RNA–Protein interactions for RNA: ENST00000340457.8

UPK3BL1-201, Transcript of uroplakin 3B like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPK3BL1, Length 1,342 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1-201ENST00000340457 TMEM256Q8N2U0 113 aa9.55□□□□□ -0.88
UPK3BL1-201ENST00000340457 CYB561D1Q8N8Q1 229 aa9.55□□□□□ -0.88
UPK3BL1-201ENST00000340457 CMTM2Q8TAZ6 248 aa9.55□□□□□ -0.88
UPK3BL1-201ENST00000340457 C11orf52Q96A22 123 aa9.55□□□□□ -0.88
UPK3BL1-201ENST00000340457 ZNF586Q9NXT0 402 aa9.55□□□□□ -0.88
UPK3BL1-201ENST00000340457 FAT1Q14517 4588 aa9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 H3BQ15 152 aa9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 SLC25A5P05141 298 aaKnown RBP9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 HOXA5P20719 270 aa9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 AKR1C3P42330 323 aa9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 RANP62826 216 aaKnown RBP9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 PSG3Q16557 428 aa9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 TTC32Q5I0X7 151 aa9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 RNASE8Q8TDE3 154 aaKnown RBP9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 HIST1H2BAQ96A08 127 aa9.54□□□□□ -0.88
UPK3BL1-201ENST00000340457 FLG2Q5D862 2391 aaPredicted RBP9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 SCO2A0A1W2PP80 73 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 GAGE12BA1L429 117 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 EPM2AB3EWF7 344 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 K7EQM0 130 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 GAGE7O76087 117 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 GAGE12FP0CL80 117 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 GAGE12GP0CL81 117 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 GAGE12IP0CL82 117 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 CSN1S1P47710 185 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 SUMO1P63165 101 aaKnown RBP9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 FAM74A3Q4VXF1 159 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 ARL6IP6Q8N6S5 226 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 TMEM263Q8WUH6 116 aaKnown RBP9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 PRELID1Q9Y255 219 aa9.53□□□□□ -0.88
UPK3BL1-201ENST00000340457 SRRM2Q9UQ35 2752 aaKnown RBP9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 SERTM2A0A1B0GWG4 89 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 PGPA6NDG6 321 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 H3BTX0 84 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 SLC17A3O00476 420 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 PEX7O00628 323 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 CDKN1BP46527 198 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 ZNF493Q6ZR52 646 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 CCDC28AQ8IWP9 274 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 OR10J6PQ8NGY7 276 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 SMIM7Q9BQ49 75 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 PARLQ9H300 379 aa9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 ZNF331Q9NQX6 463 aaPredicted RBP9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 CARHSP1Q9Y2V2 147 aaKnown RBP9.52□□□□□ -0.89
UPK3BL1-201ENST00000340457 ZNF727A8MUV8 499 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 C9JQL5 133 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 J3KRW8 73 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 NDUFB4O95168 129 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 ADCYAP1P18509 176 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 BTF3P20290 206 aaKnown RBP9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 LINC00315P59091 139 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 UBE2G1P62253 170 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 ZNF674Q2M3X9 581 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 SVBPQ8N300 66 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 MRPL53Q96EL3 112 aaKnown RBP9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 RPH3ALQ9UNE2 315 aa9.51□□□□□ -0.89
UPK3BL1-201ENST00000340457 MYCBP2O75592 4640 aa9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 H7BYZ3 331 aa9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 S100A9P06702 114 aaKnown RBP9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 INAFM2P0DMQ5 153 aa9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 PNRC1Q12796 327 aaPredicted RBP9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 C10orf91Q5T1B1 145 aa9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 EXOC3-AS1Q8N2X6 119 aa9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 LINC00612Q8N6U2 182 aa9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 UPK3BQ9BT76 320 aa9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 EPDR1Q9UM22 224 aa9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 MRPS16Q9Y3D3 137 aaKnown RBP9.5□□□□□ -0.89
UPK3BL1-201ENST00000340457 FBLL1A6NHQ2 334 aaKnown RBP9.49□□□□□ -0.89
UPK3BL1-201ENST00000340457 PRAC2D3DTV9 90 aa9.49□□□□□ -0.89
UPK3BL1-201ENST00000340457 SNAPINO95295 136 aa9.49□□□□□ -0.89
UPK3BL1-201ENST00000340457 APOC3P02656 99 aa9.49□□□□□ -0.89
UPK3BL1-201ENST00000340457 TCRAP04437 139 aa9.49□□□□□ -0.89
UPK3BL1-201ENST00000340457 GFI1BQ5VTD9 330 aa9.49□□□□□ -0.89
UPK3BL1-201ENST00000340457 FMC1Q96HJ9 113 aa9.49□□□□□ -0.89
UPK3BL1-201ENST00000340457 NAT8Q9UHE5 227 aa9.49□□□□□ -0.89
UPK3BL1-201ENST00000340457 A0A1W2PPQ1 181 aa9.48□□□□□ -0.89
UPK3BL1-201ENST00000340457 C9JCJ5 164 aa9.48□□□□□ -0.89
UPK3BL1-201ENST00000340457 RPL35P42766 123 aaKnown RBP9.48□□□□□ -0.89
UPK3BL1-201ENST00000340457 GNG5P63218 68 aa9.48□□□□□ -0.89
UPK3BL1-201ENST00000340457 Q6ZRN7 208 aaPredicted RBP9.48□□□□□ -0.89
UPK3BL1-201ENST00000340457 Q6ZTI0 123 aa9.48□□□□□ -0.89
UPK3BL1-201ENST00000340457 TMEM75Q8N9X5 138 aa9.48□□□□□ -0.89
UPK3BL1-201ENST00000340457 TNFRSF18Q9Y5U5 241 aa9.48□□□□□ -0.89
UPK3BL1-201ENST00000340457 SNURFLB1AK76 121 aa9.47□□□□□ -0.89
UPK3BL1-201ENST00000340457 GNG4P50150 75 aa9.47□□□□□ -0.89
UPK3BL1-201ENST00000340457 XGP55808 180 aa9.47□□□□□ -0.89
UPK3BL1-201ENST00000340457 TVP23CQ96ET8 276 aa9.47□□□□□ -0.89
UPK3BL1-201ENST00000340457 SMIM12Q96EX1 92 aa9.47□□□□□ -0.89
UPK3BL1-201ENST00000340457 VSIG2Q96IQ7 327 aa9.47□□□□□ -0.89
UPK3BL1-201ENST00000340457 A0A096LPF7 62 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 TRAV12-3A0A0B4J271 114 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 DIRC3C9JPN6 131 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 M0R036 132 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 M0R3E3 92 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 TMEM183BQ1AE95 376 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 CENPWQ5EE01 88 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 GOLT1AQ6ZVE7 132 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 DERL1Q9BUN8 251 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 LY96Q9Y6Y9 160 aa9.46□□□□□ -0.9
UPK3BL1-201ENST00000340457 VPS13BQ7Z7G8 4022 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms