RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 IGFL4Q6B9Z1 124 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 Q6ZS52 159 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 GGNQ86UU5 652 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 CD177Q8N6Q3 437 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 C2orf48Q96LS8 159 aa7.45□□□□□ -1.22
PTCHD4-201ENST00000339488 CADP27708 2225 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 TRBV10-2A0A0K0K1G8 114 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 H7C423 109 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 TRIAP1O43715 76 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 TRACP01848 142 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 Q8IYB0 196 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 ZNRF1Q8ND25 227 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 ZNRF2Q8NHG8 242 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 TPSG1Q9NRR2 321 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 SSUH2Q9Y2M2 353 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 IGLV2-18A0A075B6J9 118 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 IGHV3-64A0A075B6Q5 118 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 FAM236DA0A1B0GTK5 79 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 ORM1P02763 201 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 FAM236CP0DP71 79 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 LAGE3Q14657 143 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 WFDC11Q8NEX6 87 aa7.44□□□□□ -1.22
PTCHD4-201ENST00000339488 SPTY2D1-AS1A0A0U1RR47 76 aa7.43□□□□□ -1.22
PTCHD4-201ENST00000339488 RPS28P62857 69 aaKnown RBP7.43□□□□□ -1.22
PTCHD4-201ENST00000339488 MBD3L2Q8NHZ7 208 aaPredicted RBP7.43□□□□□ -1.22
PTCHD4-201ENST00000339488 SCGB3A1Q96QR1 104 aa7.43□□□□□ -1.22
PTCHD4-201ENST00000339488 METTL26Q96S19 204 aa7.43□□□□□ -1.22
PTCHD4-201ENST00000339488 TRAV13-1A0A0B4J241 112 aa7.43□□□□□ -1.22
PTCHD4-201ENST00000339488 TNFRSF4P43489 277 aa7.43□□□□□ -1.22
PTCHD4-201ENST00000339488 CIRBPQ14011 172 aaKnown RBP7.43□□□□□ -1.22
PTCHD4-201ENST00000339488 KLF14Q8TD94 323 aaPredicted RBP7.43□□□□□ -1.22
PTCHD4-201ENST00000339488 MAGEA5P43359 124 aa7.42□□□□□ -1.22
PTCHD4-201ENST00000339488 ERHP84090 104 aaKnown RBP7.42□□□□□ -1.22
PTCHD4-201ENST00000339488 SLC25A39Q9BZJ4 359 aaPredicted RBP7.42□□□□□ -1.22
PTCHD4-201ENST00000339488 NXPH1P58417 271 aa7.42□□□□□ -1.22
PTCHD4-201ENST00000339488 CGB1A6NKQ9 187 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 HOXB4P17483 251 aaPredicted RBP7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 MALP21145 153 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 NPC2P61916 151 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 TMEM263Q8WUH6 116 aaKnown RBP7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 C11orf86A6NJI1 115 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 DKK1O94907 266 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 CRYGAP11844 174 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 PFN2P35080 140 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 KLRB1Q12918 225 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 NRACQ8N912 160 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 ZZEF1O43149 2961 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 TRAV8-3A0A0A6YYJ7 113 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 TRAV12-3A0A0B4J271 114 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 A0A0G2JNJ9 132 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 IGHV4-34P06331 123 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 B3GALT5-AS1P59052 145 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 FAM201AQ5SY85 155 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 Q9UFV3 132 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 PRO0628Q9UI54 55 aa7.41□□□□□ -1.22
PTCHD4-201ENST00000339488 RHOHQ15669 191 aa7.4□□□□□ -1.22
PTCHD4-201ENST00000339488 Q6ZT83 130 aa7.4□□□□□ -1.22
PTCHD4-201ENST00000339488 ZCCHC24Q8N2G6 241 aaKnown RBP7.4□□□□□ -1.22
PTCHD4-201ENST00000339488 NDUFA4L2Q9NRX3 87 aa7.4□□□□□ -1.22
PTCHD4-201ENST00000339488 SIT1Q9Y3P8 196 aa7.4□□□□□ -1.22
PTCHD4-201ENST00000339488 ZNF575Q86XF7 245 aa7.4□□□□□ -1.23
PTCHD4-201ENST00000339488 MUSTN1Q8IVN3 82 aa7.4□□□□□ -1.23
PTCHD4-201ENST00000339488 S4R3C0 116 aa7.4□□□□□ -1.23
PTCHD4-201ENST00000339488 DMXL2Q8TDJ6 3036 aa7.4□□□□□ -1.23
PTCHD4-201ENST00000339488 CACNA1HO95180 2353 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 LINC01546A6NGU7 62 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 COX6A1P12074 109 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 THAP8Q8NA92 274 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 NEXN-AS1Q8NBZ9 246 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 GPR179Q6PRD1 2367 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 RELNP78509 3460 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 ADARB2-AS1A8MUL3 147 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 CD40P25942 277 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 ZNF415Q09FC8 603 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 ARHGAP32A7KAX9 2087 aa7.39□□□□□ -1.23
PTCHD4-201ENST00000339488 CEP250Q9BV73 2442 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 A0A087WVE0 104 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 J3QQQ9 107 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 CRYGDP07320 174 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 GUSBP11Q6P575 273 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 TMEM86BQ8N661 226 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 TRBV19A0A075B6N1 114 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 NTN3O00634 580 aaPredicted RBP7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 UBE2E1P51965 193 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 MRPS21P82921 87 aaKnown RBP7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 SDIM1Q6ZPB5 146 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 NACAE9PAV3 2078 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 AVPP01185 164 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 IGHG3P01860 377 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 SLC25A29Q8N8R3 303 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 ZNF580Q9UK33 172 aa7.38□□□□□ -1.23
PTCHD4-201ENST00000339488 DSCAMO60469 2012 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 IGKV1D-17A0A075B6S4 117 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 P0DMU3 169 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 FAM231AP0DMU4 169 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 FAM231CP0DMU5 169 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 C8orf31Q8N9H6 132 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 TACC2O95359 2948 aa7.37□□□□□ -1.23
PTCHD4-201ENST00000339488 MED13Q9UHV7 2174 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms