RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 IGKV3OR2-268A0A0C4DH90 116 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 TCL1BO95988 128 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 GP9P14770 177 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 NANOS3P60323 173 aaKnown RBP2.65□□□□□ -1.99
CSMD3-202ENST00000339701 MST1LQ2TV78 715 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 HIGD2BQ4VC39 106 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 PRR30Q53SZ7 412 aaPredicted RBP2.65□□□□□ -1.99
CSMD3-202ENST00000339701 C10orf91Q5T1B1 145 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 LHFPL6Q9Y693 200 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 A0A1B0GVG6 124 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 PEBP1P30086 187 aaKnown RBP2.65□□□□□ -1.99
CSMD3-202ENST00000339701 ARTNQ5T4W7 220 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 C9JAW5 83 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 FOXS1O43638 330 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV1-69P01742 117 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 P0DMU3 169 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 FAM231AP0DMU4 169 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 FAM231CP0DMU5 169 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 PYYP10082 97 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 SPATA3Q8NHX4 192 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV2-70DA0A0C4DH43 119 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 ELANEP08246 267 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV1-2P23083 117 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 PRSS41Q7RTY9 318 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 LINC01548A6NM66 108 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 K7EP34 96 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 hDV102S1A0JD36 115 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 SPART-AS1P0CW21 52 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 SAA4P35542 130 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 INSL4Q14641 139 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 BRD3OSQ6XYD6 125 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 ANKRD11Q6UB99 2663 aaPredicted RBP2.64□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV3-43A0A0B4J1X8 118 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV3-43DP0DP04 118 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 FAM222AQ5U5X8 452 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 FAM104BQ5XKR9 115 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 ZNF329Q86UD4 541 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 Q8NA96 180 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 SPRR3Q9UBC9 169 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 U3KQK5 164 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 TRAV4A0A0B4J268 109 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 A0A1W2PPM0 123 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 UBE2D1P51668 147 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 UBE2E1P51965 193 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 ZC2HC1BQ5TFG8 222 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 CLEC19AQ6UXS0 136 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 ZCCHC24Q8N2G6 241 aaKnown RBP2.64□□□□□ -1.99
CSMD3-202ENST00000339701 LYZL4Q96KX0 146 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 COLCA2A8K830 154 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 IGLL5B9A064 214 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 BUB3O43684 328 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 TIMM17BO60830 172 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 BRI3O95415 125 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 CD7P09564 240 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 CBLN3Q6UW01 205 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 C5orf47Q569G3 176 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 ZNF250P15622 560 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 KIR3DS1Q14943 382 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 SPACA5Q96QH8 159 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 RNF224P0DH78 156 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 HIST1H4AP62805 103 aaKnown RBP2.64□□□□□ -1.99
CSMD3-202ENST00000339701 GUSBP1Q15486 140 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 CDPF1Q6NVV7 123 aa2.64□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV2-26A0A0B4J1V2 119 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 A0A0U1RQV1 116 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 CGB1A6NKQ9 187 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 DEFB125Q8N687 156 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 LYPD6BQ8NI32 183 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 C11orf45Q8TAV5 145 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 A0A0B4J2C4 111 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 K7EN84 100 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 SYNJ2BPP57105 145 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 WDR86Q86TI4 376 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 GVQW1Q8N7I0 195 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 RBM3P98179 157 aaKnown RBP2.63□□□□□ -1.99
CSMD3-202ENST00000339701 ETDBQ3ZM63 59 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 SLC25A29Q8N8R3 303 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 THAP8Q8NA92 274 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV3-72A0A0B4J1Y9 119 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 C12orf77C9JDV5 145 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 FAM229AH3BQW9 127 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV3-11P01762 117 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 DIAPH2-AS1Q14236 149 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 TEX36Q5VZQ5 186 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 DUX4L9Q6RFH8 374 aaPredicted RBP2.63□□□□□ -1.99
CSMD3-202ENST00000339701 ADAMTSL5Q6ZMM2 481 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 TMEM14BQ9NUH8 114 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 DAND5Q8N907 189 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 EP400Q96L91 3159 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 H7C2G1 150 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 M0QXV9 152 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 CT62P0C5K7 136 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 LINC00158P58513 81 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 TPRX1Q8N7U7 411 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 SMIM9A6NGZ8 99 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 C15orf62A8K5M9 175 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 PATE4P0C8F1 98 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 IGLC2P0DOY2 106 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 IGLC3P0DOY3 106 aa2.63□□□□□ -1.99
CSMD3-202ENST00000339701 FOXL2P58012 376 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms