RNA–Protein interactions for RNA: ENST00000340840.6

TRERF1-201, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-201ENST00000340840 TRBV7-1A0A0A6YYK4 115 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 ZNF815PA8K554 130 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 PAPPA-AS1Q5QFB9 102 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 SMIM2Q9BVW6 85 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 DPH3P1Q9H4G8 78 aa7.32□□□□□ -1.24
TRERF1-201ENST00000340840 TRAV26-2A0A0B4J265 109 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 NDPQ00604 133 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 PAX8Q06710 450 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 PRAC2D3DTV9 90 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 ATP6V0E1O15342 81 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 BUB3O43684 328 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 EFNA4P52798 201 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 C8orf86Q6ZUL3 223 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 LY6G5BQ8NDX9 201 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 KIR2DL4Q99706 377 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 IGHV7-81A0A0B4J1V7 117 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 OVOL1O14753 267 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 C12orf74Q32Q52 190 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 C1orf122Q6ZSJ8 110 aa7.31□□□□□ -1.24
TRERF1-201ENST00000340840 SUMO2P61956 95 aaKnown RBP7.3□□□□□ -1.24
TRERF1-201ENST00000340840 ETDBQ3ZM63 59 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 PIFOQ8TCI5 191 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 MRPL53Q96EL3 112 aaKnown RBP7.3□□□□□ -1.24
TRERF1-201ENST00000340840 LINC00477Q96M19 166 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 IGLL5B9A064 214 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 RNF185Q96GF1 192 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 YAE1D1Q9NRH1 226 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 MYO15AQ9UKN7 3530 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 IGKV2D-26A0A0A0MRZ7 120 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 LINC01549A6NIU2 74 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 APOMO95445 188 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 TSSC4Q9Y5U2 329 aaPredicted RBP7.3□□□□□ -1.24
TRERF1-201ENST00000340840 MYMXA0A1B0GTQ4 84 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 COX8CQ7Z4L0 72 aa7.3□□□□□ -1.24
TRERF1-201ENST00000340840 H3BMG7 143 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 HLA-DRB4P13762 266 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 RNASE4P34096 147 aaKnown RBP7.29□□□□□ -1.24
TRERF1-201ENST00000340840 PSMB2P49721 201 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 Q1RN00 199 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 CD300EQ496F6 205 aaPredicted RBP7.29□□□□□ -1.24
TRERF1-201ENST00000340840 C14orf178Q8N769 122 aaPredicted RBP7.29□□□□□ -1.24
TRERF1-201ENST00000340840 HLA-DRB4X5D2U9 266 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 PF4V1P10720 104 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 ID1P41134 155 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 FAM159AQ6UWV7 190 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 FOXI2Q6ZQN5 318 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 PGPEP1Q9NXJ5 209 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 COL27A1Q8IZC6 1860 aaPredicted RBP7.29□□□□□ -1.24
TRERF1-201ENST00000340840 RRN3P1Q2M238 152 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 TMEM170BQ5T4T1 132 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 C2orf66Q6UXQ4 117 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 TM2D2Q9BX73 214 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 CNFNQ9BYD5 112 aa7.29□□□□□ -1.24
TRERF1-201ENST00000340840 ODF3BA8MYP8 253 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 G3V318 75 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 FOXE3Q13461 319 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 NEGR1Q7Z3B1 354 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 DLX4Q92988 240 aaPredicted RBP7.28□□□□□ -1.24
TRERF1-201ENST00000340840 TRAV41A0A0B4J266 112 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 NDUFS8O00217 210 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 LGALS3P17931 250 aaKnown RBP7.28□□□□□ -1.24
TRERF1-201ENST00000340840 UBE2E1P51965 193 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 ZNF418Q8TF45 676 aaPredicted RBP7.28□□□□□ -1.24
TRERF1-201ENST00000340840 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 LENEPQ9Y5L5 61 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 SMAD5-AS1Q9Y6J3 95 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 GAGE12HA6NDE8 117 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 SAA4P35542 130 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 AMTNQ6UX39 209 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 Q8N9W7 124 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 Q8NA96 180 aa7.28□□□□□ -1.24
TRERF1-201ENST00000340840 IGKV3D-20A0A0C4DH25 116 aa7.27□□□□□ -1.24
TRERF1-201ENST00000340840 SLC25A16P16260 332 aa7.27□□□□□ -1.24
TRERF1-201ENST00000340840 AZU1P20160 251 aa7.27□□□□□ -1.24
TRERF1-201ENST00000340840 KHDC1LQ5JSQ8 128 aa7.27□□□□□ -1.24
TRERF1-201ENST00000340840 SFTA2Q6UW10 78 aa7.27□□□□□ -1.24
TRERF1-201ENST00000340840 PRADC1Q9BSG0 188 aa7.27□□□□□ -1.24
TRERF1-201ENST00000340840 DSPP15924 2871 aaKnown RBP7.27□□□□□ -1.24
TRERF1-201ENST00000340840 ARHGAP32A7KAX9 2087 aa7.27□□□□□ -1.25
TRERF1-201ENST00000340840 K7EMI3 77 aa7.27□□□□□ -1.25
TRERF1-201ENST00000340840 FREM2Q5SZK8 3169 aa7.27□□□□□ -1.25
TRERF1-201ENST00000340840 WFDC2Q14508 124 aa7.27□□□□□ -1.25
TRERF1-201ENST00000340840 GLMPQ8WWB7 406 aa7.27□□□□□ -1.25
TRERF1-201ENST00000340840 MOB4Q9Y3A3 225 aa7.27□□□□□ -1.25
TRERF1-201ENST00000340840 TRAV12-1A0A0B4J245 112 aa7.27□□□□□ -1.25
TRERF1-201ENST00000340840 GRNP28799 593 aaKnown RBP7.27□□□□□ -1.25
TRERF1-201ENST00000340840 LINC00527Q9UJ94 153 aa7.27□□□□□ -1.25
TRERF1-201ENST00000340840 HELZ2Q9BYK8 2649 aaKnown RBP7.26□□□□□ -1.25
TRERF1-201ENST00000340840 MTURNQ8N3F0 131 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 SYT8Q8NBV8 401 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 HHLA3Q9XRX5 114 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 FAM223BA6NKX1 122 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 E9PLD3 99 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 SCGB1A1P11684 91 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 C9orf47Q6ZRZ4 202 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 FAM223AQ8IWN6 122 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 USP9XQ93008 2570 aaPredicted RBP7.26□□□□□ -1.25
TRERF1-201ENST00000340840 IGHV3OR16-10A0A075B7F0 116 aa7.26□□□□□ -1.25
TRERF1-201ENST00000340840 NPFFO15130 113 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms