RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 NXT2Q9NPJ8 142 aaKnown RBP14.47□□□□□ -0.09
PSPC1-201ENST00000338910 PTPN13Q12923 2485 aa14.47□□□□□ -0.09
PSPC1-201ENST00000338910 ANKRD17O75179 2603 aaKnown RBP14.47□□□□□ -0.09
PSPC1-201ENST00000338910 USP9YO00507 2555 aaPredicted RBP14.47□□□□□ -0.09
PSPC1-201ENST00000338910 IGHV4-30-2A0A087WSY4 118 aa14.47□□□□□ -0.09
PSPC1-201ENST00000338910 K7EMI3 77 aa14.47□□□□□ -0.09
PSPC1-201ENST00000338910 LINC01559Q495D7 138 aa14.47□□□□□ -0.09
PSPC1-201ENST00000338910 PSMG3-AS1Q96PY0 264 aa14.47□□□□□ -0.09
PSPC1-201ENST00000338910 CNFNQ9BYD5 112 aa14.47□□□□□ -0.09
PSPC1-201ENST00000338910 ZNF207O43670 478 aaKnown RBP14.46□□□□□ -0.09
PSPC1-201ENST00000338910 DPM2O94777 84 aa14.46□□□□□ -0.09
PSPC1-201ENST00000338910 MFAP4P55083 255 aa14.46□□□□□ -0.09
PSPC1-201ENST00000338910 FOXC2Q99958 501 aa14.46□□□□□ -0.09
PSPC1-201ENST00000338910 A0A1B0GV72 72 aa14.46□□□□□ -0.09
PSPC1-201ENST00000338910 TNFRSF6BO95407 300 aa14.46□□□□□ -0.09
PSPC1-201ENST00000338910 ZNF479Q96JC4 524 aa14.46□□□□□ -0.09
PSPC1-201ENST00000338910 ATP6V0BQ99437 205 aa14.46□□□□□ -0.09
PSPC1-201ENST00000338910 ABCA12Q86UK0 2595 aa14.45□□□□□ -0.1
PSPC1-201ENST00000338910 WFDC12Q8WWY7 111 aa14.45□□□□□ -0.1
PSPC1-201ENST00000338910 SPAG8Q99932 426 aaPredicted RBP14.45□□□□□ -0.1
PSPC1-201ENST00000338910 C21orf62Q9NYP8 219 aa14.45□□□□□ -0.1
PSPC1-201ENST00000338910 F8W735 103 aaPredicted RBP14.45□□□□□ -0.1
PSPC1-201ENST00000338910 ATP5LO75964 103 aa14.45□□□□□ -0.1
PSPC1-201ENST00000338910 Q8TAT8 98 aa14.45□□□□□ -0.1
PSPC1-201ENST00000338910 H3BMG7 143 aa14.44□□□□□ -0.1
PSPC1-201ENST00000338910 ETDBQ3ZM63 59 aa14.44□□□□□ -0.1
PSPC1-201ENST00000338910 SH2D6Q7Z4S9 175 aa14.44□□□□□ -0.1
PSPC1-201ENST00000338910 TAL2Q16559 108 aa14.44□□□□□ -0.1
PSPC1-201ENST00000338910 ECSCRQ19T08 205 aa14.44□□□□□ -0.1
PSPC1-201ENST00000338910 BRD3OSQ6XYD6 125 aa14.44□□□□□ -0.1
PSPC1-201ENST00000338910 MAPKAPK5-AS1Q8N8E1 139 aa14.44□□□□□ -0.1
PSPC1-201ENST00000338910 TMEM158Q8WZ71 300 aa14.44□□□□□ -0.1
PSPC1-201ENST00000338910 LINC01548A6NM66 108 aa14.43□□□□□ -0.1
PSPC1-201ENST00000338910 C12orf74Q32Q52 190 aa14.43□□□□□ -0.1
PSPC1-201ENST00000338910 AGRNO00468 2067 aa14.43□□□□□ -0.1
PSPC1-201ENST00000338910 COX6B1P14854 86 aa14.43□□□□□ -0.1
PSPC1-201ENST00000338910 SRSF2Q01130 221 aaKnown RBP14.43□□□□□ -0.1
PSPC1-201ENST00000338910 S100A7AQ86SG5 101 aa14.43□□□□□ -0.1
PSPC1-201ENST00000338910 ATP6V0E1O15342 81 aa14.42□□□□□ -0.1
PSPC1-201ENST00000338910 TMEM219Q86XT9 240 aa14.42□□□□□ -0.1
PSPC1-201ENST00000338910 PRO0461Q9UI25 63 aa14.42□□□□□ -0.1
PSPC1-201ENST00000338910 IGLV2-18A0A075B6J9 118 aa14.42□□□□□ -0.1
PSPC1-201ENST00000338910 TRAV40A0A0B4J280 105 aa14.42□□□□□ -0.1
PSPC1-201ENST00000338910 GATA1P15976 413 aaPredicted RBP14.42□□□□□ -0.1
PSPC1-201ENST00000338910 TMEM160Q9NX00 188 aa14.42□□□□□ -0.1
PSPC1-201ENST00000338910 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.41□□□□□ -0.1
PSPC1-201ENST00000338910 MRPL35Q9NZE8 188 aaKnown RBP14.41□□□□□ -0.1
PSPC1-201ENST00000338910 IGHV3-35A0A0C4DH35 117 aa14.41□□□□□ -0.1
PSPC1-201ENST00000338910 Q5PR19 223 aa14.41□□□□□ -0.1
PSPC1-201ENST00000338910 AMTNQ6UX39 209 aa14.41□□□□□ -0.1
PSPC1-201ENST00000338910 Q8N8P6 123 aa14.41□□□□□ -0.1
PSPC1-201ENST00000338910 ZNF502Q8TBZ5 544 aa14.41□□□□□ -0.1
PSPC1-201ENST00000338910 G3V318 75 aa14.4□□□□□ -0.1
PSPC1-201ENST00000338910 ORM1P02763 201 aa14.4□□□□□ -0.1
PSPC1-201ENST00000338910 IGHG4P01861 327 aa14.4□□□□□ -0.1
PSPC1-201ENST00000338910 CTSGP08311 255 aa14.4□□□□□ -0.1
PSPC1-201ENST00000338910 GAGE13Q4V321 117 aa14.4□□□□□ -0.1
PSPC1-201ENST00000338910 ZNF48Q96MX3 618 aaPredicted RBP14.4□□□□□ -0.1
PSPC1-201ENST00000338910 IGHV3OR16-8A0A075B7F1 116 aa14.39□□□□□ -0.11
PSPC1-201ENST00000338910 IGHV1-69DA0A0B4J2H0 117 aa14.39□□□□□ -0.11
PSPC1-201ENST00000338910 IGHV1-69P01742 117 aa14.39□□□□□ -0.11
PSPC1-201ENST00000338910 RRN3P1Q2M238 152 aa14.39□□□□□ -0.11
PSPC1-201ENST00000338910 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.39□□□□□ -0.111e-9■■□□□ 14.2
PSPC1-201ENST00000338910 ZANQ9Y493 2812 aa14.39□□□□□ -0.11
PSPC1-201ENST00000338910 RPL7P18124 248 aaKnown RBP14.39□□□□□ -0.11
PSPC1-201ENST00000338910 C15orf32Q32M92 178 aa14.39□□□□□ -0.11
PSPC1-201ENST00000338910 INSL3P51460 131 aa14.38□□□□□ -0.11
PSPC1-201ENST00000338910 SCGB2A2Q13296 93 aa14.38□□□□□ -0.11
PSPC1-201ENST00000338910 FAM110DQ8TAY7 271 aaPredicted RBP14.37□□□□□ -0.11
PSPC1-201ENST00000338910 NAV2Q8IVL1 2488 aa14.37□□□□□ -0.11
PSPC1-201ENST00000338910 TRBV7-3A0A075B6L6 115 aa14.37□□□□□ -0.11
PSPC1-201ENST00000338910 A0A1B0GWB2 263 aa14.37□□□□□ -0.11
PSPC1-201ENST00000338910 FABP5P3A8MUU1 101 aa14.37□□□□□ -0.11
PSPC1-201ENST00000338910 IGHV4-38-2P0DP08 117 aa14.37□□□□□ -0.11
PSPC1-201ENST00000338910 TCTEX1D4Q5JR98 221 aa14.37□□□□□ -0.11
PSPC1-201ENST00000338910 MTURNQ8N3F0 131 aa14.37□□□□□ -0.11
PSPC1-201ENST00000338910 C5orf56Q8N8D9 126 aa14.37□□□□□ -0.11
PSPC1-201ENST00000338910 HLA-DMBP28068 263 aa14.36□□□□□ -0.11
PSPC1-201ENST00000338910 RAB9AP51151 201 aa14.36□□□□□ -0.11
PSPC1-201ENST00000338910 IGFL4Q6B9Z1 124 aa14.36□□□□□ -0.11
PSPC1-201ENST00000338910 HIST1H4GQ99525 98 aa14.36□□□□□ -0.11
PSPC1-201ENST00000338910 TENM4Q6N022 2769 aa14.36□□□□□ -0.11
PSPC1-201ENST00000338910 CSPG4Q6UVK1 2322 aa14.36□□□□□ -0.11
PSPC1-201ENST00000338910 A0A087WX48 190 aa14.36□□□□□ -0.11
PSPC1-201ENST00000338910 MSMBP08118 114 aa14.36□□□□□ -0.11
PSPC1-201ENST00000338910 SMAD5-AS1Q9Y6J3 95 aa14.36□□□□□ -0.11
PSPC1-201ENST00000338910 NBPF19A0A087WUL8 3843 aa14.35□□□□□ -0.11
PSPC1-201ENST00000338910 CLEC3BP05452 202 aa14.35□□□□□ -0.11
PSPC1-201ENST00000338910 MYOZ3Q8TDC0 251 aa14.35□□□□□ -0.11
PSPC1-201ENST00000338910 LINC00527Q9UJ94 153 aa14.35□□□□□ -0.11
PSPC1-201ENST00000338910 PPIFP30405 207 aaKnown RBP14.35□□□□□ -0.11
PSPC1-201ENST00000338910 CKS1BP61024 79 aa14.35□□□□□ -0.11
PSPC1-201ENST00000338910 ATP5G2Q06055 141 aa14.35□□□□□ -0.11
PSPC1-201ENST00000338910 KRTAP10-9P60411 292 aa14.34□□□□□ -0.11
PSPC1-201ENST00000338910 LINC01619G3V211 115 aa14.34□□□□□ -0.11
PSPC1-201ENST00000338910 LAGE3Q14657 143 aa14.34□□□□□ -0.11
PSPC1-201ENST00000338910 PLNP26678 52 aa14.33□□□□□ -0.12
PSPC1-201ENST00000338910 NRACQ8N912 160 aa14.33□□□□□ -0.12
PSPC1-201ENST00000338910 HIF1ANQ9NWT6 349 aa14.33□□□□□ -0.12
PSPC1-201ENST00000338910 SCGB2A1O75556 95 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms