ3ZCQ2 193 aa12.81□□□□□ -0.36
CLDN4-201ENST00000340958 GNB1LQ9BYB4 327 aa12.81□□□□□ -0.36
CLDN4-201ENST00000340958 MUC21A0A0G2JKD1 596 aa12.8□□□□□ -0.36
CLDN4-201ENST00000340958 MUC21A0A140T8X8 626 aa12.8□□□□□ -0.36
CLDN4-201ENST00000340958 FRMD6-AS1P0C7T7 363 aa12.8□□□□□ -0.36
CLDN4-201ENST00000340958 RASL11AQ6T310 242 aa12.8□□□□□ -0.36
CLDN4-201ENST00000340958 WFDC9Q8NEX5 89 aa12.8□□□□□ -0.36
CLDN4-201ENST00000340958 PACRGQ96M98 296 aaPredicted RBP12.8□□□□□ -0.36
CLDN4-201ENST00000340958 FAM110AQ9BQ89 295 aa12.8□□□□□ -0.36
CLDN4-201ENST00000340958 ARMS2P0C7Q2 107 aa12.79□□□□□ -0.36
CLDN4-201ENST00000340958 ASIPP42127 132 aa12.79□□□□□ -0.36
CLDN4-201ENST00000340958 KCNS1Q96KK3 526 aa12.79□□□□□ -0.36
CLDN4-201ENST00000340958 MRPL18Q9H0U6 180 aaKnown RBP12.79□□□□□ -0.36
CLDN4-201ENST00000340958 AGRNO00468 2067 aa12.79□□□□□ -0.36
CLDN4-201ENST00000340958 RBMY1BA6NDE4 496 aaKnown RBP12.78□□□□□ -0.36
CLDN4-201ENST00000340958 RBMY1EA6NEQ0 496 aaKnown RBP12.78□□□□□ -0.36
CLDN4-201ENST00000340958 MT-ND6P03923 174 aa12.78□□□□□ -0.36
CLDN4-201ENST00000340958 RBMY1DP0C7P1 496 aaKnown RBP12.78□□□□□ -0.36
CLDN4-201ENST00000340958 WFDC10AQ9H1F0 79 aa12.78□□□□□ -0.36
CLDN4-201ENST00000340958 F2Z2F3 143 aa12.78□□□□□ -0.36
CLDN4-201ENST00000340958 HLA-DQA1P01909 254 aa12.78□□□□□ -0.36
CLDN4-201ENST00000340958 TWIST1Q15672 202 aa12.78□□□□□ -0.36
CLDN4-201ENST00000340958 A8MTW9 85 aa12.77□□□□□ -0.37
CLDN4-201ENST00000340958 ZNF324O75467 553 aaPredicted RBP12.77□□□□□ -0.37
CLDN4-201ENST00000340958 IGLC6P0CF74 106 aa12.77□□□□□ -0.37
CLDN4-201ENST00000340958 TMEM136Q6ZRR5 245 aa12.77□□□□□ -0.37
CLDN4-201ENST00000340958 TRPT1Q86TN4 253 aaKnown RBP12.77□□□□□ -0.37
CLDN4-201ENST00000340958 A0A1B0GW15 77 aa12.76□□□□□ -0.37
CLDN4-201ENST00000340958 H3BVH4 76 aa12.76□□□□□ -0.37
CLDN4-201ENST00000340958 GNRH2O43555 120 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms