RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
PCDH8-201ENST00000338862 KLHL30-AS1Q8NEE0 82 aa10.98□□□□□ -0.65
PCDH8-201ENST00000338862 PIEZO1Q92508 2521 aa10.98□□□□□ -0.65
PCDH8-201ENST00000338862 CCDC168Q8NDH2 2452 aa10.98□□□□□ -0.65
PCDH8-201ENST00000338862 SRSF1Q07955 248 aaKnown RBP eCLIP10.98□□□□□ -0.65
PCDH8-201ENST00000338862 ODF1Q14990 250 aa10.98□□□□□ -0.65
PCDH8-201ENST00000338862 A0A087WWL8 130 aa10.98□□□□□ -0.65
PCDH8-201ENST00000338862 CIDEAO60543 219 aa10.98□□□□□ -0.65
PCDH8-201ENST00000338862 RPL39LQ96EH5 51 aaKnown RBP10.98□□□□□ -0.65
PCDH8-201ENST00000338862 KAAG1Q9UBP8 84 aa10.97□□□□□ -0.65
PCDH8-201ENST00000338862 G3V4G9 280 aa10.97□□□□□ -0.65
PCDH8-201ENST00000338862 PRSS2P07478 247 aa10.97□□□□□ -0.65
PCDH8-201ENST00000338862 HLA-DRB4P13762 266 aa10.97□□□□□ -0.65
PCDH8-201ENST00000338862 OR10J6PQ8NGY7 276 aa10.97□□□□□ -0.65
PCDH8-201ENST00000338862 HLA-DRB4X5D2U9 266 aa10.97□□□□□ -0.65
PCDH8-201ENST00000338862 PDE6HQ13956 83 aa10.97□□□□□ -0.65
PCDH8-201ENST00000338862 PRO3102Q9H379 93 aa10.97□□□□□ -0.65
PCDH8-201ENST00000338862 CEND1Q8N111 149 aa10.96□□□□□ -0.65
PCDH8-201ENST00000338862 ZNF292O60281 2723 aa10.96□□□□□ -0.65
PCDH8-201ENST00000338862 HOXA3O43365 443 aaPredicted RBP10.96□□□□□ -0.65
PCDH8-201ENST00000338862 LINC01549A6NIU2 74 aa10.96□□□□□ -0.66
PCDH8-201ENST00000338862 CRYGBP07316 175 aa10.96□□□□□ -0.66
PCDH8-201ENST00000338862 SLC25A16P16260 332 aa10.96□□□□□ -0.66
PCDH8-201ENST00000338862 LINC00477Q96M19 166 aa10.96□□□□□ -0.66
PCDH8-201ENST00000338862 C12orf74Q32Q52 190 aa10.95□□□□□ -0.66
PCDH8-201ENST00000338862 PIP4P2Q8N4L2 257 aa10.95□□□□□ -0.66
PCDH8-201ENST00000338862 RAX2Q96IS3 184 aa10.95□□□□□ -0.66
PCDH8-201ENST00000338862 IGLV11-55A0A075B6I3 123 aa10.95□□□□□ -0.66
PCDH8-201ENST00000338862 PIP4P1Q86T03 277 aa10.95□□□□□ -0.66
PCDH8-201ENST00000338862 PTH2Q96A98 100 aa10.95□□□□□ -0.66
PCDH8-201ENST00000338862 MYO18BQ8IUG5 2567 aa10.95□□□□□ -0.66
PCDH8-201ENST00000338862 C8orf86Q6ZUL3 223 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 SMAD5-AS1Q9Y6J3 95 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 IGKV3D-20A0A0C4DH25 116 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 GAGE12HA6NDE8 117 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 GNRH2O43555 120 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 INSL3P51460 131 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 NPC2P61916 151 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 IGFL3Q6UXB1 125 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 DPF1Q92782 380 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 SAA4P35542 130 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 EEF1AKMT3Q96AZ1 226 aa10.94□□□□□ -0.66
PCDH8-201ENST00000338862 WI2-2373I1.2A0A1W2PRP0 233 aa10.93□□□□□ -0.66
PCDH8-201ENST00000338862 IGLL5B9A064 214 aa10.93□□□□□ -0.66
PCDH8-201ENST00000338862 Q8N8P6 123 aa10.93□□□□□ -0.66
PCDH8-201ENST00000338862 C11orf21Q9P2W6 132 aa10.93□□□□□ -0.66
PCDH8-201ENST00000338862 IGHV7-81A0A0B4J1V7 117 aa10.93□□□□□ -0.66
PCDH8-201ENST00000338862 PRTN3P24158 256 aa10.93□□□□□ -0.66
PCDH8-201ENST00000338862 ASIPP42127 132 aa10.93□□□□□ -0.66
PCDH8-201ENST00000338862 RNF185Q96GF1 192 aa10.93□□□□□ -0.66
PCDH8-201ENST00000338862 SRSF8Q9BRL6 282 aaKnown RBP10.93□□□□□ -0.66
PCDH8-201ENST00000338862 ZNF56Q15929 161 aa10.92□□□□□ -0.66
PCDH8-201ENST00000338862 C2orf66Q6UXQ4 117 aa10.92□□□□□ -0.66
PCDH8-201ENST00000338862 ZNF493Q6ZR52 646 aa10.92□□□□□ -0.66
PCDH8-201ENST00000338862 C1orf122Q6ZSJ8 110 aa10.92□□□□□ -0.66
PCDH8-201ENST00000338862 PRADC1Q9BSG0 188 aa10.92□□□□□ -0.66
PCDH8-201ENST00000338862 IGHV3-73A0A0B4J1V6 119 aa10.92□□□□□ -0.66
PCDH8-201ENST00000338862 CEACAM4O75871 244 aa10.92□□□□□ -0.66
PCDH8-201ENST00000338862 CD7P09564 240 aa10.91□□□□□ -0.66
PCDH8-201ENST00000338862 H7C1H1 209 aa10.91□□□□□ -0.66
PCDH8-201ENST00000338862 NDUFS8O00217 210 aa10.91□□□□□ -0.66
PCDH8-201ENST00000338862 PAX8Q06710 450 aa10.91□□□□□ -0.66
PCDH8-201ENST00000338862 C8orf31Q8N9H6 132 aa10.91□□□□□ -0.66
PCDH8-201ENST00000338862 Q8NA96 180 aa10.91□□□□□ -0.66
PCDH8-201ENST00000338862 ZFP36P26651 326 aaKnown RBP10.9□□□□□ -0.66
PCDH8-201ENST00000338862 KHDC1LQ5JSQ8 128 aa10.9□□□□□ -0.66
PCDH8-201ENST00000338862 SYT8Q8NBV8 401 aa10.9□□□□□ -0.66
PCDH8-201ENST00000338862 RNF5Q99942 180 aa10.9□□□□□ -0.66
PCDH8-201ENST00000338862 JPT2Q9H910 190 aa10.9□□□□□ -0.66
PCDH8-201ENST00000338862 TRAV2A0A0B4J234 112 aa10.9□□□□□ -0.66
PCDH8-201ENST00000338862 TRAV12-3A0A0B4J271 114 aa10.9□□□□□ -0.66
PCDH8-201ENST00000338862 SUMO2P61956 95 aaKnown RBP10.9□□□□□ -0.66
PCDH8-201ENST00000338862 ANXA2RQ3ZCQ2 193 aa10.9□□□□□ -0.66
PCDH8-201ENST00000338862 SLC50A1Q9BRV3 221 aa10.9□□□□□ -0.66
PCDH8-201ENST00000338862 BUB3O43684 328 aa10.89□□□□□ -0.67
PCDH8-201ENST00000338862 HERVK_113P61574 105 aa10.89□□□□□ -0.67
PCDH8-201ENST00000338862 UFSP1Q6NVU6 142 aa10.89□□□□□ -0.67
PCDH8-201ENST00000338862 FAM159AQ6UWV7 190 aa10.89□□□□□ -0.67
PCDH8-201ENST00000338862 C20orf78Q9BR46 151 aa10.89□□□□□ -0.67
PCDH8-201ENST00000338862 A0A0U1RRA0 63 aa10.89□□□□□ -0.67
PCDH8-201ENST00000338862 CKS1BP61024 79 aa10.89□□□□□ -0.67
PCDH8-201ENST00000338862 BPESC1Q9GZL8 116 aa10.89□□□□□ -0.67
PCDH8-201ENST00000338862 A0A1B0GV72 72 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 ADARB2-AS1A8MUL3 147 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 IGLC6P0CF74 106 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 CDSNQ15517 529 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 TMEM238LA0A1B0GVL6 79 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 PRSS29PA6NIE9 313 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 A6NJY4 79 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 SIVA1O15304 175 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 IGHV4-39P01824 125 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 SMIM2Q9BVW6 85 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 HHLA3Q9XRX5 114 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 TRAV12-2A0A075B6T6 113 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
PCDH8-201ENST00000338862 FOXI2Q6ZQN5 318 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 DUX5Q96PT3 197 aa10.88□□□□□ -0.67
PCDH8-201ENST00000338862 SPAG8Q99932 426 aaPredicted RBP10.88□□□□□ -0.67
PCDH8-201ENST00000338862 A0A087WX48 190 aa10.87□□□□□ -0.67
PCDH8-201ENST00000338862 MYMXA0A1B0GTQ4 84 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms